RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 DUSP27Q5VZP5 1158 aa21.15■□□□□ 0.98
USHBP1-202ENST00000324554 ZBTB47Q9UFB7 747 aaPredicted RBP21.15■□□□□ 0.98
USHBP1-202ENST00000324554 CRBNQ96SW2 442 aa21.14■□□□□ 0.97
USHBP1-202ENST00000324554 CARD14Q9BXL6 1004 aa21.14■□□□□ 0.97
USHBP1-202ENST00000324554 PDE4AP27815 886 aa21.13■□□□□ 0.97
USHBP1-202ENST00000324554 DEKP35659 375 aaKnown RBP21.13■□□□□ 0.97
USHBP1-202ENST00000324554 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
USHBP1-202ENST00000324554 ZMYM3Q14202 1370 aa21.12■□□□□ 0.97
USHBP1-202ENST00000324554 NEXMIFQ5QGS0 1516 aa21.11■□□□□ 0.97
USHBP1-202ENST00000324554 GOLGA2Q08379 1002 aa21.11■□□□□ 0.97
USHBP1-202ENST00000324554 STK26Q9P289 416 aa21.11■□□□□ 0.97
USHBP1-202ENST00000324554 CENPJQ9HC77 1338 aaPredicted RBP21.11■□□□□ 0.97
USHBP1-202ENST00000324554 NPM2Q86SE8 214 aaKnown RBP21.1■□□□□ 0.97
USHBP1-202ENST00000324554 BACH2Q9BYV9 841 aa21.1■□□□□ 0.97
USHBP1-202ENST00000324554 SAFB2Q14151 953 aaKnown RBP eCLIP21.1■□□□□ 0.97
USHBP1-202ENST00000324554 C20orf194Q5TEA3 1177 aa21.1■□□□□ 0.97
USHBP1-202ENST00000324554 CEBPAP49715 358 aaPredicted RBP21.09■□□□□ 0.97
USHBP1-202ENST00000324554 SKAP1Q86WV1 359 aa21.09■□□□□ 0.97
USHBP1-202ENST00000324554 MS4A1P11836 297 aa21.09■□□□□ 0.97
USHBP1-202ENST00000324554 TMEM131LA2VDJ0 1609 aa21.09■□□□□ 0.97
USHBP1-202ENST00000324554 CCDC146Q8IYE0 955 aa21.08■□□□□ 0.97
USHBP1-202ENST00000324554 ADGRB1O14514 1584 aa21.08■□□□□ 0.97
USHBP1-202ENST00000324554 SLFN5Q08AF3 891 aa21.07■□□□□ 0.96
USHBP1-202ENST00000324554 QRICH2Q9H0J4 1663 aa21.05■□□□□ 0.96
USHBP1-202ENST00000324554 TRMT2AQ8IZ69 625 aaKnown RBP21.05■□□□□ 0.96
USHBP1-202ENST00000324554 APAF1O14727 1248 aa21.04■□□□□ 0.96
USHBP1-202ENST00000324554 NSD3Q9BZ95 1437 aa21.01■□□□□ 0.95
USHBP1-202ENST00000324554 POLR3AO14802 1390 aaPredicted RBP21.01■□□□□ 0.95
USHBP1-202ENST00000324554 SPINK5Q9NQ38 1064 aaPredicted RBP21.01■□□□□ 0.95
USHBP1-202ENST00000324554 SPATA31D1Q6ZQQ2 1576 aa21■□□□□ 0.95
USHBP1-202ENST00000324554 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
USHBP1-202ENST00000324554 A2ML1A8K2U0 1454 aa20.99■□□□□ 0.95
USHBP1-202ENST00000324554 KDM2BQ8NHM5 1336 aa20.99■□□□□ 0.95
USHBP1-202ENST00000324554 NKTRP30414 1462 aaKnown RBP20.99■□□□□ 0.95
USHBP1-202ENST00000324554 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.98■□□□□ 0.95
USHBP1-202ENST00000324554 SLC12A5Q9H2X9 1139 aa20.98■□□□□ 0.95
USHBP1-202ENST00000324554 E9PSI1 815 aa20.96■□□□□ 0.95
USHBP1-202ENST00000324554 NGEFQ8N5V2 710 aa20.96■□□□□ 0.95
USHBP1-202ENST00000324554 MORC1Q86VD1 984 aa20.95■□□□□ 0.94
USHBP1-202ENST00000324554 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
USHBP1-202ENST00000324554 RIMS2Q9UQ26 1411 aa20.95■□□□□ 0.94
USHBP1-202ENST00000324554 SHPRHQ149N8 1683 aa20.95■□□□□ 0.94
USHBP1-202ENST00000324554 TNRQ92752 1358 aa20.94■□□□□ 0.94
USHBP1-202ENST00000324554 USP32Q8NFA0 1604 aa20.94■□□□□ 0.94
USHBP1-202ENST00000324554 DMRT2Q9Y5R5 561 aa20.94■□□□□ 0.94
USHBP1-202ENST00000324554 RTL5Q5HYW3 569 aaPredicted RBP20.94■□□□□ 0.94
USHBP1-202ENST00000324554 PRAM1Q96QH2 718 aa20.93■□□□□ 0.94
USHBP1-202ENST00000324554 ARHGEF28Q8N1W1 1705 aaKnown RBP20.93■□□□□ 0.94
USHBP1-202ENST00000324554 CENPQQ7L2Z9 268 aaPredicted RBP20.93■□□□□ 0.94
USHBP1-202ENST00000324554 CABP2Q9NPB3 220 aa20.93■□□□□ 0.94
USHBP1-202ENST00000324554 MINK1Q8N4C8 1332 aaPredicted RBP20.92■□□□□ 0.94
USHBP1-202ENST00000324554 TULP4Q9NRJ4 1543 aa20.91■□□□□ 0.94
USHBP1-202ENST00000324554 TNNT2P45379 298 aaPredicted RBP20.9■□□□□ 0.94
USHBP1-202ENST00000324554 POGKQ9P215 609 aa20.9■□□□□ 0.94
USHBP1-202ENST00000324554 LAS1LQ9Y4W2 734 aaKnown RBP20.9■□□□□ 0.94
USHBP1-202ENST00000324554 ALKQ9UM73 1620 aa20.9■□□□□ 0.94
USHBP1-202ENST00000324554 BCAR3O75815 825 aa20.89■□□□□ 0.94
USHBP1-202ENST00000324554 WWC1Q8IX03 1113 aa20.89■□□□□ 0.94
USHBP1-202ENST00000324554 CGNL1Q0VF96 1302 aa20.89■□□□□ 0.93
USHBP1-202ENST00000324554 PUS7Q96PZ0 661 aaKnown RBP20.89■□□□□ 0.93
USHBP1-202ENST00000324554 EVC2Q86UK5 1308 aa20.88■□□□□ 0.93
USHBP1-202ENST00000324554 WAPLQ7Z5K2 1190 aa20.88■□□□□ 0.93
USHBP1-202ENST00000324554 YTHDC2Q9H6S0 1430 aaKnown RBP20.88■□□□□ 0.93
USHBP1-202ENST00000324554 ANKRD36BQ8N2N9 1353 aa20.87■□□□□ 0.93
USHBP1-202ENST00000324554 IQSEC2Q5JU85 1478 aa20.87■□□□□ 0.93
USHBP1-202ENST00000324554 SRPK2P78362 688 aaKnown RBP20.86■□□□□ 0.93
USHBP1-202ENST00000324554 RUNDC1Q96C34 613 aa20.85■□□□□ 0.93
USHBP1-202ENST00000324554 PTPRMP28827 1452 aa20.85■□□□□ 0.93
USHBP1-202ENST00000324554 MTHFSP49914 203 aa20.84■□□□□ 0.93
USHBP1-202ENST00000324554 NSD2O96028 1365 aa20.83■□□□□ 0.93
USHBP1-202ENST00000324554 LTKP29376 864 aa20.83■□□□□ 0.93
USHBP1-202ENST00000324554 METP08581 1390 aa20.83■□□□□ 0.92
USHBP1-202ENST00000324554 NEFMP07197 916 aa20.82■□□□□ 0.92
USHBP1-202ENST00000324554 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
USHBP1-202ENST00000324554 C8orf34Q49A92 452 aa20.82■□□□□ 0.92
USHBP1-202ENST00000324554 TXNDC2Q86VQ3 553 aa20.82■□□□□ 0.92
USHBP1-202ENST00000324554 TCP11L2Q8N4U5 519 aa20.82■□□□□ 0.92
USHBP1-202ENST00000324554 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.82■□□□□ 0.92
USHBP1-202ENST00000324554 RRP7AQ9Y3A4 280 aaKnown RBP20.82■□□□□ 0.92
USHBP1-202ENST00000324554 NEUROD2Q15784 382 aa20.81■□□□□ 0.92
USHBP1-202ENST00000324554 DDRGK1Q96HY6 314 aa20.8■□□□□ 0.92
USHBP1-202ENST00000324554 C3P01024 1663 aa20.8■□□□□ 0.92
USHBP1-202ENST00000324554 TMEM2Q9UHN6 1383 aa20.8■□□□□ 0.92
USHBP1-202ENST00000324554 CFAP53Q96M91 514 aa20.8■□□□□ 0.92
USHBP1-202ENST00000324554 FER1L4A9Z1Z3 1794 aa20.8■□□□□ 0.92
USHBP1-202ENST00000324554 PDE3AQ14432 1141 aa20.79■□□□□ 0.92
USHBP1-202ENST00000324554 FAM161AQ3B820 660 aa20.79■□□□□ 0.92
USHBP1-202ENST00000324554 NINLQ9Y2I6 1382 aa20.79■□□□□ 0.92
USHBP1-202ENST00000324554 UBR1Q8IWV7 1749 aa20.79■□□□□ 0.92
USHBP1-202ENST00000324554 SLC26A8Q96RN1 970 aa20.78■□□□□ 0.92
USHBP1-202ENST00000324554 RGS3P49796 1198 aa20.77■□□□□ 0.92
USHBP1-202ENST00000324554 HDGFP51858 240 aaKnown RBP20.77■□□□□ 0.92
USHBP1-202ENST00000324554 CDK19Q9BWU1 502 aa20.77■□□□□ 0.92
USHBP1-202ENST00000324554 A0A1W2PP64 1363 aa20.76■□□□□ 0.91
USHBP1-202ENST00000324554 WDR63Q8IWG1 891 aa20.76■□□□□ 0.91
USHBP1-202ENST00000324554 USP35Q9P2H5 1018 aa20.76■□□□□ 0.91
USHBP1-202ENST00000324554 ABCC11Q96J66 1382 aa20.76■□□□□ 0.91
USHBP1-202ENST00000324554 NRXN3Q9Y4C0 1643 aa20.76■□□□□ 0.91
USHBP1-202ENST00000324554 PPM1GO15355 546 aaPredicted RBP20.76■□□□□ 0.91
USHBP1-202ENST00000324554 SLC4A3P48751 1232 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms