RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 POLR3AO14802 1390 aaPredicted RBP25.68■■□□□ 1.7
AP3S1-201ENST00000316788 USP32Q8NFA0 1604 aa25.68■■□□□ 1.7
AP3S1-201ENST00000316788 PUS7Q96PZ0 661 aaKnown RBP25.68■■□□□ 1.7
AP3S1-201ENST00000316788 SLFN5Q08AF3 891 aa25.66■■□□□ 1.7
AP3S1-201ENST00000316788 IPO9Q96P70 1041 aaKnown RBP25.66■■□□□ 1.7
AP3S1-201ENST00000316788 PIK3C2BO00750 1634 aa25.66■■□□□ 1.7
AP3S1-201ENST00000316788 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.66■■□□□ 1.7
AP3S1-201ENST00000316788 CRBNQ96SW2 442 aa25.66■■□□□ 1.7
AP3S1-201ENST00000316788 CARD14Q9BXL6 1004 aa25.66■■□□□ 1.7
AP3S1-201ENST00000316788 QRICH2Q9H0J4 1663 aa25.63■■□□□ 1.69
AP3S1-201ENST00000316788 PREX1Q8TCU6 1659 aa25.62■■□□□ 1.69
AP3S1-201ENST00000316788 PLIN1O60240 522 aa25.61■■□□□ 1.69
AP3S1-201ENST00000316788 NKTRP30414 1462 aaKnown RBP25.59■■□□□ 1.69
AP3S1-201ENST00000316788 SPATA31D1Q6ZQQ2 1576 aa25.59■■□□□ 1.69
AP3S1-201ENST00000316788 BACH2Q9BYV9 841 aa25.58■■□□□ 1.69
AP3S1-201ENST00000316788 KDM2BQ8NHM5 1336 aa25.58■■□□□ 1.68
AP3S1-201ENST00000316788 E9PSI1 815 aa25.57■■□□□ 1.68
AP3S1-201ENST00000316788 PDE4AP27815 886 aa25.57■■□□□ 1.68
AP3S1-201ENST00000316788 ZFYVE9O95405 1425 aa25.57■■□□□ 1.68
AP3S1-201ENST00000316788 NSD3Q9BZ95 1437 aa25.56■■□□□ 1.68
AP3S1-201ENST00000316788 NEXMIFQ5QGS0 1516 aa25.56■■□□□ 1.68
AP3S1-201ENST00000316788 TNRQ92752 1358 aa25.55■■□□□ 1.68
AP3S1-201ENST00000316788 CENPQQ7L2Z9 268 aaPredicted RBP25.54■■□□□ 1.68
AP3S1-201ENST00000316788 NSD2O96028 1365 aa25.54■■□□□ 1.68
AP3S1-201ENST00000316788 NINLQ9Y2I6 1382 aa25.53■■□□□ 1.68
AP3S1-201ENST00000316788 APAF1O14727 1248 aa25.53■■□□□ 1.68
AP3S1-201ENST00000316788 CHGAP10645 457 aaKnown RBP25.53■■□□□ 1.68
AP3S1-201ENST00000316788 IDI1Q13907 227 aa25.52■■□□□ 1.68
AP3S1-201ENST00000316788 NCBP3Q53F19 620 aaKnown RBP25.52■■□□□ 1.68
AP3S1-201ENST00000316788 SHPRHQ149N8 1683 aa25.51■■□□□ 1.68
AP3S1-201ENST00000316788 VGFO15240 615 aaPredicted RBP25.51■■□□□ 1.68
AP3S1-201ENST00000316788 C20orf194Q5TEA3 1177 aa25.51■■□□□ 1.67
AP3S1-201ENST00000316788 ZBTB47Q9UFB7 747 aaPredicted RBP25.51■■□□□ 1.67
AP3S1-201ENST00000316788 TRAK1Q9UPV9 953 aa25.51■■□□□ 1.67
AP3S1-201ENST00000316788 ARHGEF28Q8N1W1 1705 aaKnown RBP25.5■■□□□ 1.67
AP3S1-201ENST00000316788 CCDC146Q8IYE0 955 aa25.49■■□□□ 1.67
AP3S1-201ENST00000316788 PAK3O75914 559 aaPredicted RBP25.49■■□□□ 1.67
AP3S1-201ENST00000316788 MORC1Q86VD1 984 aa25.48■■□□□ 1.67
AP3S1-201ENST00000316788 IQSEC2Q5JU85 1478 aa25.47■■□□□ 1.67
AP3S1-201ENST00000316788 ANKRD36BQ8N2N9 1353 aa25.47■■□□□ 1.67
AP3S1-201ENST00000316788 TULP4Q9NRJ4 1543 aa25.47■■□□□ 1.67
AP3S1-201ENST00000316788 CGNL1Q0VF96 1302 aa25.46■■□□□ 1.67
AP3S1-201ENST00000316788 EVC2Q86UK5 1308 aa25.46■■□□□ 1.67
AP3S1-201ENST00000316788 SLC52A1Q9NWF4 448 aa25.46■■□□□ 1.67
AP3S1-201ENST00000316788 PHF23Q9BUL5 403 aaPredicted RBP25.43■■□□□ 1.66
AP3S1-201ENST00000316788 SLC12A5Q9H2X9 1139 aa25.43■■□□□ 1.66
AP3S1-201ENST00000316788 SPINK5Q9NQ38 1064 aaPredicted RBP25.43■■□□□ 1.66
AP3S1-201ENST00000316788 RUNDC1Q96C34 613 aa25.42■■□□□ 1.66
AP3S1-201ENST00000316788 PDE3AQ14432 1141 aa25.41■■□□□ 1.66
AP3S1-201ENST00000316788 WWC1Q8IX03 1113 aa25.41■■□□□ 1.66
AP3S1-201ENST00000316788 TMEM132EQ6IEE7 984 aa25.4■■□□□ 1.66
AP3S1-201ENST00000316788 NLRP1Q9C000 1473 aa25.4■■□□□ 1.66
AP3S1-201ENST00000316788 CCDC27Q2M243 656 aa25.4■■□□□ 1.66
AP3S1-201ENST00000316788 CFAP53Q96M91 514 aa25.39■■□□□ 1.65
AP3S1-201ENST00000316788 SETD1BQ9UPS6 1966 aaKnown RBP25.38■■□□□ 1.65
AP3S1-201ENST00000316788 WDR63Q8IWG1 891 aa25.37■■□□□ 1.65
AP3S1-201ENST00000316788 CEP170BQ9Y4F5 1589 aaPredicted RBP25.37■■□□□ 1.65
AP3S1-201ENST00000316788 TMEM131LA2VDJ0 1609 aa25.36■■□□□ 1.65
AP3S1-201ENST00000316788 AAMPQ13685 434 aa25.36■■□□□ 1.65
AP3S1-201ENST00000316788 DDRGK1Q96HY6 314 aa25.36■■□□□ 1.65
AP3S1-201ENST00000316788 STAG3Q9UJ98 1225 aa25.36■■□□□ 1.65
AP3S1-201ENST00000316788 A2ML1A8K2U0 1454 aa25.36■■□□□ 1.65
AP3S1-201ENST00000316788 MYO5BQ9ULV0 1848 aa25.34■■□□□ 1.65
AP3S1-201ENST00000316788 MED14O60244 1454 aa25.34■■□□□ 1.65
AP3S1-201ENST00000316788 UBR1Q8IWV7 1749 aa25.33■■□□□ 1.65
AP3S1-201ENST00000316788 ABCC11Q96J66 1382 aa25.33■■□□□ 1.65
AP3S1-201ENST00000316788 DMRT2Q9Y5R5 561 aa25.33■■□□□ 1.65
AP3S1-201ENST00000316788 ADGRB2O60241 1585 aa25.33■■□□□ 1.65
AP3S1-201ENST00000316788 LMTK3Q96Q04 1460 aa25.31■■□□□ 1.64
AP3S1-201ENST00000316788 ZNF142P52746 1687 aaPredicted RBP25.31■■□□□ 1.64
AP3S1-201ENST00000316788 ATAD2Q6PL18 1390 aa25.31■■□□□ 1.64
AP3S1-201ENST00000316788 BCAR3O75815 825 aa25.31■■□□□ 1.64
AP3S1-201ENST00000316788 MTHFSP49914 203 aa25.31■■□□□ 1.64
AP3S1-201ENST00000316788 HSPA2P54652 639 aa25.31■■□□□ 1.64
AP3S1-201ENST00000316788 NUTM2DQ5VT03 806 aaPredicted RBP25.31■■□□□ 1.64
AP3S1-201ENST00000316788 FAM161AQ3B820 660 aa25.3■■□□□ 1.64
AP3S1-201ENST00000316788 TCP11L2Q8N4U5 519 aa25.29■■□□□ 1.64
AP3S1-201ENST00000316788 NPM2Q86SE8 214 aaKnown RBP25.28■■□□□ 1.64
AP3S1-201ENST00000316788 SENP3Q9H4L4 574 aaPredicted RBP25.26■■□□□ 1.63
AP3S1-201ENST00000316788 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
AP3S1-201ENST00000316788 THEMISQ8N1K5 641 aaPredicted RBP25.25■■□□□ 1.63
AP3S1-201ENST00000316788 ANKRD26Q9UPS8 1709 aa25.25■■□□□ 1.63
AP3S1-201ENST00000316788 A0A1W2PP64 1363 aa25.24■■□□□ 1.63
AP3S1-201ENST00000316788 YTHDC2Q9H6S0 1430 aaKnown RBP25.24■■□□□ 1.63
AP3S1-201ENST00000316788 TMEM2Q9UHN6 1383 aa25.24■■□□□ 1.63
AP3S1-201ENST00000316788 CT47B1P0C2W7 299 aaPredicted RBP25.23■■□□□ 1.63
AP3S1-201ENST00000316788 RARSP54136 660 aaKnown RBP25.23■■□□□ 1.63
AP3S1-201ENST00000316788 C8orf34Q49A92 452 aa25.23■■□□□ 1.63
AP3S1-201ENST00000316788 COL3A1P02461 1466 aaPredicted RBP25.22■■□□□ 1.63
AP3S1-201ENST00000316788 LTKP29376 864 aa25.22■■□□□ 1.63
AP3S1-201ENST00000316788 CLUAP1Q96AJ1 413 aa25.22■■□□□ 1.63
AP3S1-201ENST00000316788 MYH16Q9H6N6 1097 aa25.22■■□□□ 1.63
AP3S1-201ENST00000316788 CABP2Q9NPB3 220 aa25.22■■□□□ 1.63
AP3S1-201ENST00000316788 USP35Q9P2H5 1018 aa25.22■■□□□ 1.63
AP3S1-201ENST00000316788 RIMS2Q9UQ26 1411 aa25.22■■□□□ 1.63
AP3S1-201ENST00000316788 TNNT2P45379 298 aaPredicted RBP25.21■■□□□ 1.63
AP3S1-201ENST00000316788 RTL5Q5HYW3 569 aaPredicted RBP25.21■■□□□ 1.63
AP3S1-201ENST00000316788 DLC1Q96QB1 1528 aa25.21■■□□□ 1.63
AP3S1-201ENST00000316788 PPM1GO15355 546 aaPredicted RBP25.2■■□□□ 1.63
AP3S1-201ENST00000316788 SKAP1Q86WV1 359 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms