RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 FRAT2O75474 233 aaPredicted RBP16.32■□□□□ 0.2
TNIP1-201ENST00000315050 SEC24BO95487 1268 aa16.32■□□□□ 0.2
TNIP1-201ENST00000315050 RARSP54136 660 aaKnown RBP16.32■□□□□ 0.2
TNIP1-201ENST00000315050 EFCAB6Q5THR3 1501 aa16.31■□□□□ 0.2
TNIP1-201ENST00000315050 KIF1BO60333 1816 aa16.31■□□□□ 0.2
TNIP1-201ENST00000315050 ABCA9Q8IUA7 1624 aa16.3■□□□□ 0.2
TNIP1-201ENST00000315050 RLBP1P12271 317 aa16.3■□□□□ 0.2
TNIP1-201ENST00000315050 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
TNIP1-201ENST00000315050 SBNO2Q9Y2G9 1366 aa16.3■□□□□ 0.2
TNIP1-201ENST00000315050 USP19O94966 1318 aa16.28■□□□□ 0.2
TNIP1-201ENST00000315050 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
TNIP1-201ENST00000315050 C14orf93Q9H972 538 aaKnown RBP16.28■□□□□ 0.2
TNIP1-201ENST00000315050 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
TNIP1-201ENST00000315050 PPRC1Q5VV67 1664 aaKnown RBP16.28■□□□□ 0.2
TNIP1-201ENST00000315050 MAPK8IP3Q9UPT6 1336 aa16.28■□□□□ 0.2
TNIP1-201ENST00000315050 PCDHB15Q9Y5E8 787 aa16.28■□□□□ 0.2
TNIP1-201ENST00000315050 CFAP65Q6ZU64 1925 aaKnown RBP16.28■□□□□ 0.2
TNIP1-201ENST00000315050 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
TNIP1-201ENST00000315050 U2AF1L5P0DN76 240 aaPredicted RBP16.27■□□□□ 0.2
TNIP1-201ENST00000315050 U2AF1Q01081 240 aaKnown RBP eCLIP16.27■□□□□ 0.2
TNIP1-201ENST00000315050 CFAP53Q96M91 514 aa16.27■□□□□ 0.2
TNIP1-201ENST00000315050 NRXN1Q9ULB1 1477 aa16.27■□□□□ 0.19
TNIP1-201ENST00000315050 NINLQ9Y2I6 1382 aa16.27■□□□□ 0.19
TNIP1-201ENST00000315050 ASXL2Q76L83 1435 aa16.25■□□□□ 0.19
TNIP1-201ENST00000315050 NPATQ14207 1427 aa16.25■□□□□ 0.19
TNIP1-201ENST00000315050 PMFBP1Q8TBY8 1022 aa16.25■□□□□ 0.19
TNIP1-201ENST00000315050 SLKQ9H2G2 1235 aaPredicted RBP16.25■□□□□ 0.19
TNIP1-201ENST00000315050 WDR63Q8IWG1 891 aa16.24■□□□□ 0.19
TNIP1-201ENST00000315050 IFT172Q9UG01 1749 aa16.24■□□□□ 0.19
TNIP1-201ENST00000315050 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
TNIP1-201ENST00000315050 ADGRB3O60242 1522 aa16.23■□□□□ 0.19
TNIP1-201ENST00000315050 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
TNIP1-201ENST00000315050 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
TNIP1-201ENST00000315050 SHPRHQ149N8 1683 aa16.23■□□□□ 0.19
TNIP1-201ENST00000315050 KIDINS220Q9ULH0 1771 aa16.23■□□□□ 0.19
TNIP1-201ENST00000315050 PDZRN3Q9UPQ7 1066 aa16.23■□□□□ 0.19
TNIP1-201ENST00000315050 TSR2Q969E8 191 aaKnown RBP16.22■□□□□ 0.19
TNIP1-201ENST00000315050 IQSEC2Q5JU85 1478 aa16.21■□□□□ 0.19
TNIP1-201ENST00000315050 ZNF518AQ6AHZ1 1483 aa16.21■□□□□ 0.19
TNIP1-201ENST00000315050 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.19
TNIP1-201ENST00000315050 MYH16Q9H6N6 1097 aa16.21■□□□□ 0.19
TNIP1-201ENST00000315050 EVC2Q86UK5 1308 aa16.21■□□□□ 0.19
TNIP1-201ENST00000315050 QRICH2Q9H0J4 1663 aa16.21■□□□□ 0.19
TNIP1-201ENST00000315050 SETBP1Q9Y6X0 1596 aa16.21■□□□□ 0.18
TNIP1-201ENST00000315050 BECN1Q14457 450 aa16.2■□□□□ 0.18
TNIP1-201ENST00000315050 FTSJ3Q8IY81 847 aaKnown RBP16.2■□□□□ 0.18
TNIP1-201ENST00000315050 STK26Q9P289 416 aa16.2■□□□□ 0.18
TNIP1-201ENST00000315050 ADGRB1O14514 1584 aa16.2■□□□□ 0.18
TNIP1-201ENST00000315050 UPF2Q9HAU5 1272 aaKnown RBP16.19■□□□□ 0.18
TNIP1-201ENST00000315050 CCDC27Q2M243 656 aa16.19■□□□□ 0.18
TNIP1-201ENST00000315050 RWDD1Q9H446 243 aaPredicted RBP16.19■□□□□ 0.18
TNIP1-201ENST00000315050 LMTK2Q8IWU2 1503 aa16.18■□□□□ 0.18
TNIP1-201ENST00000315050 GGNBP2Q9H3C7 697 aa16.18■□□□□ 0.18
TNIP1-201ENST00000315050 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
TNIP1-201ENST00000315050 MVPQ14764 893 aaKnown RBP16.17■□□□□ 0.18
TNIP1-201ENST00000315050 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
TNIP1-201ENST00000315050 ZKSCAN2Q63HK3 967 aa16.17■□□□□ 0.18
TNIP1-201ENST00000315050 ANKRD36BQ8N2N9 1353 aa16.17■□□□□ 0.18
TNIP1-201ENST00000315050 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
TNIP1-201ENST00000315050 RPGRIP1LQ68CZ1 1315 aa16.16■□□□□ 0.18
TNIP1-201ENST00000315050 VGFO15240 615 aaPredicted RBP16.16■□□□□ 0.18
TNIP1-201ENST00000315050 EXOSC9Q06265 439 aaKnown RBP16.16■□□□□ 0.18
TNIP1-201ENST00000315050 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
TNIP1-201ENST00000315050 AAMPQ13685 434 aa16.15■□□□□ 0.18
TNIP1-201ENST00000315050 SPRYD3Q8NCJ5 442 aa16.15■□□□□ 0.18
TNIP1-201ENST00000315050 NLRP1Q9C000 1473 aa16.15■□□□□ 0.18
TNIP1-201ENST00000315050 RAPGEF3O95398 923 aa16.15■□□□□ 0.18
TNIP1-201ENST00000315050 PPLO60437 1756 aa16.15■□□□□ 0.18
TNIP1-201ENST00000315050 TBC1D32Q96NH3 1257 aa16.14■□□□□ 0.17
TNIP1-201ENST00000315050 POGKQ9P215 609 aa16.14■□□□□ 0.17
TNIP1-201ENST00000315050 ZC3H13Q5T200 1668 aaKnown RBP16.14■□□□□ 0.17
TNIP1-201ENST00000315050 TULP4Q9NRJ4 1543 aa16.13■□□□□ 0.17
TNIP1-201ENST00000315050 VIRMAQ69YN4 1812 aaKnown RBP16.13■□□□□ 0.17
TNIP1-201ENST00000315050 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
TNIP1-201ENST00000315050 CD109Q6YHK3 1445 aa16.13■□□□□ 0.17
TNIP1-201ENST00000315050 A0A1W2PP64 1363 aa16.13■□□□□ 0.17
TNIP1-201ENST00000315050 GLI2P10070 1586 aa16.12■□□□□ 0.17
TNIP1-201ENST00000315050 FRMPD1Q5SYB0 1578 aa16.12■□□□□ 0.17
TNIP1-201ENST00000315050 TRIM27P14373 513 aa16.12■□□□□ 0.17
TNIP1-201ENST00000315050 TBC1D2Q9BYX2 928 aa16.12■□□□□ 0.17
TNIP1-201ENST00000315050 POGZQ7Z3K3 1410 aa16.12■□□□□ 0.17
TNIP1-201ENST00000315050 TMPOP42166 694 aaKnown RBP16.12■□□□□ 0.17
TNIP1-201ENST00000315050 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
TNIP1-201ENST00000315050 IDI1Q13907 227 aa16.11■□□□□ 0.17
TNIP1-201ENST00000315050 MINK1Q8N4C8 1332 aaPredicted RBP16.11■□□□□ 0.17
TNIP1-201ENST00000315050 NSD2O96028 1365 aa16.11■□□□□ 0.17
TNIP1-201ENST00000315050 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.1■□□□□ 0.17
TNIP1-201ENST00000315050 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
TNIP1-201ENST00000315050 MFAP1P55081 439 aaKnown RBP16.1■□□□□ 0.17
TNIP1-201ENST00000315050 PLEKHF1Q96S99 279 aa16.1■□□□□ 0.17
TNIP1-201ENST00000315050 ABCC3O15438 1527 aa16.1■□□□□ 0.17
TNIP1-201ENST00000315050 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
TNIP1-201ENST00000315050 USP32Q8NFA0 1604 aa16.09■□□□□ 0.17
TNIP1-201ENST00000315050 RIPK4P57078 832 aa16.09■□□□□ 0.17
TNIP1-201ENST00000315050 ANTXR1Q9H6X2 564 aa16.09■□□□□ 0.17
TNIP1-201ENST00000315050 ATF7IPQ6VMQ6 1270 aa16.08■□□□□ 0.16
TNIP1-201ENST00000315050 PUS7Q96PZ0 661 aaKnown RBP16.08■□□□□ 0.16
TNIP1-201ENST00000315050 MLH3Q9UHC1 1453 aa16.08■□□□□ 0.16
TNIP1-201ENST00000315050 FYB1O15117 783 aa16.08■□□□□ 0.16
TNIP1-201ENST00000315050 ARXQ96QS3 562 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms