RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 KDM2BQ8NHM5 1336 aa11.38□□□□□ -0.59
BDNF-201ENST00000314915 KRT222Q8N1A0 295 aa11.38□□□□□ -0.59
BDNF-201ENST00000314915 NBPF3Q9H094 633 aa11.38□□□□□ -0.59
BDNF-201ENST00000314915 MORC2Q9Y6X9 1032 aaPredicted RBP11.38□□□□□ -0.59
BDNF-201ENST00000314915 PRDM2Q13029 1718 aa11.38□□□□□ -0.59
BDNF-201ENST00000314915 CWC22Q9HCG8 908 aaKnown RBP11.38□□□□□ -0.59
BDNF-201ENST00000314915 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
BDNF-201ENST00000314915 ERICH4A6NGS2 130 aa11.37□□□□□ -0.59
BDNF-201ENST00000314915 RGL3Q3MIN7 710 aa11.37□□□□□ -0.59
BDNF-201ENST00000314915 CALR3Q96L12 384 aaKnown RBP11.37□□□□□ -0.59
BDNF-201ENST00000314915 DDX41Q9UJV9 622 aaKnown RBP11.37□□□□□ -0.59
BDNF-201ENST00000314915 RAB3GAP2Q9H2M9 1393 aa11.37□□□□□ -0.59
BDNF-201ENST00000314915 SYCP1Q15431 976 aa11.37□□□□□ -0.59
BDNF-201ENST00000314915 ZNF513Q8N8E2 541 aaPredicted RBP11.36□□□□□ -0.59
BDNF-201ENST00000314915 TBC1D2Q9BYX2 928 aa11.36□□□□□ -0.59
BDNF-201ENST00000314915 USP19O94966 1318 aa11.36□□□□□ -0.59
BDNF-201ENST00000314915 JRKLQ9Y4A0 524 aa11.36□□□□□ -0.59
BDNF-201ENST00000314915 TRERF1Q96PN7 1200 aa11.36□□□□□ -0.59
BDNF-201ENST00000314915 PDE3BQ13370 1112 aa11.36□□□□□ -0.59
BDNF-201ENST00000314915 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
BDNF-201ENST00000314915 HNRNPH2P55795 449 aaKnown RBP11.35□□□□□ -0.59
BDNF-201ENST00000314915 NOM1Q5C9Z4 860 aaKnown RBP11.35□□□□□ -0.59
BDNF-201ENST00000314915 CCNB3Q8WWL7 1395 aa11.35□□□□□ -0.59
BDNF-201ENST00000314915 REC8O95072 547 aa11.35□□□□□ -0.59
BDNF-201ENST00000314915 RPAINQ86UA6 219 aa11.35□□□□□ -0.59
BDNF-201ENST00000314915 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
BDNF-201ENST00000314915 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
BDNF-201ENST00000314915 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
BDNF-201ENST00000314915 TSC1Q92574 1164 aa11.34□□□□□ -0.59
BDNF-201ENST00000314915 KLHL33A6NCF5 533 aa11.34□□□□□ -0.59
BDNF-201ENST00000314915 ATP6V1AP38606 617 aa11.34□□□□□ -0.59
BDNF-201ENST00000314915 KANK4Q5T7N3 995 aaPredicted RBP11.34□□□□□ -0.59
BDNF-201ENST00000314915 CCDC189A1A4V9 331 aa11.34□□□□□ -0.59
BDNF-201ENST00000314915 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
BDNF-201ENST00000314915 NOL10Q9BSC4 688 aaKnown RBP11.34□□□□□ -0.59
BDNF-201ENST00000314915 CTNNA3Q9UI47 895 aa11.34□□□□□ -0.59
BDNF-201ENST00000314915 CIZ1Q9ULV3 898 aaPredicted RBP11.34□□□□□ -0.59
BDNF-201ENST00000314915 HSPA5P11021 654 aaKnown RBP11.33□□□□□ -0.6
BDNF-201ENST00000314915 MUM1L1Q5H9M0 696 aa11.33□□□□□ -0.6
BDNF-201ENST00000314915 TMX1Q9H3N1 280 aa11.33□□□□□ -0.6
BDNF-201ENST00000314915 A0A1B0GUL7 405 aa11.33□□□□□ -0.6
BDNF-201ENST00000314915 CWC15Q9P013 229 aaKnown RBP11.33□□□□□ -0.6
BDNF-201ENST00000314915 CCDC144AA2RUR9 1427 aa11.33□□□□□ -0.6
BDNF-201ENST00000314915 NRDCO43847 1150 aa11.33□□□□□ -0.6
BDNF-201ENST00000314915 ZNF445P59923 1031 aa11.33□□□□□ -0.6
BDNF-201ENST00000314915 BIRC2Q13490 618 aa11.33□□□□□ -0.6
BDNF-201ENST00000314915 PNISRQ8TF01 805 aaKnown RBP11.32□□□□□ -0.6
BDNF-201ENST00000314915 TNNT1P13805 278 aa11.32□□□□□ -0.6
BDNF-201ENST00000314915 GSCP56915 257 aaPredicted RBP11.32□□□□□ -0.6
BDNF-201ENST00000314915 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
BDNF-201ENST00000314915 H0YHG0 523 aa11.32□□□□□ -0.6
BDNF-201ENST00000314915 CYP2C19P33261 490 aa11.32□□□□□ -0.6
BDNF-201ENST00000314915 SARNPP82979 210 aaKnown RBP11.32□□□□□ -0.6
BDNF-201ENST00000314915 MTA1Q13330 715 aa11.32□□□□□ -0.6
BDNF-201ENST00000314915 SKAP1Q86WV1 359 aa11.32□□□□□ -0.6
BDNF-201ENST00000314915 PIBF1Q8WXW3 757 aa11.32□□□□□ -0.6
BDNF-201ENST00000314915 ATP2B1P20020 1258 aa11.31□□□□□ -0.6
BDNF-201ENST00000314915 ATP1B4Q9UN42 357 aaPredicted RBP11.31□□□□□ -0.6
BDNF-201ENST00000314915 CTAGE5O15320 804 aa11.31□□□□□ -0.6
BDNF-201ENST00000314915 CTIFO43310 598 aaKnown RBP11.31□□□□□ -0.6
BDNF-201ENST00000314915 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
BDNF-201ENST00000314915 DNAJC21Q5F1R6 531 aaKnown RBP11.31□□□□□ -0.6
BDNF-201ENST00000314915 IPO7O95373 1038 aaKnown RBP11.31□□□□□ -0.6
BDNF-201ENST00000314915 CRBNQ96SW2 442 aa11.31□□□□□ -0.6
BDNF-201ENST00000314915 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
BDNF-201ENST00000314915 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
BDNF-201ENST00000314915 MYOM3Q5VTT5 1437 aa11.3□□□□□ -0.6
BDNF-201ENST00000314915 SETD5Q9C0A6 1442 aa11.3□□□□□ -0.6
BDNF-201ENST00000314915 NOLC1Q14978 699 aaKnown RBP eCLIP11.3□□□□□ -0.6
BDNF-201ENST00000314915 KLHL40Q2TBA0 621 aa11.3□□□□□ -0.6
BDNF-201ENST00000314915 DRC1Q96MC2 740 aa11.3□□□□□ -0.6
BDNF-201ENST00000314915 CCDC196A0A1B0GTZ2 297 aa11.3□□□□□ -0.6
BDNF-201ENST00000314915 TXLNBQ8N3L3 684 aa11.3□□□□□ -0.6
BDNF-201ENST00000314915 HDAC1Q13547 482 aaPredicted RBP11.29□□□□□ -0.6
BDNF-201ENST00000314915 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
BDNF-201ENST00000314915 VIRMAQ69YN4 1812 aaKnown RBP11.29□□□□□ -0.6
BDNF-201ENST00000314915 MROH2BQ7Z745 1585 aa11.29□□□□□ -0.6
BDNF-201ENST00000314915 SETDB1Q15047 1291 aa11.29□□□□□ -0.6
BDNF-201ENST00000314915 ANKRD23Q86SG2 305 aa11.29□□□□□ -0.6
BDNF-201ENST00000314915 PAXBP1Q9Y5B6 917 aa11.29□□□□□ -0.6
BDNF-201ENST00000314915 MAPK8IP3Q9UPT6 1336 aa11.29□□□□□ -0.6
BDNF-201ENST00000314915 MYO1CO00159 1063 aa11.28□□□□□ -0.6
BDNF-201ENST00000314915 JARID2Q92833 1246 aaPredicted RBP11.28□□□□□ -0.6
BDNF-201ENST00000314915 TBC1D32Q96NH3 1257 aa11.28□□□□□ -0.6
BDNF-201ENST00000314915 NUCKS1Q9H1E3 243 aaKnown RBP11.28□□□□□ -0.6
BDNF-201ENST00000314915 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.28□□□□□ -0.6
BDNF-201ENST00000314915 FKBP5Q13451 457 aaPredicted RBP11.28□□□□□ -0.6
BDNF-201ENST00000314915 TSHZ1Q6ZSZ6 1077 aa11.28□□□□□ -0.6
BDNF-201ENST00000314915 TNPO1Q92973 898 aaKnown RBP11.28□□□□□ -0.6
BDNF-201ENST00000314915 MAP2K2P36507 400 aa11.28□□□□□ -0.6
BDNF-201ENST00000314915 TTC31Q49AM3 519 aaPredicted RBP11.28□□□□□ -0.6
BDNF-201ENST00000314915 C10orf67Q8IYJ2 551 aa11.28□□□□□ -0.6
BDNF-201ENST00000314915 ANKRD20A12PQ8NF67 263 aa11.28□□□□□ -0.6
BDNF-201ENST00000314915 IPO8O15397 1037 aaKnown RBP11.28□□□□□ -0.6
BDNF-201ENST00000314915 TEX35Q5T0J7 233 aa11.28□□□□□ -0.6
BDNF-201ENST00000314915 KIAA1107Q9UPP5 1409 aa11.27□□□□□ -0.6
BDNF-201ENST00000314915 HSP90AB4PQ58FF6 505 aa11.27□□□□□ -0.6
BDNF-201ENST00000314915 TMTC2Q8N394 836 aa11.27□□□□□ -0.6
BDNF-201ENST00000314915 TBC1D22AQ8WUA7 517 aa11.27□□□□□ -0.6
BDNF-201ENST00000314915 BORCS6Q96GS4 357 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms