RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 CHMP5Q9NZZ3 219 aa17.06■□□□□ 0.32
RAPH1-202ENST00000319170 CCDC39Q9UFE4 941 aa17.06■□□□□ 0.32
RAPH1-202ENST00000319170 FKBP5Q13451 457 aaPredicted RBP17.05■□□□□ 0.32
RAPH1-202ENST00000319170 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
RAPH1-202ENST00000319170 RBM33Q96EV2 1170 aaKnown RBP17.05■□□□□ 0.32
RAPH1-202ENST00000319170 SKIDA1Q1XH10 827 aa17.05■□□□□ 0.32
RAPH1-202ENST00000319170 NUCB2P80303 420 aa17.04■□□□□ 0.32
RAPH1-202ENST00000319170 CCDC173Q0VFZ6 552 aa17.04■□□□□ 0.32
RAPH1-202ENST00000319170 MYO6Q9UM54 1294 aa17.04■□□□□ 0.32
RAPH1-202ENST00000319170 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.04■□□□□ 0.32
RAPH1-202ENST00000319170 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
RAPH1-202ENST00000319170 NASPP49321 788 aaPredicted RBP17.04■□□□□ 0.32
RAPH1-202ENST00000319170 PSME1Q06323 249 aa17.03■□□□□ 0.32
RAPH1-202ENST00000319170 DCTN1Q14203 1278 aa17.03■□□□□ 0.32
RAPH1-202ENST00000319170 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
RAPH1-202ENST00000319170 CWC15Q9P013 229 aaKnown RBP17.03■□□□□ 0.32
RAPH1-202ENST00000319170 MTMR7Q9Y216 660 aa17.02■□□□□ 0.32
RAPH1-202ENST00000319170 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.32
RAPH1-202ENST00000319170 APAF1O14727 1248 aa17.02■□□□□ 0.32
RAPH1-202ENST00000319170 OFD1O75665 1012 aa17.02■□□□□ 0.31
RAPH1-202ENST00000319170 RDXP35241 583 aaKnown RBP17.02■□□□□ 0.31
RAPH1-202ENST00000319170 C22orf23Q9BZE7 217 aa17.01■□□□□ 0.31
RAPH1-202ENST00000319170 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
RAPH1-202ENST00000319170 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
RAPH1-202ENST00000319170 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
RAPH1-202ENST00000319170 CCDC191Q8NCU4 936 aa17.01■□□□□ 0.31
RAPH1-202ENST00000319170 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.01■□□□□ 0.31
RAPH1-202ENST00000319170 TDRD9Q8NDG6 1382 aaKnown RBP17.01■□□□□ 0.31
RAPH1-202ENST00000319170 SMC2O95347 1197 aa17.01■□□□□ 0.31
RAPH1-202ENST00000319170 H0YHG0 523 aa17.01■□□□□ 0.31
RAPH1-202ENST00000319170 RSPH4AQ5TD94 716 aa17.01■□□□□ 0.31
RAPH1-202ENST00000319170 KLHL34Q8N239 644 aa17.01■□□□□ 0.31
RAPH1-202ENST00000319170 NEUROD6Q96NK8 337 aa17.01■□□□□ 0.31
RAPH1-202ENST00000319170 API5Q9BZZ5 524 aaKnown RBP17.01■□□□□ 0.31
RAPH1-202ENST00000319170 XBP1P17861 261 aa17■□□□□ 0.31
RAPH1-202ENST00000319170 TMEM132AQ24JP5 1023 aa17■□□□□ 0.31
RAPH1-202ENST00000319170 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
RAPH1-202ENST00000319170 LNPKQ9C0E8 428 aa16.99■□□□□ 0.31
RAPH1-202ENST00000319170 CNTROBQ8N137 903 aa16.98■□□□□ 0.31
RAPH1-202ENST00000319170 IKQ13123 557 aaPredicted RBP16.98■□□□□ 0.31
RAPH1-202ENST00000319170 RUNDC1Q96C34 613 aa16.98■□□□□ 0.31
RAPH1-202ENST00000319170 AIMP1Q12904 312 aaKnown RBP16.98■□□□□ 0.31
RAPH1-202ENST00000319170 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
RAPH1-202ENST00000319170 PSMA5P28066 241 aa16.98■□□□□ 0.31
RAPH1-202ENST00000319170 CUX1P39880 1505 aa16.97■□□□□ 0.31
RAPH1-202ENST00000319170 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
RAPH1-202ENST00000319170 MAGEC2Q9UBF1 373 aaPredicted RBP16.97■□□□□ 0.31
RAPH1-202ENST00000319170 HMOX1P09601 288 aa16.97■□□□□ 0.31
RAPH1-202ENST00000319170 ERCC4Q92889 916 aaPredicted RBP16.97■□□□□ 0.31
RAPH1-202ENST00000319170 HSP90AB4PQ58FF6 505 aa16.97■□□□□ 0.31
RAPH1-202ENST00000319170 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
RAPH1-202ENST00000319170 LETM1O95202 739 aaPredicted RBP16.96■□□□□ 0.31
RAPH1-202ENST00000319170 SDF4Q9BRK5 362 aa16.95■□□□□ 0.3
RAPH1-202ENST00000319170 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
RAPH1-202ENST00000319170 TRIM5Q9C035 493 aa16.95■□□□□ 0.3
RAPH1-202ENST00000319170 SMARCE1Q969G3 411 aa16.95■□□□□ 0.3
RAPH1-202ENST00000319170 MIA2Q96PC5 1412 aa16.95■□□□□ 0.3
RAPH1-202ENST00000319170 CDC45O75419 566 aa16.95■□□□□ 0.3
RAPH1-202ENST00000319170 TSPY26PQ9H489 355 aa16.94■□□□□ 0.3
RAPH1-202ENST00000319170 BRPF1P55201 1214 aaPredicted RBP16.94■□□□□ 0.3
RAPH1-202ENST00000319170 PANK1Q8TE04 598 aa16.94■□□□□ 0.3
RAPH1-202ENST00000319170 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
RAPH1-202ENST00000319170 RNF214Q8ND24 703 aa16.93■□□□□ 0.3
RAPH1-202ENST00000319170 CCP110O43303 1012 aa16.93■□□□□ 0.3
RAPH1-202ENST00000319170 CAVIN1Q6NZI2 390 aaKnown RBP16.93■□□□□ 0.3
RAPH1-202ENST00000319170 PLCD4Q9BRC7 762 aa16.93■□□□□ 0.3
RAPH1-202ENST00000319170 KINO60870 393 aaKnown RBP16.92■□□□□ 0.3
RAPH1-202ENST00000319170 SART3Q15020 963 aaKnown RBP16.92■□□□□ 0.3
RAPH1-202ENST00000319170 WWC2Q6AWC2 1192 aa16.92■□□□□ 0.3
RAPH1-202ENST00000319170 SYCP1Q15431 976 aa16.92■□□□□ 0.3
RAPH1-202ENST00000319170 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
RAPH1-202ENST00000319170 KIF7Q2M1P5 1343 aa16.91■□□□□ 0.3
RAPH1-202ENST00000319170 AXDND1Q5T1B0 1012 aaPredicted RBP16.91■□□□□ 0.3
RAPH1-202ENST00000319170 GNAI1P63096 354 aa16.91■□□□□ 0.3
RAPH1-202ENST00000319170 LEKR1Q6ZMV7 388 aa16.91■□□□□ 0.3
RAPH1-202ENST00000319170 SPC24Q8NBT2 197 aa16.9■□□□□ 0.3
RAPH1-202ENST00000319170 FILIP1LQ4L180 1135 aa16.9■□□□□ 0.3
RAPH1-202ENST00000319170 TXLNAP40222 546 aa16.9■□□□□ 0.3
RAPH1-202ENST00000319170 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
RAPH1-202ENST00000319170 DHX57Q6P158 1386 aaKnown RBP16.9■□□□□ 0.3
RAPH1-202ENST00000319170 ZRSR2Q15696 482 aaKnown RBP16.9■□□□□ 0.3
RAPH1-202ENST00000319170 SLC3A2P08195 630 aaKnown RBP16.89■□□□□ 0.29
RAPH1-202ENST00000319170 NFKBIBQ15653 356 aa16.89■□□□□ 0.29
RAPH1-202ENST00000319170 CEBPZQ03701 1054 aaKnown RBP16.89■□□□□ 0.29
RAPH1-202ENST00000319170 MTERF4Q7Z6M4 381 aaKnown RBP16.89■□□□□ 0.29
RAPH1-202ENST00000319170 KIF6Q6ZMV9 814 aa16.89■□□□□ 0.29
RAPH1-202ENST00000319170 TSPYL1Q9H0U9 437 aa16.89■□□□□ 0.29
RAPH1-202ENST00000319170 ERLIN2O94905 339 aa16.89■□□□□ 0.29
RAPH1-202ENST00000319170 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.29
RAPH1-202ENST00000319170 GOLGA6L10A6NI86 522 aa16.89■□□□□ 0.29
RAPH1-202ENST00000319170 PAF1Q8N7H5 531 aa16.88■□□□□ 0.29
RAPH1-202ENST00000319170 MRE11P49959 708 aa16.88■□□□□ 0.29
RAPH1-202ENST00000319170 TBC1D2BQ9UPU7 963 aa16.88■□□□□ 0.29
RAPH1-202ENST00000319170 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
RAPH1-202ENST00000319170 CCAR1Q8IX12 1150 aaKnown RBP16.88■□□□□ 0.29
RAPH1-202ENST00000319170 NEFHP12036 1026 aa16.88■□□□□ 0.29
RAPH1-202ENST00000319170 SEPT7Q16181 437 aaKnown RBP16.87■□□□□ 0.29
RAPH1-202ENST00000319170 FMNL2Q96PY5 1086 aa16.87■□□□□ 0.29
RAPH1-202ENST00000319170 ZNF396Q96N95 335 aaPredicted RBP16.87■□□□□ 0.29
RAPH1-202ENST00000319170 ENOX2Q16206 610 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms