RNA–Protein interactions for RNA: ENST00000316891.9

TRIT1-201, Transcript of tRNA isopentenyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIT1, Length 2,112 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-201ENST00000316891 PTCH1Q13635 1447 aa17.59■□□□□ 0.41
TRIT1-201ENST00000316891 EVC2Q86UK5 1308 aa17.58■□□□□ 0.4
TRIT1-201ENST00000316891 CHD2O14647 1828 aaKnown RBP17.58■□□□□ 0.4
TRIT1-201ENST00000316891 MINK1Q8N4C8 1332 aaPredicted RBP17.56■□□□□ 0.4
TRIT1-201ENST00000316891 ANP32CO43423 234 aa17.56■□□□□ 0.4
TRIT1-201ENST00000316891 NCKAP5LQ9HCH0 1330 aa17.56■□□□□ 0.4
TRIT1-201ENST00000316891 AMOTL2Q9Y2J4 779 aa17.56■□□□□ 0.4
TRIT1-201ENST00000316891 PER1O15534 1290 aaPredicted RBP17.55■□□□□ 0.4
TRIT1-201ENST00000316891 ADGRB2O60241 1585 aa17.55■□□□□ 0.4
TRIT1-201ENST00000316891 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.55■□□□□ 0.4
TRIT1-201ENST00000316891 PANK3Q9H999 370 aa17.54■□□□□ 0.4
TRIT1-201ENST00000316891 HSPA2P54652 639 aa17.51■□□□□ 0.39
TRIT1-201ENST00000316891 PRKRIP1Q9H875 184 aaPredicted RBP17.51■□□□□ 0.39
TRIT1-201ENST00000316891 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
TRIT1-201ENST00000316891 NWD1Q149M9 1564 aa17.51■□□□□ 0.39
TRIT1-201ENST00000316891 KCNA6P17658 529 aa17.5■□□□□ 0.39
TRIT1-201ENST00000316891 ATAD2Q6PL18 1390 aa17.5■□□□□ 0.39
TRIT1-201ENST00000316891 CDK19Q9BWU1 502 aa17.5■□□□□ 0.39
TRIT1-201ENST00000316891 STRCQ7RTU9 1775 aa17.49■□□□□ 0.39
TRIT1-201ENST00000316891 NINLQ9Y2I6 1382 aa17.49■□□□□ 0.39
TRIT1-201ENST00000316891 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
TRIT1-201ENST00000316891 CCER2I3L3R5 266 aa17.48■□□□□ 0.39
TRIT1-201ENST00000316891 WASLO00401 505 aaPredicted RBP17.48■□□□□ 0.39
TRIT1-201ENST00000316891 SLC12A5Q9H2X9 1139 aa17.48■□□□□ 0.39
TRIT1-201ENST00000316891 CARD14Q9BXL6 1004 aa17.45■□□□□ 0.38
TRIT1-201ENST00000316891 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
TRIT1-201ENST00000316891 ANKRD36BQ8N2N9 1353 aa17.45■□□□□ 0.38
TRIT1-201ENST00000316891 CD163L1Q9NR16 1453 aa17.45■□□□□ 0.38
TRIT1-201ENST00000316891 ATP7BP35670 1465 aa17.44■□□□□ 0.38
TRIT1-201ENST00000316891 TMC1Q8TDI8 760 aa17.44■□□□□ 0.38
TRIT1-201ENST00000316891 PARD3Q8TEW0 1356 aa17.44■□□□□ 0.38
TRIT1-201ENST00000316891 NPC1L1Q9UHC9 1359 aa17.44■□□□□ 0.38
TRIT1-201ENST00000316891 AMER1Q5JTC6 1135 aaPredicted RBP17.44■□□□□ 0.38
TRIT1-201ENST00000316891 NALCNQ8IZF0 1738 aa17.43■□□□□ 0.38
TRIT1-201ENST00000316891 USP32Q8NFA0 1604 aa17.43■□□□□ 0.38
TRIT1-201ENST00000316891 KNSTRNQ9Y448 316 aa17.42■□□□□ 0.38
TRIT1-201ENST00000316891 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
TRIT1-201ENST00000316891 NKTRP30414 1462 aaKnown RBP17.42■□□□□ 0.38
TRIT1-201ENST00000316891 STRCP1A6NGW2 1772 aa17.41■□□□□ 0.38
TRIT1-201ENST00000316891 A0A1W2PP64 1363 aa17.41■□□□□ 0.38
TRIT1-201ENST00000316891 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
TRIT1-201ENST00000316891 RALBP1Q15311 655 aa17.41■□□□□ 0.38
TRIT1-201ENST00000316891 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
TRIT1-201ENST00000316891 CDC42BPGQ6DT37 1551 aa17.4■□□□□ 0.38
TRIT1-201ENST00000316891 NUDT16Q96DE0 195 aaKnown RBP17.39■□□□□ 0.38
TRIT1-201ENST00000316891 FMN2Q9NZ56 1722 aa17.39■□□□□ 0.37
TRIT1-201ENST00000316891 CABP1Q9NZU7 370 aa17.39■□□□□ 0.37
TRIT1-201ENST00000316891 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
TRIT1-201ENST00000316891 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
TRIT1-201ENST00000316891 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
TRIT1-201ENST00000316891 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
TRIT1-201ENST00000316891 CPSF1Q10570 1443 aaKnown RBP17.37■□□□□ 0.37
TRIT1-201ENST00000316891 CNGB1Q14028 1251 aaPredicted RBP17.37■□□□□ 0.37
TRIT1-201ENST00000316891 TERF2IPQ9NYB0 399 aa17.36■□□□□ 0.37
TRIT1-201ENST00000316891 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
TRIT1-201ENST00000316891 ITSN1Q15811 1721 aa17.36■□□□□ 0.37
TRIT1-201ENST00000316891 AKAP12Q02952 1782 aa17.36■□□□□ 0.37
TRIT1-201ENST00000316891 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
TRIT1-201ENST00000316891 ANKARQ7Z5J8 1434 aa17.35■□□□□ 0.37
TRIT1-201ENST00000316891 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
TRIT1-201ENST00000316891 RGPD8O14715 1765 aaPredicted RBP17.35■□□□□ 0.37
TRIT1-201ENST00000316891 HDGFL2Q7Z4V5 671 aaPredicted RBP17.33■□□□□ 0.36
TRIT1-201ENST00000316891 RBM33Q96EV2 1170 aaKnown RBP17.33■□□□□ 0.36
TRIT1-201ENST00000316891 PLEKHG3A1L390 1219 aa17.32■□□□□ 0.36
TRIT1-201ENST00000316891 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
TRIT1-201ENST00000316891 NSD2O96028 1365 aa17.31■□□□□ 0.36
TRIT1-201ENST00000316891 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
TRIT1-201ENST00000316891 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
TRIT1-201ENST00000316891 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
TRIT1-201ENST00000316891 NCOA3Q9Y6Q9 1424 aa17.3■□□□□ 0.36
TRIT1-201ENST00000316891 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
TRIT1-201ENST00000316891 NLRP13Q86W25 1043 aa17.3■□□□□ 0.36
TRIT1-201ENST00000316891 MRS2Q9HD23 443 aa17.3■□□□□ 0.36
TRIT1-201ENST00000316891 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
TRIT1-201ENST00000316891 NRKQ7Z2Y5 1582 aa17.3■□□□□ 0.36
TRIT1-201ENST00000316891 KIF20BQ96Q89 1820 aa17.3■□□□□ 0.36
TRIT1-201ENST00000316891 TMEM94Q12767 1356 aa17.29■□□□□ 0.36
TRIT1-201ENST00000316891 XIRP1Q702N8 1843 aaKnown RBP17.28■□□□□ 0.36
TRIT1-201ENST00000316891 POLR3AO14802 1390 aaPredicted RBP17.28■□□□□ 0.36
TRIT1-201ENST00000316891 ACEP12821 1306 aa17.27■□□□□ 0.36
TRIT1-201ENST00000316891 PPP2R1AP30153 589 aa17.27■□□□□ 0.35
TRIT1-201ENST00000316891 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
TRIT1-201ENST00000316891 FYB1O15117 783 aa17.26■□□□□ 0.35
TRIT1-201ENST00000316891 USP6P35125 1406 aa17.25■□□□□ 0.35
TRIT1-201ENST00000316891 DCCP43146 1447 aa17.25■□□□□ 0.35
TRIT1-201ENST00000316891 ZNF335Q9H4Z2 1342 aaPredicted RBP17.25■□□□□ 0.35
TRIT1-201ENST00000316891 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
TRIT1-201ENST00000316891 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
TRIT1-201ENST00000316891 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
TRIT1-201ENST00000316891 SSH2Q76I76 1423 aa17.25■□□□□ 0.35
TRIT1-201ENST00000316891 LRRC7Q96NW7 1537 aa17.25■□□□□ 0.35
TRIT1-201ENST00000316891 C14orf37Q86TY3 774 aa17.24■□□□□ 0.35
TRIT1-201ENST00000316891 MORC1Q86VD1 984 aa17.23■□□□□ 0.35
TRIT1-201ENST00000316891 PMFBP1Q8TBY8 1022 aa17.22■□□□□ 0.35
TRIT1-201ENST00000316891 PNISRQ8TF01 805 aaKnown RBP17.22■□□□□ 0.35
TRIT1-201ENST00000316891 GGNBP2Q9H3C7 697 aa17.22■□□□□ 0.35
TRIT1-201ENST00000316891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRIT1-201ENST00000316891 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
TRIT1-201ENST00000316891 MST1RQ04912 1400 aa17.2■□□□□ 0.34
TRIT1-201ENST00000316891 TTC21BQ7Z4L5 1316 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms