RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
CHRNA3-201ENST00000326828 EXOSC9Q06265 439 aaKnown RBP18■□□□□ 0.47
CHRNA3-201ENST00000326828 EIF2AK4Q9P2K8 1649 aaKnown RBP18■□□□□ 0.47
CHRNA3-201ENST00000326828 GAS2L3Q86XJ1 694 aa18■□□□□ 0.47
CHRNA3-201ENST00000326828 ABCA8O94911 1581 aa18■□□□□ 0.47
CHRNA3-201ENST00000326828 NUP160Q12769 1436 aa17.99■□□□□ 0.47
CHRNA3-201ENST00000326828 ZMYND15Q9H091 742 aa17.99■□□□□ 0.47
CHRNA3-201ENST00000326828 KIF3BO15066 747 aa17.99■□□□□ 0.47
CHRNA3-201ENST00000326828 TNPO1Q92973 898 aaKnown RBP17.98■□□□□ 0.47
CHRNA3-201ENST00000326828 NSD3Q9BZ95 1437 aa17.98■□□□□ 0.47
CHRNA3-201ENST00000326828 ARID3AQ99856 593 aa17.98■□□□□ 0.47
CHRNA3-201ENST00000326828 TRIM27P14373 513 aa17.97■□□□□ 0.47
CHRNA3-201ENST00000326828 NCLP19338 710 aaKnown RBP17.96■□□□□ 0.47
CHRNA3-201ENST00000326828 CFAP53Q96M91 514 aa17.96■□□□□ 0.47
CHRNA3-201ENST00000326828 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
CHRNA3-201ENST00000326828 ARHGEF5Q12774 1597 aa17.96■□□□□ 0.47
CHRNA3-201ENST00000326828 DDX11L8A8MPP1 907 aa17.96■□□□□ 0.47
CHRNA3-201ENST00000326828 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
CHRNA3-201ENST00000326828 C1orf115Q9H7X2 142 aa17.96■□□□□ 0.47
CHRNA3-201ENST00000326828 NOB1Q9ULX3 412 aaKnown RBP17.96■□□□□ 0.47
CHRNA3-201ENST00000326828 ABCC2Q92887 1545 aa17.95■□□□□ 0.46
CHRNA3-201ENST00000326828 SPAG9O60271 1321 aaKnown RBP17.95■□□□□ 0.46
CHRNA3-201ENST00000326828 NINLQ9Y2I6 1382 aa17.95■□□□□ 0.46
CHRNA3-201ENST00000326828 TMEM57Q8N5G2 664 aa17.94■□□□□ 0.46
CHRNA3-201ENST00000326828 CDC42BPBQ9Y5S2 1711 aa17.94■□□□□ 0.46
CHRNA3-201ENST00000326828 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
CHRNA3-201ENST00000326828 SYNMO15061 1565 aa17.93■□□□□ 0.46
CHRNA3-201ENST00000326828 CD2BP2O95400 341 aaKnown RBP17.93■□□□□ 0.46
CHRNA3-201ENST00000326828 EFCAB2Q5VUJ9 269 aa17.93■□□□□ 0.46
CHRNA3-201ENST00000326828 WDR63Q8IWG1 891 aa17.93■□□□□ 0.46
CHRNA3-201ENST00000326828 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
CHRNA3-201ENST00000326828 ANKRD45Q5TZF3 282 aa17.91■□□□□ 0.46
CHRNA3-201ENST00000326828 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
CHRNA3-201ENST00000326828 ELL2O00472 640 aaPredicted RBP17.91■□□□□ 0.46
CHRNA3-201ENST00000326828 LAMC1P11047 1609 aa17.9■□□□□ 0.46
CHRNA3-201ENST00000326828 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
CHRNA3-201ENST00000326828 GBP4Q96PP9 640 aa17.9■□□□□ 0.46
CHRNA3-201ENST00000326828 NPC1L1Q9UHC9 1359 aa17.9■□□□□ 0.46
CHRNA3-201ENST00000326828 ERVK-7P63135 1459 aa17.89■□□□□ 0.46
CHRNA3-201ENST00000326828 SSFA2P28290 1259 aa17.89■□□□□ 0.46
CHRNA3-201ENST00000326828 RBM10P98175 930 aaKnown RBP17.89■□□□□ 0.46
CHRNA3-201ENST00000326828 ATF7IPQ6VMQ6 1270 aa17.89■□□□□ 0.45
CHRNA3-201ENST00000326828 ZNF692Q9BU19 519 aaPredicted RBP17.89■□□□□ 0.45
CHRNA3-201ENST00000326828 TRAPPC8Q9Y2L5 1435 aa17.89■□□□□ 0.45
CHRNA3-201ENST00000326828 DDX19BQ9UMR2 479 aa17.89■□□□□ 0.45
CHRNA3-201ENST00000326828 TTC37Q6PGP7 1564 aa17.88■□□□□ 0.45
CHRNA3-201ENST00000326828 GGNBP2Q9H3C7 697 aa17.88■□□□□ 0.45
CHRNA3-201ENST00000326828 VIRMAQ69YN4 1812 aaKnown RBP17.88■□□□□ 0.45
CHRNA3-201ENST00000326828 MADDQ8WXG6 1647 aa17.88■□□□□ 0.45
CHRNA3-201ENST00000326828 UNC13BO14795 1591 aa17.87■□□□□ 0.45
CHRNA3-201ENST00000326828 CABP2Q9NPB3 220 aa17.87■□□□□ 0.45
CHRNA3-201ENST00000326828 DDX49Q9Y6V7 483 aaKnown RBP17.87■□□□□ 0.45
CHRNA3-201ENST00000326828 RRP9O43818 475 aaKnown RBP17.87■□□□□ 0.45
CHRNA3-201ENST00000326828 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
CHRNA3-201ENST00000326828 UGGT1Q9NYU2 1555 aa17.86■□□□□ 0.45
CHRNA3-201ENST00000326828 IQGAP3Q86VI3 1631 aa17.86■□□□□ 0.45
CHRNA3-201ENST00000326828 KIAA1211Q6ZU35 1233 aa17.86■□□□□ 0.45
CHRNA3-201ENST00000326828 FOXD4L5Q5VV16 416 aaPredicted RBP17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 FOXD4L4Q8WXT5 416 aaPredicted RBP17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 ANP32BQ92688 251 aaKnown RBP17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 STK26Q9P289 416 aa17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 APBB1O00213 710 aa17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 NASPP49321 788 aaPredicted RBP17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 RIPK4P57078 832 aa17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 AAMPQ13685 434 aa17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 RTEL1-TNFRSF6BF6WH68 1400 aa17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 ATP10AO60312 1499 aa17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 DUOX2Q9NRD8 1548 aa17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 PREX2Q70Z35 1606 aa17.85■□□□□ 0.45
CHRNA3-201ENST00000326828 RNF17Q9BXT8 1623 aaKnown RBP17.84■□□□□ 0.45
CHRNA3-201ENST00000326828 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.45
CHRNA3-201ENST00000326828 MYOM1P52179 1685 aa17.83■□□□□ 0.45
CHRNA3-201ENST00000326828 FBLN1P23142 703 aa17.83■□□□□ 0.44
CHRNA3-201ENST00000326828 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.44
CHRNA3-201ENST00000326828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.83■□□□□ 0.44
CHRNA3-201ENST00000326828 KDM5AP29375 1690 aaKnown RBP17.83■□□□□ 0.44
CHRNA3-201ENST00000326828 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
CHRNA3-201ENST00000326828 IQGAP1P46940 1657 aa17.82■□□□□ 0.44
CHRNA3-201ENST00000326828 TMPOP42166 694 aaKnown RBP17.82■□□□□ 0.44
CHRNA3-201ENST00000326828 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
CHRNA3-201ENST00000326828 MCTP1Q6DN14 999 aa17.82■□□□□ 0.44
CHRNA3-201ENST00000326828 TPRNQ4KMQ1 711 aa17.81■□□□□ 0.44
CHRNA3-201ENST00000326828 SMC5Q8IY18 1101 aa17.81■□□□□ 0.44
CHRNA3-201ENST00000326828 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
CHRNA3-201ENST00000326828 GOLGA6L22H0YM25 854 aa17.81■□□□□ 0.44
CHRNA3-201ENST00000326828 MSNP26038 577 aaKnown RBP17.81■□□□□ 0.44
CHRNA3-201ENST00000326828 CAVIN1Q6NZI2 390 aaKnown RBP17.81■□□□□ 0.44
CHRNA3-201ENST00000326828 CHAMP1Q96JM3 812 aa17.81■□□□□ 0.44
CHRNA3-201ENST00000326828 RAB3GAP1Q15042 981 aa17.8■□□□□ 0.44
CHRNA3-201ENST00000326828 ZBTB40Q9NUA8 1239 aa17.8■□□□□ 0.44
CHRNA3-201ENST00000326828 FAM13BQ9NYF5 915 aa17.8■□□□□ 0.44
CHRNA3-201ENST00000326828 KANK1Q14678 1352 aa17.8■□□□□ 0.44
CHRNA3-201ENST00000326828 SCAPERQ9BY12 1400 aa17.8■□□□□ 0.44
CHRNA3-201ENST00000326828 SRPK2P78362 688 aaKnown RBP17.79■□□□□ 0.44
CHRNA3-201ENST00000326828 TBC1D9Q6ZT07 1266 aa17.79■□□□□ 0.44
CHRNA3-201ENST00000326828 NUCB1Q02818 461 aa17.79■□□□□ 0.44
CHRNA3-201ENST00000326828 TRIM35Q9UPQ4 493 aa17.79■□□□□ 0.44
CHRNA3-201ENST00000326828 K7ELQ4 463 aaPredicted RBP17.79■□□□□ 0.44
CHRNA3-201ENST00000326828 GGT6Q6P531 493 aa17.79■□□□□ 0.44
CHRNA3-201ENST00000326828 R3HCC1Q9Y3T6 440 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms