RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 SIRT1Q96EB6 747 aa33.64■■■□□ 2.98
TNFSF12-202ENST00000322272 BRINP3Q76B58 766 aa33.63■■■□□ 2.97
TNFSF12-202ENST00000322272 ZNF316A6NFI3 1004 aaPredicted RBP33.61■■■□□ 2.97
TNFSF12-202ENST00000322272 TRAK1Q9UPV9 953 aa33.61■■■□□ 2.97
TNFSF12-202ENST00000322272 PRAM1Q96QH2 718 aa33.59■■■□□ 2.97
TNFSF12-202ENST00000322272 SAFB2Q14151 953 aaKnown RBP eCLIP33.57■■■□□ 2.96
TNFSF12-202ENST00000322272 C1orf167Q5SNV9 1468 aa33.57■■■□□ 2.96
TNFSF12-202ENST00000322272 POGKQ9P215 609 aa33.56■■■□□ 2.96
TNFSF12-202ENST00000322272 DLC1Q96QB1 1528 aa33.55■■■□□ 2.96
TNFSF12-202ENST00000322272 CDC42BPGQ6DT37 1551 aa33.55■■■□□ 2.96
TNFSF12-202ENST00000322272 PHLPP1O60346 1717 aa33.54■■■□□ 2.96
TNFSF12-202ENST00000322272 NBPF1Q3BBV0 1214 aa33.5■■■□□ 2.95
TNFSF12-202ENST00000322272 ORAI2Q96SN7 254 aa33.5■■■□□ 2.95
TNFSF12-202ENST00000322272 DISP3Q9P2K9 1392 aa33.5■■■□□ 2.95
TNFSF12-202ENST00000322272 AHDC1Q5TGY3 1603 aaPredicted RBP33.5■■■□□ 2.95
TNFSF12-202ENST00000322272 NUTM2FA1L443 756 aa33.49■■■□□ 2.95
TNFSF12-202ENST00000322272 KIAA1210Q9ULL0 1709 aa33.49■■■□□ 2.95
TNFSF12-202ENST00000322272 COL16A1Q07092 1604 aaPredicted RBP33.47■■■□□ 2.95
TNFSF12-202ENST00000322272 NBPF8Q3BBV2 869 aa33.45■■■□□ 2.95
TNFSF12-202ENST00000322272 DDX17Q92841 729 aaKnown RBP33.45■■■□□ 2.95
TNFSF12-202ENST00000322272 ESCO1Q5FWF5 840 aa33.44■■■□□ 2.94
TNFSF12-202ENST00000322272 RALGAPBQ86X10 1494 aa33.43■■■□□ 2.94
TNFSF12-202ENST00000322272 MED1Q15648 1581 aaPredicted RBP33.43■■■□□ 2.94
TNFSF12-202ENST00000322272 JCADQ9P266 1359 aa33.42■■■□□ 2.94
TNFSF12-202ENST00000322272 TRPM1Q7Z4N2 1603 aa33.41■■■□□ 2.94
TNFSF12-202ENST00000322272 MINK1Q8N4C8 1332 aaPredicted RBP33.41■■■□□ 2.94
TNFSF12-202ENST00000322272 HIRIP3Q9BW71 556 aaPredicted RBP33.41■■■□□ 2.94
TNFSF12-202ENST00000322272 NHSL1Q5SYE7 1610 aa33.4■■■□□ 2.94
TNFSF12-202ENST00000322272 FMN2Q9NZ56 1722 aa33.39■■■□□ 2.94
TNFSF12-202ENST00000322272 ARHGEF28Q8N1W1 1705 aaKnown RBP33.38■■■□□ 2.93
TNFSF12-202ENST00000322272 ADGRB2O60241 1585 aa33.34■■■□□ 2.93
TNFSF12-202ENST00000322272 LRRC59Q96AG4 307 aaKnown RBP33.33■■■□□ 2.93
TNFSF12-202ENST00000322272 ROCK2O75116 1388 aaKnown RBP33.31■■■□□ 2.92
TNFSF12-202ENST00000322272 FOXO3O43524 673 aa33.3■■■□□ 2.92
TNFSF12-202ENST00000322272 SOS2Q07890 1332 aaPredicted RBP33.3■■■□□ 2.92
TNFSF12-202ENST00000322272 NPHP3Q7Z494 1330 aa33.3■■■□□ 2.92
TNFSF12-202ENST00000322272 WASLO00401 505 aaPredicted RBP33.29■■■□□ 2.92
TNFSF12-202ENST00000322272 PHF23Q9BUL5 403 aaPredicted RBP33.29■■■□□ 2.92
TNFSF12-202ENST00000322272 SPATA31A6Q5VVP1 1343 aa33.27■■■□□ 2.92
TNFSF12-202ENST00000322272 EIF4G2P78344 907 aaKnown RBP eCLIP33.26■■■□□ 2.91
TNFSF12-202ENST00000322272 ANKARQ7Z5J8 1434 aa33.25■■■□□ 2.91
TNFSF12-202ENST00000322272 XPCQ01831 940 aaPredicted RBP33.25■■■□□ 2.91
TNFSF12-202ENST00000322272 PHF8Q9UPP1 1060 aa33.25■■■□□ 2.91
TNFSF12-202ENST00000322272 CENPJQ9HC77 1338 aaPredicted RBP33.25■■■□□ 2.91
TNFSF12-202ENST00000322272 SHPRHQ149N8 1683 aa33.24■■■□□ 2.91
TNFSF12-202ENST00000322272 EIF3AQ14152 1382 aaKnown RBP33.24■■■□□ 2.91
TNFSF12-202ENST00000322272 CARD11Q9BXL7 1154 aa33.22■■■□□ 2.91
TNFSF12-202ENST00000322272 RGPD8O14715 1765 aaPredicted RBP33.22■■■□□ 2.91
TNFSF12-202ENST00000322272 USP32Q8NFA0 1604 aa33.21■■■□□ 2.91
TNFSF12-202ENST00000322272 PRR36Q9H6K5 1346 aa33.21■■■□□ 2.91
TNFSF12-202ENST00000322272 TULP4Q9NRJ4 1543 aa33.21■■■□□ 2.91
TNFSF12-202ENST00000322272 KIF1AQ12756 1690 aa33.21■■■□□ 2.91
TNFSF12-202ENST00000322272 PNPLA6Q8IY17 1366 aa33.21■■■□□ 2.91
TNFSF12-202ENST00000322272 PXDNQ92626 1479 aa33.2■■■□□ 2.91
TNFSF12-202ENST00000322272 GPRASP1Q5JY77 1395 aa33.19■■■□□ 2.9
TNFSF12-202ENST00000322272 PMFBP1Q8TBY8 1022 aa33.19■■■□□ 2.9
TNFSF12-202ENST00000322272 CDK19Q9BWU1 502 aa33.19■■■□□ 2.9
TNFSF12-202ENST00000322272 NUTM2BA6NNL0 878 aaPredicted RBP33.18■■■□□ 2.9
TNFSF12-202ENST00000322272 NUTM2EB1AL46 878 aaPredicted RBP33.18■■■□□ 2.9
TNFSF12-202ENST00000322272 HSPA5P11021 654 aaKnown RBP33.18■■■□□ 2.9
TNFSF12-202ENST00000322272 NUTM2AQ8IVF1 878 aaPredicted RBP33.18■■■□□ 2.9
TNFSF12-202ENST00000322272 LRP6O75581 1613 aa33.18■■■□□ 2.9
TNFSF12-202ENST00000322272 USP47Q96K76 1375 aa33.15■■■□□ 2.9
TNFSF12-202ENST00000322272 DIEXFQ68CQ4 756 aaKnown RBP33.15■■■□□ 2.9
TNFSF12-202ENST00000322272 KRT28Q7Z3Y7 464 aa33.15■■■□□ 2.9
TNFSF12-202ENST00000322272 MEX3CQ5U5Q3 659 aaKnown RBP33.14■■■□□ 2.9
TNFSF12-202ENST00000322272 ILDR2Q71H61 639 aa33.14■■■□□ 2.9
TNFSF12-202ENST00000322272 NUDT16Q96DE0 195 aaKnown RBP33.13■■■□□ 2.89
TNFSF12-202ENST00000322272 QRICH2Q9H0J4 1663 aa33.11■■■□□ 2.89
TNFSF12-202ENST00000322272 ATP7BP35670 1465 aa33.11■■■□□ 2.89
TNFSF12-202ENST00000322272 PSME1Q06323 249 aa33.11■■■□□ 2.89
TNFSF12-202ENST00000322272 RGS17Q9UGC6 210 aaPredicted RBP33.1■■■□□ 2.89
TNFSF12-202ENST00000322272 SRPK2P78362 688 aaKnown RBP33.09■■■□□ 2.89
TNFSF12-202ENST00000322272 SPATA31A3Q5VYP0 1347 aa33.07■■■□□ 2.88
TNFSF12-202ENST00000322272 NGDNQ8NEJ9 315 aaKnown RBP33.06■■■□□ 2.88
TNFSF12-202ENST00000322272 CABP2Q9NPB3 220 aa33.06■■■□□ 2.88
TNFSF12-202ENST00000322272 CCDC61Q9Y6R9 512 aa33.05■■■□□ 2.88
TNFSF12-202ENST00000322272 EVC2Q86UK5 1308 aa33.02■■■□□ 2.88
TNFSF12-202ENST00000322272 COL22A1Q8NFW1 1626 aaPredicted RBP33.01■■■□□ 2.87
TNFSF12-202ENST00000322272 TNS3Q68CZ2 1445 aa33.01■■■□□ 2.87
TNFSF12-202ENST00000322272 SBNO1A3KN83 1393 aa33.01■■■□□ 2.87
TNFSF12-202ENST00000322272 ADAMTS2O95450 1211 aa33.01■■■□□ 2.87
TNFSF12-202ENST00000322272 ITSN1Q15811 1721 aa33■■■□□ 2.87
TNFSF12-202ENST00000322272 LMOD2Q6P5Q4 547 aa32.99■■■□□ 2.87
TNFSF12-202ENST00000322272 C8orf37Q96NL8 207 aa32.97■■■□□ 2.87
TNFSF12-202ENST00000322272 TOPAZ1Q8N9V7 1692 aa32.96■■■□□ 2.87
TNFSF12-202ENST00000322272 PLEKHG3A1L390 1219 aa32.96■■■□□ 2.87
TNFSF12-202ENST00000322272 POTEAQ6S8J7 498 aa32.95■■■□□ 2.87
TNFSF12-202ENST00000322272 ACEP12821 1306 aa32.95■■■□□ 2.87
TNFSF12-202ENST00000322272 PPIP5K1Q6PFW1 1433 aa32.95■■■□□ 2.86
TNFSF12-202ENST00000322272 POLR3AO14802 1390 aaPredicted RBP32.93■■■□□ 2.86
TNFSF12-202ENST00000322272 ARHGEF10O15013 1369 aa32.93■■■□□ 2.86
TNFSF12-202ENST00000322272 SBNO2Q9Y2G9 1366 aa32.93■■■□□ 2.86
TNFSF12-202ENST00000322272 ST20-MTHFSA0A0A6YYL1 179 aa32.92■■■□□ 2.86
TNFSF12-202ENST00000322272 PAK3O75914 559 aaPredicted RBP32.92■■■□□ 2.86
TNFSF12-202ENST00000322272 PLEKHG5O94827 1062 aa32.92■■■□□ 2.86
TNFSF12-202ENST00000322272 AFF2P51816 1311 aa32.92■■■□□ 2.86
TNFSF12-202ENST00000322272 ZNF772Q68DY9 489 aaPredicted RBP32.91■■■□□ 2.86
TNFSF12-202ENST00000322272 TRPM3Q9HCF6 1732 aaPredicted RBP32.91■■■□□ 2.86
TNFSF12-202ENST00000322272 NGLY1Q96IV0 654 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms