RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 DDX19BQ9UMR2 479 aa20.34■□□□□ 0.85
SFXN1-201ENST00000321442 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
SFXN1-201ENST00000321442 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
SFXN1-201ENST00000321442 SYCP2Q9BX26 1530 aa20.33■□□□□ 0.84
SFXN1-201ENST00000321442 XPCQ01831 940 aaPredicted RBP20.32■□□□□ 0.84
SFXN1-201ENST00000321442 CDK19Q9BWU1 502 aa20.32■□□□□ 0.84
SFXN1-201ENST00000321442 FBLN1P23142 703 aa20.32■□□□□ 0.84
SFXN1-201ENST00000321442 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
SFXN1-201ENST00000321442 SLC52A1Q9NWF4 448 aa20.32■□□□□ 0.84
SFXN1-201ENST00000321442 FAM13BQ9NYF5 915 aa20.32■□□□□ 0.84
SFXN1-201ENST00000321442 NUP160Q12769 1436 aa20.32■□□□□ 0.84
SFXN1-201ENST00000321442 MAGI3Q5TCQ9 1506 aa20.31■□□□□ 0.84
SFXN1-201ENST00000321442 RIPK4P57078 832 aa20.31■□□□□ 0.84
SFXN1-201ENST00000321442 TARBP1Q13395 1621 aaKnown RBP20.31■□□□□ 0.84
SFXN1-201ENST00000321442 ST18O60284 1047 aa20.31■□□□□ 0.84
SFXN1-201ENST00000321442 FAM43AQ8N2R8 423 aa20.31■□□□□ 0.84
SFXN1-201ENST00000321442 DIAPH1O60610 1272 aaKnown RBP20.3■□□□□ 0.84
SFXN1-201ENST00000321442 PSME1Q06323 249 aa20.3■□□□□ 0.84
SFXN1-201ENST00000321442 SKOR2Q2VWA4 1001 aaPredicted RBP20.29■□□□□ 0.84
SFXN1-201ENST00000321442 KIAA1211Q6ZU35 1233 aa20.29■□□□□ 0.84
SFXN1-201ENST00000321442 NLRP6P59044 892 aa20.29■□□□□ 0.84
SFXN1-201ENST00000321442 MRE11P49959 708 aa20.28■□□□□ 0.84
SFXN1-201ENST00000321442 PDE3AQ14432 1141 aa20.27■□□□□ 0.84
SFXN1-201ENST00000321442 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
SFXN1-201ENST00000321442 TSR2Q969E8 191 aaKnown RBP20.27■□□□□ 0.84
SFXN1-201ENST00000321442 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
SFXN1-201ENST00000321442 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
SFXN1-201ENST00000321442 PLCH2O75038 1416 aa20.27■□□□□ 0.83
SFXN1-201ENST00000321442 SYAP1Q96A49 352 aaPredicted RBP20.26■□□□□ 0.83
SFXN1-201ENST00000321442 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
SFXN1-201ENST00000321442 RPRD2Q5VT52 1461 aaKnown RBP20.26■□□□□ 0.83
SFXN1-201ENST00000321442 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.26■□□□□ 0.83
SFXN1-201ENST00000321442 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
SFXN1-201ENST00000321442 ZNF428Q96B54 188 aa20.25■□□□□ 0.83
SFXN1-201ENST00000321442 MCTP1Q6DN14 999 aa20.24■□□□□ 0.83
SFXN1-201ENST00000321442 RILPL2Q969X0 211 aa20.24■□□□□ 0.83
SFXN1-201ENST00000321442 ESCO1Q5FWF5 840 aa20.23■□□□□ 0.83
SFXN1-201ENST00000321442 EXOSC9Q06265 439 aaKnown RBP20.23■□□□□ 0.83
SFXN1-201ENST00000321442 HMMRO75330 724 aa20.23■□□□□ 0.83
SFXN1-201ENST00000321442 SLFN5Q08AF3 891 aa20.22■□□□□ 0.83
SFXN1-201ENST00000321442 STAC3Q96MF2 364 aa20.22■□□□□ 0.83
SFXN1-201ENST00000321442 DHX29Q7Z478 1369 aaKnown RBP20.21■□□□□ 0.83
SFXN1-201ENST00000321442 STK31Q9BXU1 1019 aa20.21■□□□□ 0.83
SFXN1-201ENST00000321442 MCM4P33991 863 aa20.2■□□□□ 0.82
SFXN1-201ENST00000321442 RNF214Q8ND24 703 aa20.2■□□□□ 0.82
SFXN1-201ENST00000321442 ABTB2Q8N961 1025 aa20.2■□□□□ 0.82
SFXN1-201ENST00000321442 C1orf115Q9H7X2 142 aa20.2■□□□□ 0.82
SFXN1-201ENST00000321442 CFAP65Q6ZU64 1925 aaKnown RBP20.2■□□□□ 0.82
SFXN1-201ENST00000321442 NASPP49321 788 aaPredicted RBP20.19■□□□□ 0.82
SFXN1-201ENST00000321442 NOS1P29475 1434 aa20.19■□□□□ 0.82
SFXN1-201ENST00000321442 EIF2S2P20042 333 aaKnown RBP20.19■□□□□ 0.82
SFXN1-201ENST00000321442 DENND4BO75064 1496 aaPredicted RBP20.19■□□□□ 0.82
SFXN1-201ENST00000321442 DISP3Q9P2K9 1392 aa20.18■□□□□ 0.82
SFXN1-201ENST00000321442 PRKAR2BP31323 418 aa20.18■□□□□ 0.82
SFXN1-201ENST00000321442 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
SFXN1-201ENST00000321442 R3HCC1Q9Y3T6 440 aaKnown RBP20.17■□□□□ 0.82
SFXN1-201ENST00000321442 THEMISQ8N1K5 641 aaPredicted RBP20.17■□□□□ 0.82
SFXN1-201ENST00000321442 CAVIN1Q6NZI2 390 aaKnown RBP20.16■□□□□ 0.82
SFXN1-201ENST00000321442 CDK11BP21127 795 aaKnown RBP20.16■□□□□ 0.82
SFXN1-201ENST00000321442 DUSP27Q5VZP5 1158 aa20.16■□□□□ 0.82
SFXN1-201ENST00000321442 WDR7Q9Y4E6 1490 aa20.15■□□□□ 0.82
SFXN1-201ENST00000321442 THUMPD2Q9BTF0 503 aaKnown RBP20.14■□□□□ 0.81
SFXN1-201ENST00000321442 WWC1Q8IX03 1113 aa20.14■□□□□ 0.81
SFXN1-201ENST00000321442 CHMP3Q9Y3E7 222 aa20.14■□□□□ 0.81
SFXN1-201ENST00000321442 KIF16BQ96L93 1317 aa20.14■□□□□ 0.81
SFXN1-201ENST00000321442 MPNDQ8N594 471 aa20.13■□□□□ 0.81
SFXN1-201ENST00000321442 GRPEL1Q9HAV7 217 aa20.13■□□□□ 0.81
SFXN1-201ENST00000321442 CFAP43Q8NDM7 1665 aa20.12■□□□□ 0.81
SFXN1-201ENST00000321442 RBM10P98175 930 aaKnown RBP20.12■□□□□ 0.81
SFXN1-201ENST00000321442 ANO2Q9NQ90 1003 aa20.12■□□□□ 0.81
SFXN1-201ENST00000321442 KDM5BQ9UGL1 1544 aa20.12■□□□□ 0.81
SFXN1-201ENST00000321442 LMOD3Q0VAK6 560 aa20.12■□□□□ 0.81
SFXN1-201ENST00000321442 NOB1Q9ULX3 412 aaKnown RBP20.12■□□□□ 0.81
SFXN1-201ENST00000321442 NPHP1O15259 732 aa20.12■□□□□ 0.81
SFXN1-201ENST00000321442 IGHDP01880 384 aa20.12■□□□□ 0.81
SFXN1-201ENST00000321442 REC8O95072 547 aa20.11■□□□□ 0.81
SFXN1-201ENST00000321442 AAMPQ13685 434 aa20.11■□□□□ 0.81
SFXN1-201ENST00000321442 NUDT16Q96DE0 195 aaKnown RBP20.11■□□□□ 0.81
SFXN1-201ENST00000321442 ESPNB1AK53 854 aa20.11■□□□□ 0.81
SFXN1-201ENST00000321442 NRDCO43847 1150 aa20.11■□□□□ 0.81
SFXN1-201ENST00000321442 NME9Q86XW9 330 aa20.11■□□□□ 0.81
SFXN1-201ENST00000321442 GOLGA6L6A8MZA4 724 aa20.1■□□□□ 0.81
SFXN1-201ENST00000321442 SULT6B1Q6IMI4 303 aa20.1■□□□□ 0.81
SFXN1-201ENST00000321442 ATF3P18847 181 aa20.1■□□□□ 0.81
SFXN1-201ENST00000321442 NUCB2P80303 420 aa20.1■□□□□ 0.81
SFXN1-201ENST00000321442 TBC1D2Q9BYX2 928 aa20.1■□□□□ 0.81
SFXN1-201ENST00000321442 SAMD9Q5K651 1589 aa20.1■□□□□ 0.81
SFXN1-201ENST00000321442 NSD3Q9BZ95 1437 aa20.1■□□□□ 0.81
SFXN1-201ENST00000321442 NLRP2Q9NX02 1062 aa20.09■□□□□ 0.81
SFXN1-201ENST00000321442 MVPQ14764 893 aaKnown RBP20.09■□□□□ 0.81
SFXN1-201ENST00000321442 NCKAP5LQ9HCH0 1330 aa20.09■□□□□ 0.81
SFXN1-201ENST00000321442 RTEL1-TNFRSF6BF6WH68 1400 aa20.08■□□□□ 0.81
SFXN1-201ENST00000321442 PRPF40AO75400 957 aaKnown RBP20.08■□□□□ 0.81
SFXN1-201ENST00000321442 PHF14O94880 888 aa20.08■□□□□ 0.81
SFXN1-201ENST00000321442 TEFQ10587 303 aa20.08■□□□□ 0.8
SFXN1-201ENST00000321442 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.07■□□□□ 0.8
SFXN1-201ENST00000321442 API5Q9BZZ5 524 aaKnown RBP20.07■□□□□ 0.8
SFXN1-201ENST00000321442 ERCC6L2Q5T890 1561 aa20.07■□□□□ 0.8
SFXN1-201ENST00000321442 TCOF1Q13428 1488 aaKnown RBP20.07■□□□□ 0.8
SFXN1-201ENST00000321442 ABCC2Q92887 1545 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms