RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 ZNF579Q8NAF0 562 aaKnown RBP8.1□□□□□ -1.11
SPATA9-202ENST00000316087 IQGAP1P46940 1657 aa8.09□□□□□ -1.11
SPATA9-202ENST00000316087 ARAP3Q8WWN8 1544 aa8.09□□□□□ -1.11
SPATA9-202ENST00000316087 KNSTRNQ9Y448 316 aa8.09□□□□□ -1.11
SPATA9-202ENST00000316087 ZMYM3Q14202 1370 aa8.08□□□□□ -1.12
SPATA9-202ENST00000316087 ABCC2Q92887 1545 aa8.08□□□□□ -1.12
SPATA9-202ENST00000316087 SYCP2Q9BX26 1530 aa8.08□□□□□ -1.12
SPATA9-202ENST00000316087 SHROOM2Q13796 1616 aa8.08□□□□□ -1.12
SPATA9-202ENST00000316087 NEFMP07197 916 aa8.08□□□□□ -1.12
SPATA9-202ENST00000316087 PLCD3Q8N3E9 789 aa8.08□□□□□ -1.12
SPATA9-202ENST00000316087 RTEL1-TNFRSF6BF6WH68 1400 aa8.08□□□□□ -1.12
SPATA9-202ENST00000316087 ASXL1Q8IXJ9 1541 aa8.07□□□□□ -1.12
SPATA9-202ENST00000316087 CEP152O94986 1710 aa8.07□□□□□ -1.12
SPATA9-202ENST00000316087 SPHKAPQ2M3C7 1700 aa8.07□□□□□ -1.12
SPATA9-202ENST00000316087 GOLGA2Q08379 1002 aa8.07□□□□□ -1.12
SPATA9-202ENST00000316087 TESK2Q96S53 571 aa8.07□□□□□ -1.12
SPATA9-202ENST00000316087 STAG3Q9UJ98 1225 aa8.07□□□□□ -1.12
SPATA9-202ENST00000316087 SCAF11Q99590 1463 aaKnown RBP8.07□□□□□ -1.12
SPATA9-202ENST00000316087 TRPM2O94759 1503 aa8.07□□□□□ -1.12
SPATA9-202ENST00000316087 HNRNPMP52272 730 aaKnown RBP eCLIP8.06□□□□□ -1.12
SPATA9-202ENST00000316087 FAM161AQ3B820 660 aa8.06□□□□□ -1.12
SPATA9-202ENST00000316087 TTC37Q6PGP7 1564 aa8.06□□□□□ -1.12
SPATA9-202ENST00000316087 MADDQ8WXG6 1647 aa8.06□□□□□ -1.12
SPATA9-202ENST00000316087 PANK3Q9H999 370 aa8.05□□□□□ -1.12
SPATA9-202ENST00000316087 PLA2R1Q13018 1463 aa8.05□□□□□ -1.12
SPATA9-202ENST00000316087 WDR7Q9Y4E6 1490 aa8.05□□□□□ -1.12
SPATA9-202ENST00000316087 KDM5AP29375 1690 aaKnown RBP8.05□□□□□ -1.12
SPATA9-202ENST00000316087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.05□□□□□ -1.12
SPATA9-202ENST00000316087 DISP3Q9P2K9 1392 aa8.05□□□□□ -1.12
SPATA9-202ENST00000316087 CGNL1Q0VF96 1302 aa8.05□□□□□ -1.12
SPATA9-202ENST00000316087 KDM2BQ8NHM5 1336 aa8.05□□□□□ -1.12
SPATA9-202ENST00000316087 MAPK8IP3Q9UPT6 1336 aa8.05□□□□□ -1.12
SPATA9-202ENST00000316087 IGSF3O75054 1194 aa8.05□□□□□ -1.12
SPATA9-202ENST00000316087 KCNV2Q8TDN2 545 aa8.05□□□□□ -1.12
SPATA9-202ENST00000316087 CREBZFQ9NS37 354 aa8.05□□□□□ -1.12
SPATA9-202ENST00000316087 NKTRP30414 1462 aaKnown RBP8.04□□□□□ -1.12
SPATA9-202ENST00000316087 KANK1Q14678 1352 aa8.04□□□□□ -1.12
SPATA9-202ENST00000316087 E9PSI1 815 aa8.04□□□□□ -1.12
SPATA9-202ENST00000316087 APBB1O00213 710 aa8.04□□□□□ -1.12
SPATA9-202ENST00000316087 TET3O43151 1660 aa8.04□□□□□ -1.12
SPATA9-202ENST00000316087 DEPDC5O75140 1603 aa8.03□□□□□ -1.12
SPATA9-202ENST00000316087 PLCH2O75038 1416 aa8.03□□□□□ -1.12
SPATA9-202ENST00000316087 ZNF521Q96K83 1311 aa8.03□□□□□ -1.12
SPATA9-202ENST00000316087 CNGB1Q14028 1251 aaPredicted RBP8.03□□□□□ -1.12
SPATA9-202ENST00000316087 PDE3AQ14432 1141 aa8.03□□□□□ -1.12
SPATA9-202ENST00000316087 GSE1Q14687 1217 aa8.03□□□□□ -1.12
SPATA9-202ENST00000316087 EFCAB2Q5VUJ9 269 aa8.03□□□□□ -1.12
SPATA9-202ENST00000316087 CRBNQ96SW2 442 aa8.03□□□□□ -1.12
SPATA9-202ENST00000316087 UHRF1BP1LA0JNW5 1464 aa8.03□□□□□ -1.12
SPATA9-202ENST00000316087 PTPRTO14522 1441 aa8.03□□□□□ -1.12
SPATA9-202ENST00000316087 VIRMAQ69YN4 1812 aaKnown RBP8.03□□□□□ -1.12
SPATA9-202ENST00000316087 SBNO2Q9Y2G9 1366 aa8.02□□□□□ -1.12
SPATA9-202ENST00000316087 PPP2R1AP30153 589 aa8.02□□□□□ -1.13
SPATA9-202ENST00000316087 BECN1Q14457 450 aa8.02□□□□□ -1.13
SPATA9-202ENST00000316087 CC2D1BQ5T0F9 858 aaKnown RBP8.02□□□□□ -1.13
SPATA9-202ENST00000316087 RNF25Q96BH1 459 aaPredicted RBP8.02□□□□□ -1.13
SPATA9-202ENST00000316087 ABCC1P33527 1531 aa8.02□□□□□ -1.13
SPATA9-202ENST00000316087 MYOM2P54296 1465 aa8.02□□□□□ -1.13
SPATA9-202ENST00000316087 RGL3Q3MIN7 710 aa8.01□□□□□ -1.13
SPATA9-202ENST00000316087 DUSP27Q5VZP5 1158 aa8.01□□□□□ -1.13
SPATA9-202ENST00000316087 GALR2O43603 387 aaPredicted RBP8.01□□□□□ -1.13
SPATA9-202ENST00000316087 SLFN5Q08AF3 891 aa8.01□□□□□ -1.13
SPATA9-202ENST00000316087 NBPF1Q3BBV0 1214 aa8.01□□□□□ -1.13
SPATA9-202ENST00000316087 TRMT2AQ8IZ69 625 aaKnown RBP8.01□□□□□ -1.13
SPATA9-202ENST00000316087 CDCA7LQ96GN5 454 aa8.01□□□□□ -1.13
SPATA9-202ENST00000316087 UPF2Q9HAU5 1272 aaKnown RBP8.01□□□□□ -1.13
SPATA9-202ENST00000316087 ADAMTS8Q9UP79 889 aa8.01□□□□□ -1.13
SPATA9-202ENST00000316087 MYO3AQ8NEV4 1616 aa8□□□□□ -1.13
SPATA9-202ENST00000316087 MYOM1P52179 1685 aa7.99□□□□□ -1.13
SPATA9-202ENST00000316087 KCTD17Q8N5Z5 321 aa7.99□□□□□ -1.13
SPATA9-202ENST00000316087 PMFBP1Q8TBY8 1022 aa7.99□□□□□ -1.13
SPATA9-202ENST00000316087 SETBP1Q9Y6X0 1596 aa7.99□□□□□ -1.13
SPATA9-202ENST00000316087 POLR3AO14802 1390 aaPredicted RBP7.99□□□□□ -1.13
SPATA9-202ENST00000316087 IL27Q8NEV9 243 aa7.98□□□□□ -1.13
SPATA9-202ENST00000316087 SALL2Q9Y467 1007 aaPredicted RBP7.98□□□□□ -1.13
SPATA9-202ENST00000316087 USP32Q8NFA0 1604 aa7.98□□□□□ -1.13
SPATA9-202ENST00000316087 MAP3K4Q9Y6R4 1608 aa7.98□□□□□ -1.13
SPATA9-202ENST00000316087 VWDEQ8N2E2 1590 aa7.98□□□□□ -1.13
SPATA9-202ENST00000316087 CT47B1P0C2W7 299 aaPredicted RBP7.97□□□□□ -1.13
SPATA9-202ENST00000316087 NFKBIBQ15653 356 aa7.97□□□□□ -1.13
SPATA9-202ENST00000316087 PUS7Q96PZ0 661 aaKnown RBP7.97□□□□□ -1.13
SPATA9-202ENST00000316087 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
SPATA9-202ENST00000316087 ZFYVE16Q7Z3T8 1539 aa7.97□□□□□ -1.13
SPATA9-202ENST00000316087 KIF1BO60333 1816 aa7.97□□□□□ -1.13
SPATA9-202ENST00000316087 PLEKHH1Q9ULM0 1364 aa7.96□□□□□ -1.13
SPATA9-202ENST00000316087 ADGRL1O94910 1474 aa7.96□□□□□ -1.13
SPATA9-202ENST00000316087 SPAG9O60271 1321 aaKnown RBP7.96□□□□□ -1.13
SPATA9-202ENST00000316087 CLTCL1P53675 1640 aa7.96□□□□□ -1.14
SPATA9-202ENST00000316087 CHD1O14646 1710 aa7.96□□□□□ -1.14
SPATA9-202ENST00000316087 RAD21O60216 631 aa7.96□□□□□ -1.14
SPATA9-202ENST00000316087 PLIN1O60240 522 aa7.96□□□□□ -1.14
SPATA9-202ENST00000316087 C8orf34Q49A92 452 aa7.96□□□□□ -1.14
SPATA9-202ENST00000316087 L1TD1Q5T7N2 865 aaKnown RBP7.96□□□□□ -1.14
SPATA9-202ENST00000316087 WDR70Q9NW82 654 aa7.96□□□□□ -1.14
SPATA9-202ENST00000316087 NSD2O96028 1365 aa7.96□□□□□ -1.14
SPATA9-202ENST00000316087 INO80Q9ULG1 1556 aaPredicted RBP7.96□□□□□ -1.14
SPATA9-202ENST00000316087 CENPJQ9HC77 1338 aaPredicted RBP7.95□□□□□ -1.14
SPATA9-202ENST00000316087 ZCCHC11Q5TAX3 1644 aaKnown RBP7.95□□□□□ -1.14
SPATA9-202ENST00000316087 CANXP27824 592 aaKnown RBP7.95□□□□□ -1.14
SPATA9-202ENST00000316087 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms