RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 MEX3CQ5U5Q3 659 aaKnown RBP18.44■□□□□ 0.54
TPM3-204ENST00000323144 PXDNQ92626 1479 aa18.44■□□□□ 0.54
TPM3-204ENST00000323144 LRPPRCP42704 1394 aaKnown RBP18.43■□□□□ 0.54
TPM3-204ENST00000323144 ABCA3Q99758 1704 aa18.43■□□□□ 0.54
TPM3-204ENST00000323144 YTHDC2Q9H6S0 1430 aaKnown RBP18.42■□□□□ 0.54
TPM3-204ENST00000323144 NUTM2BA6NNL0 878 aaPredicted RBP18.42■□□□□ 0.54
TPM3-204ENST00000323144 NUTM2EB1AL46 878 aaPredicted RBP18.42■□□□□ 0.54
TPM3-204ENST00000323144 NUTM2AQ8IVF1 878 aaPredicted RBP18.42■□□□□ 0.54
TPM3-204ENST00000323144 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
TPM3-204ENST00000323144 ADGRB1O14514 1584 aa18.4■□□□□ 0.54
TPM3-204ENST00000323144 ADGRB2O60241 1585 aa18.4■□□□□ 0.54
TPM3-204ENST00000323144 ORAI2Q96SN7 254 aa18.4■□□□□ 0.54
TPM3-204ENST00000323144 STK26Q9P289 416 aa18.38■□□□□ 0.53
TPM3-204ENST00000323144 ARHGEF28Q8N1W1 1705 aaKnown RBP18.37■□□□□ 0.53
TPM3-204ENST00000323144 AFF2P51816 1311 aa18.37■□□□□ 0.53
TPM3-204ENST00000323144 RGS12O14924 1447 aa18.36■□□□□ 0.53
TPM3-204ENST00000323144 SOS2Q07890 1332 aaPredicted RBP18.36■□□□□ 0.53
TPM3-204ENST00000323144 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
TPM3-204ENST00000323144 DLC1Q96QB1 1528 aa18.36■□□□□ 0.53
TPM3-204ENST00000323144 CDK12Q9NYV4 1490 aaPredicted RBP18.35■□□□□ 0.53
TPM3-204ENST00000323144 ABCC11Q96J66 1382 aa18.35■□□□□ 0.53
TPM3-204ENST00000323144 WAPLQ7Z5K2 1190 aa18.35■□□□□ 0.53
TPM3-204ENST00000323144 LRRC59Q96AG4 307 aaKnown RBP18.34■□□□□ 0.53
TPM3-204ENST00000323144 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.34■□□□□ 0.53
TPM3-204ENST00000323144 ZNF772Q68DY9 489 aaPredicted RBP18.33■□□□□ 0.52
TPM3-204ENST00000323144 PLCH1Q4KWH8 1693 aa18.32■□□□□ 0.52
TPM3-204ENST00000323144 C8orf37Q96NL8 207 aa18.32■□□□□ 0.52
TPM3-204ENST00000323144 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
TPM3-204ENST00000323144 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
TPM3-204ENST00000323144 XPCQ01831 940 aaPredicted RBP18.3■□□□□ 0.52
TPM3-204ENST00000323144 ADAMTS2O95450 1211 aa18.29■□□□□ 0.52
TPM3-204ENST00000323144 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
TPM3-204ENST00000323144 NPHP3Q7Z494 1330 aa18.28■□□□□ 0.52
TPM3-204ENST00000323144 ESCO1Q5FWF5 840 aa18.28■□□□□ 0.52
TPM3-204ENST00000323144 CRYBG1Q9Y4K1 1723 aa18.28■□□□□ 0.52
TPM3-204ENST00000323144 ITSN1Q15811 1721 aa18.27■□□□□ 0.52
TPM3-204ENST00000323144 C14orf93Q9H972 538 aaKnown RBP18.27■□□□□ 0.52
TPM3-204ENST00000323144 ACIN1Q9UKV3 1341 aaKnown RBP18.26■□□□□ 0.51
TPM3-204ENST00000323144 ALS2Q96Q42 1657 aa18.26■□□□□ 0.51
TPM3-204ENST00000323144 TOPAZ1Q8N9V7 1692 aa18.25■□□□□ 0.51
TPM3-204ENST00000323144 KIAA1210Q9ULL0 1709 aa18.25■□□□□ 0.51
TPM3-204ENST00000323144 DHX57Q6P158 1386 aaKnown RBP18.25■□□□□ 0.51
TPM3-204ENST00000323144 TULP4Q9NRJ4 1543 aa18.24■□□□□ 0.51
TPM3-204ENST00000323144 RXRBP28702 533 aa18.24■□□□□ 0.51
TPM3-204ENST00000323144 ATRNO75882 1429 aa18.23■□□□□ 0.51
TPM3-204ENST00000323144 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
TPM3-204ENST00000323144 FOXO3O43524 673 aa18.23■□□□□ 0.51
TPM3-204ENST00000323144 SAFB2Q14151 953 aaKnown RBP eCLIP18.23■□□□□ 0.51
TPM3-204ENST00000323144 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
TPM3-204ENST00000323144 GLI3P10071 1580 aa18.22■□□□□ 0.51
TPM3-204ENST00000323144 PRAM1Q96QH2 718 aa18.22■□□□□ 0.51
TPM3-204ENST00000323144 NWD2Q9ULI1 1742 aa18.22■□□□□ 0.51
TPM3-204ENST00000323144 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
TPM3-204ENST00000323144 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
TPM3-204ENST00000323144 BRWD3Q6RI45 1802 aa18.19■□□□□ 0.5
TPM3-204ENST00000323144 NGLY1Q96IV0 654 aa18.19■□□□□ 0.5
TPM3-204ENST00000323144 PHRF1Q9P1Y6 1649 aaKnown RBP18.19■□□□□ 0.5
TPM3-204ENST00000323144 UPF1Q92900 1129 aaKnown RBP eCLIP18.18■□□□□ 0.5
TPM3-204ENST00000323144 ATP7BP35670 1465 aa18.18■□□□□ 0.5
TPM3-204ENST00000323144 SIRT1Q96EB6 747 aa18.17■□□□□ 0.5
TPM3-204ENST00000323144 QTRT2Q9H974 415 aaKnown RBP18.17■□□□□ 0.5
TPM3-204ENST00000323144 SLIT2O94813 1529 aa18.17■□□□□ 0.5
TPM3-204ENST00000323144 SPATA31A3Q5VYP0 1347 aa18.17■□□□□ 0.5
TPM3-204ENST00000323144 QRICH2Q9H0J4 1663 aa18.16■□□□□ 0.5
TPM3-204ENST00000323144 RBM6P78332 1123 aaKnown RBP18.16■□□□□ 0.5
TPM3-204ENST00000323144 USP21Q9UK80 565 aa18.16■□□□□ 0.5
TPM3-204ENST00000323144 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
TPM3-204ENST00000323144 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
TPM3-204ENST00000323144 KDM2AQ9Y2K7 1162 aa18.15■□□□□ 0.5
TPM3-204ENST00000323144 FNBP4Q8N3X1 1017 aaPredicted RBP18.14■□□□□ 0.49
TPM3-204ENST00000323144 HIRIP3Q9BW71 556 aaPredicted RBP18.14■□□□□ 0.49
TPM3-204ENST00000323144 PHF8Q9UPP1 1060 aa18.14■□□□□ 0.49
TPM3-204ENST00000323144 EP400Q96L91 3159 aa18.14■□□□□ 0.49
TPM3-204ENST00000323144 MINK1Q8N4C8 1332 aaPredicted RBP18.14■□□□□ 0.49
TPM3-204ENST00000323144 PRR36Q9H6K5 1346 aa18.14■□□□□ 0.49
TPM3-204ENST00000323144 RALGAPBQ86X10 1494 aa18.13■□□□□ 0.49
TPM3-204ENST00000323144 POGKQ9P215 609 aa18.12■□□□□ 0.49
TPM3-204ENST00000323144 SBNO1A3KN83 1393 aa18.12■□□□□ 0.49
TPM3-204ENST00000323144 TRPM1Q7Z4N2 1603 aa18.12■□□□□ 0.49
TPM3-204ENST00000323144 COL14A1Q05707 1796 aaKnown RBP18.12■□□□□ 0.49
TPM3-204ENST00000323144 KRT28Q7Z3Y7 464 aa18.11■□□□□ 0.49
TPM3-204ENST00000323144 TRPC5Q9UL62 973 aaPredicted RBP18.11■□□□□ 0.49
TPM3-204ENST00000323144 EIF3AQ14152 1382 aaKnown RBP18.1■□□□□ 0.49
TPM3-204ENST00000323144 PLEKHG5O94827 1062 aa18.09■□□□□ 0.49
TPM3-204ENST00000323144 HRCP23327 699 aa18.09■□□□□ 0.49
TPM3-204ENST00000323144 PMFBP1Q8TBY8 1022 aa18.09■□□□□ 0.49
TPM3-204ENST00000323144 ARHGEF10O15013 1369 aa18.08■□□□□ 0.49
TPM3-204ENST00000323144 ATAD2Q6PL18 1390 aa18.08■□□□□ 0.49
TPM3-204ENST00000323144 CABLES1Q8TDN4 633 aa18.08■□□□□ 0.48
TPM3-204ENST00000323144 NRKQ7Z2Y5 1582 aa18.08■□□□□ 0.48
TPM3-204ENST00000323144 WASLO00401 505 aaPredicted RBP18.03■□□□□ 0.48
TPM3-204ENST00000323144 LMOD2Q6P5Q4 547 aa18.03■□□□□ 0.48
TPM3-204ENST00000323144 THSD7AQ9UPZ6 1657 aa18.03■□□□□ 0.48
TPM3-204ENST00000323144 HAP1P54257 671 aaPredicted RBP18.02■□□□□ 0.48
TPM3-204ENST00000323144 PSME1Q06323 249 aa18.02■□□□□ 0.48
TPM3-204ENST00000323144 UNC5CLQ8IV45 518 aa18.01■□□□□ 0.47
TPM3-204ENST00000323144 GPRASP1Q5JY77 1395 aa18.01■□□□□ 0.47
TPM3-204ENST00000323144 GJD4Q96KN9 370 aaPredicted RBP18■□□□□ 0.47
TPM3-204ENST00000323144 STAC3Q96MF2 364 aa17.99■□□□□ 0.47
TPM3-204ENST00000323144 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms