RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 C11orf95C9JLR9 678 aaPredicted RBP16.82■□□□□ 0.28
SPAST-201ENST00000315285 HSP90AA2PQ14568 343 aaPredicted RBP16.82■□□□□ 0.28
SPAST-201ENST00000315285 TTC5Q8N0Z6 440 aa16.82■□□□□ 0.28
SPAST-201ENST00000315285 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
SPAST-201ENST00000315285 TSR2Q969E8 191 aaKnown RBP16.81■□□□□ 0.28
SPAST-201ENST00000315285 DDX58O95786 925 aaKnown RBP16.81■□□□□ 0.28
SPAST-201ENST00000315285 GOLGA6L19H0YKK7 550 aa16.8■□□□□ 0.28
SPAST-201ENST00000315285 KIAA0586Q9BVV6 1533 aa16.8■□□□□ 0.28
SPAST-201ENST00000315285 HSP90AB4PQ58FF6 505 aa16.8■□□□□ 0.28
SPAST-201ENST00000315285 MCTP1Q6DN14 999 aa16.8■□□□□ 0.28
SPAST-201ENST00000315285 PRAM1Q96QH2 718 aa16.8■□□□□ 0.28
SPAST-201ENST00000315285 NINLQ9Y2I6 1382 aa16.79■□□□□ 0.28
SPAST-201ENST00000315285 BECN2A8MW95 431 aa16.79■□□□□ 0.28
SPAST-201ENST00000315285 PSME1Q06323 249 aa16.79■□□□□ 0.28
SPAST-201ENST00000315285 G3BP1Q13283 466 aaKnown RBP eCLIP16.79■□□□□ 0.28
SPAST-201ENST00000315285 WDR63Q8IWG1 891 aa16.79■□□□□ 0.28
SPAST-201ENST00000315285 PTPN23Q9H3S7 1636 aa16.79■□□□□ 0.28
SPAST-201ENST00000315285 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
SPAST-201ENST00000315285 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
SPAST-201ENST00000315285 RNF20Q5VTR2 975 aa16.78■□□□□ 0.28
SPAST-201ENST00000315285 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
SPAST-201ENST00000315285 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
SPAST-201ENST00000315285 LRRFIP1Q32MZ4 808 aaKnown RBP16.77■□□□□ 0.28
SPAST-201ENST00000315285 IQGAP2Q13576 1575 aa16.77■□□□□ 0.27
SPAST-201ENST00000315285 SMC3Q9UQE7 1217 aa16.77■□□□□ 0.27
SPAST-201ENST00000315285 UBTFL1P0CB47 393 aaPredicted RBP16.77■□□□□ 0.27
SPAST-201ENST00000315285 ERC2O15083 957 aa16.76■□□□□ 0.27
SPAST-201ENST00000315285 ABCC5O15440 1437 aa16.76■□□□□ 0.27
SPAST-201ENST00000315285 VPS37CA5D8V6 355 aaPredicted RBP16.76■□□□□ 0.27
SPAST-201ENST00000315285 CT47B1P0C2W7 299 aaPredicted RBP16.76■□□□□ 0.27
SPAST-201ENST00000315285 MRE11P49959 708 aa16.76■□□□□ 0.27
SPAST-201ENST00000315285 GCC1Q96CN9 775 aa16.76■□□□□ 0.27
SPAST-201ENST00000315285 TRAK2O60296 914 aa16.75■□□□□ 0.27
SPAST-201ENST00000315285 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
SPAST-201ENST00000315285 GTF2E1P29083 439 aaPredicted RBP16.75■□□□□ 0.27
SPAST-201ENST00000315285 NLRP6P59044 892 aa16.75■□□□□ 0.27
SPAST-201ENST00000315285 BICRAQ9NZM4 1560 aa16.74■□□□□ 0.27
SPAST-201ENST00000315285 GNAI3P08754 354 aa16.74■□□□□ 0.27
SPAST-201ENST00000315285 CUL7Q14999 1698 aa16.74■□□□□ 0.27
SPAST-201ENST00000315285 CPLX2Q6PUV4 134 aaKnown RBP16.74■□□□□ 0.27
SPAST-201ENST00000315285 ATF7IPQ6VMQ6 1270 aa16.74■□□□□ 0.27
SPAST-201ENST00000315285 CREBRFQ8IUR6 639 aa16.74■□□□□ 0.27
SPAST-201ENST00000315285 MVPQ14764 893 aaKnown RBP16.74■□□□□ 0.27
SPAST-201ENST00000315285 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
SPAST-201ENST00000315285 CAMSAP2Q08AD1 1489 aa16.73■□□□□ 0.27
SPAST-201ENST00000315285 CLSTN1O94985 981 aa16.73■□□□□ 0.27
SPAST-201ENST00000315285 NUTM2GQ5VZR2 741 aa16.73■□□□□ 0.27
SPAST-201ENST00000315285 BICD2Q8TD16 824 aa16.73■□□□□ 0.27
SPAST-201ENST00000315285 CABP1Q9NZU7 370 aa16.73■□□□□ 0.27
SPAST-201ENST00000315285 NCOA1Q15788 1441 aa16.72■□□□□ 0.27
SPAST-201ENST00000315285 GAS2L2Q8NHY3 880 aa16.72■□□□□ 0.27
SPAST-201ENST00000315285 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
SPAST-201ENST00000315285 CCDC141Q6ZP82 1450 aa16.72■□□□□ 0.27
SPAST-201ENST00000315285 CDK19Q9BWU1 502 aa16.72■□□□□ 0.27
SPAST-201ENST00000315285 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
SPAST-201ENST00000315285 FAM43AQ8N2R8 423 aa16.71■□□□□ 0.27
SPAST-201ENST00000315285 SLC52A1Q9NWF4 448 aa16.71■□□□□ 0.27
SPAST-201ENST00000315285 RABEP1Q15276 862 aa16.71■□□□□ 0.26
SPAST-201ENST00000315285 WWC1Q8IX03 1113 aa16.71■□□□□ 0.26
SPAST-201ENST00000315285 CPLX1O14810 134 aa16.7■□□□□ 0.26
SPAST-201ENST00000315285 SYNE3Q6ZMZ3 975 aa16.7■□□□□ 0.26
SPAST-201ENST00000315285 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
SPAST-201ENST00000315285 MAGI1Q96QZ7 1491 aaPredicted RBP16.7■□□□□ 0.26
SPAST-201ENST00000315285 NASPP49321 788 aaPredicted RBP16.7■□□□□ 0.26
SPAST-201ENST00000315285 SURF6O75683 361 aaKnown RBP16.69■□□□□ 0.26
SPAST-201ENST00000315285 EVA1CP58658 441 aa16.69■□□□□ 0.26
SPAST-201ENST00000315285 AKAP17AQ02040 695 aaKnown RBP16.69■□□□□ 0.26
SPAST-201ENST00000315285 NEK4P51957 841 aa16.69■□□□□ 0.26
SPAST-201ENST00000315285 RIC3Q7Z5B4 369 aa16.69■□□□□ 0.26
SPAST-201ENST00000315285 RPGRIP1LQ68CZ1 1315 aa16.69■□□□□ 0.26
SPAST-201ENST00000315285 TPM3P06753 285 aa16.68■□□□□ 0.26
SPAST-201ENST00000315285 AIMP1Q12904 312 aaKnown RBP16.68■□□□□ 0.26
SPAST-201ENST00000315285 TXNDC2Q86VQ3 553 aa16.68■□□□□ 0.26
SPAST-201ENST00000315285 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
SPAST-201ENST00000315285 RPRD2Q5VT52 1461 aaKnown RBP16.68■□□□□ 0.26
SPAST-201ENST00000315285 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.68■□□□□ 0.26
SPAST-201ENST00000315285 SULT6B1Q6IMI4 303 aa16.68■□□□□ 0.26
SPAST-201ENST00000315285 CLASRPQ8N2M8 674 aaKnown RBP16.68■□□□□ 0.26
SPAST-201ENST00000315285 TMX4Q9H1E5 349 aaPredicted RBP16.68■□□□□ 0.26
SPAST-201ENST00000315285 NSD3Q9BZ95 1437 aa16.67■□□□□ 0.26
SPAST-201ENST00000315285 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
SPAST-201ENST00000315285 APPP05067 770 aa16.67■□□□□ 0.26
SPAST-201ENST00000315285 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
SPAST-201ENST00000315285 TRIM29Q14134 588 aa16.67■□□□□ 0.26
SPAST-201ENST00000315285 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
SPAST-201ENST00000315285 GNAI2P04899 355 aa16.66■□□□□ 0.26
SPAST-201ENST00000315285 TRDNQ13061 729 aa16.66■□□□□ 0.26
SPAST-201ENST00000315285 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
SPAST-201ENST00000315285 TPD52L1Q16890 204 aaPredicted RBP16.66■□□□□ 0.26
SPAST-201ENST00000315285 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
SPAST-201ENST00000315285 MCM2P49736 904 aa16.66■□□□□ 0.26
SPAST-201ENST00000315285 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.66■□□□□ 0.26
SPAST-201ENST00000315285 ATAD2Q6PL18 1390 aa16.66■□□□□ 0.26
SPAST-201ENST00000315285 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
SPAST-201ENST00000315285 CHD1LQ86WJ1 897 aa16.65■□□□□ 0.26
SPAST-201ENST00000315285 ABTB2Q8N961 1025 aa16.65■□□□□ 0.26
SPAST-201ENST00000315285 ZNF692Q9BU19 519 aaPredicted RBP16.65■□□□□ 0.26
SPAST-201ENST00000315285 PES1O00541 588 aaKnown RBP16.64■□□□□ 0.25
SPAST-201ENST00000315285 MBD3O95983 291 aa16.64■□□□□ 0.25
SPAST-201ENST00000315285 SASS6Q6UVJ0 657 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms