RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 QRICH2Q9H0J4 1663 aa17.76■□□□□ 0.43
MKS1-201ENST00000313863 MORC1Q86VD1 984 aa17.76■□□□□ 0.43
MKS1-201ENST00000313863 ADGRF5Q8IZF2 1346 aa17.75■□□□□ 0.43
MKS1-201ENST00000313863 IQSEC2Q5JU85 1478 aa17.75■□□□□ 0.43
MKS1-201ENST00000313863 CFAP53Q96M91 514 aa17.74■□□□□ 0.43
MKS1-201ENST00000313863 ADGRB3O60242 1522 aa17.74■□□□□ 0.43
MKS1-201ENST00000313863 PPRC1Q5VV67 1664 aaKnown RBP17.74■□□□□ 0.43
MKS1-201ENST00000313863 NSD3Q9BZ95 1437 aa17.74■□□□□ 0.43
MKS1-201ENST00000313863 ADGRL1O94910 1474 aa17.73■□□□□ 0.43
MKS1-201ENST00000313863 FRAT2O75474 233 aaPredicted RBP17.73■□□□□ 0.43
MKS1-201ENST00000313863 CCDC27Q2M243 656 aa17.73■□□□□ 0.43
MKS1-201ENST00000313863 COG6Q9Y2V7 657 aa17.73■□□□□ 0.43
MKS1-201ENST00000313863 PPLO60437 1756 aa17.73■□□□□ 0.43
MKS1-201ENST00000313863 UGGT1Q9NYU2 1555 aa17.73■□□□□ 0.43
MKS1-201ENST00000313863 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
MKS1-201ENST00000313863 RARSP54136 660 aaKnown RBP17.71■□□□□ 0.43
MKS1-201ENST00000313863 PANK1Q8TE04 598 aa17.71■□□□□ 0.43
MKS1-201ENST00000313863 USP19O94966 1318 aa17.71■□□□□ 0.43
MKS1-201ENST00000313863 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
MKS1-201ENST00000313863 RWDD1Q9H446 243 aaPredicted RBP17.7■□□□□ 0.42
MKS1-201ENST00000313863 MYH16Q9H6N6 1097 aa17.7■□□□□ 0.42
MKS1-201ENST00000313863 RTN4Q9NQC3 1192 aaKnown RBP17.7■□□□□ 0.42
MKS1-201ENST00000313863 NSD2O96028 1365 aa17.7■□□□□ 0.42
MKS1-201ENST00000313863 PUS7Q96PZ0 661 aaKnown RBP17.7■□□□□ 0.42
MKS1-201ENST00000313863 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
MKS1-201ENST00000313863 KIDINS220Q9ULH0 1771 aa17.69■□□□□ 0.42
MKS1-201ENST00000313863 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
MKS1-201ENST00000313863 NOS1P29475 1434 aa17.69■□□□□ 0.42
MKS1-201ENST00000313863 TCP11L2Q8N4U5 519 aa17.68■□□□□ 0.42
MKS1-201ENST00000313863 CT47B1P0C2W7 299 aaPredicted RBP17.68■□□□□ 0.42
MKS1-201ENST00000313863 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
MKS1-201ENST00000313863 RPGRIP1LQ68CZ1 1315 aa17.67■□□□□ 0.42
MKS1-201ENST00000313863 C14orf93Q9H972 538 aaKnown RBP17.65■□□□□ 0.42
MKS1-201ENST00000313863 ADGRB1O14514 1584 aa17.65■□□□□ 0.42
MKS1-201ENST00000313863 TBC1D32Q96NH3 1257 aa17.64■□□□□ 0.41
MKS1-201ENST00000313863 ADGRB2O60241 1585 aa17.64■□□□□ 0.41
MKS1-201ENST00000313863 NEUROD2Q15784 382 aa17.63■□□□□ 0.41
MKS1-201ENST00000313863 L1TD1Q5T7N2 865 aaKnown RBP17.63■□□□□ 0.41
MKS1-201ENST00000313863 CFAP74Q9C0B2 1584 aa17.62■□□□□ 0.41
MKS1-201ENST00000313863 SEC24BO95487 1268 aa17.62■□□□□ 0.41
MKS1-201ENST00000313863 PDZRN3Q9UPQ7 1066 aa17.62■□□□□ 0.41
MKS1-201ENST00000313863 FAM43AQ8N2R8 423 aa17.62■□□□□ 0.41
MKS1-201ENST00000313863 MTHFSP49914 203 aa17.61■□□□□ 0.41
MKS1-201ENST00000313863 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
MKS1-201ENST00000313863 ZKSCAN2Q63HK3 967 aa17.61■□□□□ 0.41
MKS1-201ENST00000313863 SLC12A5Q9H2X9 1139 aa17.61■□□□□ 0.41
MKS1-201ENST00000313863 TRAK1Q9UPV9 953 aa17.61■□□□□ 0.41
MKS1-201ENST00000313863 RRP7AQ9Y3A4 280 aaKnown RBP17.61■□□□□ 0.41
MKS1-201ENST00000313863 PCDHB15Q9Y5E8 787 aa17.61■□□□□ 0.41
MKS1-201ENST00000313863 EVC2Q86UK5 1308 aa17.61■□□□□ 0.41
MKS1-201ENST00000313863 ANKRD36BQ8N2N9 1353 aa17.61■□□□□ 0.41
MKS1-201ENST00000313863 CHGAP10645 457 aaKnown RBP17.59■□□□□ 0.41
MKS1-201ENST00000313863 TNNT2P45379 298 aaPredicted RBP17.59■□□□□ 0.41
MKS1-201ENST00000313863 ARHGEF28Q8N1W1 1705 aaKnown RBP17.59■□□□□ 0.41
MKS1-201ENST00000313863 GLI2P10070 1586 aa17.59■□□□□ 0.41
MKS1-201ENST00000313863 RLBP1P12271 317 aa17.59■□□□□ 0.41
MKS1-201ENST00000313863 FTSJ3Q8IY81 847 aaKnown RBP17.59■□□□□ 0.41
MKS1-201ENST00000313863 ASXL2Q76L83 1435 aa17.58■□□□□ 0.41
MKS1-201ENST00000313863 ANTXR1Q9H6X2 564 aa17.58■□□□□ 0.4
MKS1-201ENST00000313863 CFAP65Q6ZU64 1925 aaKnown RBP17.58■□□□□ 0.4
MKS1-201ENST00000313863 HECW2Q9P2P5 1572 aa17.57■□□□□ 0.4
MKS1-201ENST00000313863 DZIP1LQ8IYY4 767 aaKnown RBP17.57■□□□□ 0.4
MKS1-201ENST00000313863 NPATQ14207 1427 aa17.57■□□□□ 0.4
MKS1-201ENST00000313863 MLH3Q9UHC1 1453 aa17.57■□□□□ 0.4
MKS1-201ENST00000313863 SLKQ9H2G2 1235 aaPredicted RBP17.57■□□□□ 0.4
MKS1-201ENST00000313863 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
MKS1-201ENST00000313863 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
MKS1-201ENST00000313863 UBE2Q2Q8WVN8 375 aa17.56■□□□□ 0.4
MKS1-201ENST00000313863 ABCC11Q96J66 1382 aa17.55■□□□□ 0.4
MKS1-201ENST00000313863 TBC1D2Q9BYX2 928 aa17.55■□□□□ 0.4
MKS1-201ENST00000313863 ANKRD26Q9UPS8 1709 aa17.55■□□□□ 0.4
MKS1-201ENST00000313863 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
MKS1-201ENST00000313863 HDAC1Q13547 482 aaPredicted RBP17.54■□□□□ 0.4
MKS1-201ENST00000313863 DDX19BQ9UMR2 479 aa17.54■□□□□ 0.4
MKS1-201ENST00000313863 TULP4Q9NRJ4 1543 aa17.54■□□□□ 0.4
MKS1-201ENST00000313863 IL16Q14005 1332 aa17.54■□□□□ 0.4
MKS1-201ENST00000313863 FRMPD1Q5SYB0 1578 aa17.53■□□□□ 0.4
MKS1-201ENST00000313863 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
MKS1-201ENST00000313863 POGKQ9P215 609 aa17.53■□□□□ 0.4
MKS1-201ENST00000313863 POGZQ7Z3K3 1410 aa17.53■□□□□ 0.4
MKS1-201ENST00000313863 VGFO15240 615 aaPredicted RBP17.52■□□□□ 0.4
MKS1-201ENST00000313863 PIK3C2BO00750 1634 aa17.52■□□□□ 0.4
MKS1-201ENST00000313863 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.39
MKS1-201ENST00000313863 ABCC3O15438 1527 aa17.51■□□□□ 0.39
MKS1-201ENST00000313863 SMC4Q9NTJ3 1288 aa17.51■□□□□ 0.39
MKS1-201ENST00000313863 RSPH6AQ9H0K4 717 aa17.51■□□□□ 0.39
MKS1-201ENST00000313863 TNNQ9UQP3 1299 aa17.51■□□□□ 0.39
MKS1-201ENST00000313863 C22orf23Q9BZE7 217 aa17.5■□□□□ 0.39
MKS1-201ENST00000313863 CHMP5Q9NZZ3 219 aa17.5■□□□□ 0.39
MKS1-201ENST00000313863 MED14O60244 1454 aa17.5■□□□□ 0.39
MKS1-201ENST00000313863 TMEM132EQ6IEE7 984 aa17.49■□□□□ 0.39
MKS1-201ENST00000313863 IPO8O15397 1037 aaKnown RBP17.49■□□□□ 0.39
MKS1-201ENST00000313863 NEXMIFQ5QGS0 1516 aa17.49■□□□□ 0.39
MKS1-201ENST00000313863 KIF16BQ96L93 1317 aa17.48■□□□□ 0.39
MKS1-201ENST00000313863 ATF7IPQ6VMQ6 1270 aa17.48■□□□□ 0.39
MKS1-201ENST00000313863 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
MKS1-201ENST00000313863 MCM4P33991 863 aa17.47■□□□□ 0.39
MKS1-201ENST00000313863 TMPOP42166 694 aaKnown RBP17.47■□□□□ 0.39
MKS1-201ENST00000313863 COL3A1P02461 1466 aaPredicted RBP17.46■□□□□ 0.39
MKS1-201ENST00000313863 EXOSC9Q06265 439 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms