RNA–Protein interactions for RNA: ENST00000313566.10

AP4S1-202, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 3 BASIC

Gene AP4S1, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-202ENST00000313566 NBPF1Q3BBV0 1214 aa24.66■■□□□ 1.54
AP4S1-202ENST00000313566 CCER1Q8TC90 406 aaPredicted RBP24.66■■□□□ 1.54
AP4S1-202ENST00000313566 PLEKHH1Q9ULM0 1364 aa24.66■■□□□ 1.54
AP4S1-202ENST00000313566 MST1RQ04912 1400 aa24.65■■□□□ 1.54
AP4S1-202ENST00000313566 CDC42BPGQ6DT37 1551 aa24.65■■□□□ 1.54
AP4S1-202ENST00000313566 ROBO1Q9Y6N7 1651 aa24.65■■□□□ 1.54
AP4S1-202ENST00000313566 HSPA1LP34931 641 aa24.64■■□□□ 1.54
AP4S1-202ENST00000313566 TRPM1Q7Z4N2 1603 aa24.64■■□□□ 1.53
AP4S1-202ENST00000313566 NBPF8Q3BBV2 869 aa24.61■■□□□ 1.53
AP4S1-202ENST00000313566 ARHGEF28Q8N1W1 1705 aaKnown RBP24.6■■□□□ 1.53
AP4S1-202ENST00000313566 C1orf167Q5SNV9 1468 aa24.59■■□□□ 1.53
AP4S1-202ENST00000313566 ROCK2O75116 1388 aaKnown RBP24.59■■□□□ 1.53
AP4S1-202ENST00000313566 BRINP3Q76B58 766 aa24.59■■□□□ 1.53
AP4S1-202ENST00000313566 SAFB2Q14151 953 aaKnown RBP eCLIP24.58■■□□□ 1.53
AP4S1-202ENST00000313566 GPRASP1Q5JY77 1395 aa24.57■■□□□ 1.52
AP4S1-202ENST00000313566 ADGRB2O60241 1585 aa24.56■■□□□ 1.52
AP4S1-202ENST00000313566 FMN2Q9NZ56 1722 aa24.54■■□□□ 1.52
AP4S1-202ENST00000313566 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
AP4S1-202ENST00000313566 RALGAPBQ86X10 1494 aa24.53■■□□□ 1.52
AP4S1-202ENST00000313566 AHDC1Q5TGY3 1603 aaPredicted RBP24.53■■□□□ 1.52
AP4S1-202ENST00000313566 MINK1Q8N4C8 1332 aaPredicted RBP24.52■■□□□ 1.52
AP4S1-202ENST00000313566 CENPJQ9HC77 1338 aaPredicted RBP24.52■■□□□ 1.52
AP4S1-202ENST00000313566 PHLPP1O60346 1717 aa24.5■■□□□ 1.51
AP4S1-202ENST00000313566 WASLO00401 505 aaPredicted RBP24.5■■□□□ 1.51
AP4S1-202ENST00000313566 ORAI2Q96SN7 254 aa24.5■■□□□ 1.51
AP4S1-202ENST00000313566 ESCO1Q5FWF5 840 aa24.49■■□□□ 1.51
AP4S1-202ENST00000313566 CARD11Q9BXL7 1154 aa24.49■■□□□ 1.51
AP4S1-202ENST00000313566 ANKARQ7Z5J8 1434 aa24.49■■□□□ 1.51
AP4S1-202ENST00000313566 HIRIP3Q9BW71 556 aaPredicted RBP24.48■■□□□ 1.51
AP4S1-202ENST00000313566 NHSL1Q5SYE7 1610 aa24.47■■□□□ 1.51
AP4S1-202ENST00000313566 NUTM2FA1L443 756 aa24.45■■□□□ 1.5
AP4S1-202ENST00000313566 COL16A1Q07092 1604 aaPredicted RBP24.45■■□□□ 1.5
AP4S1-202ENST00000313566 NPHP3Q7Z494 1330 aa24.44■■□□□ 1.5
AP4S1-202ENST00000313566 LRRC59Q96AG4 307 aaKnown RBP24.43■■□□□ 1.5
AP4S1-202ENST00000313566 TULP4Q9NRJ4 1543 aa24.43■■□□□ 1.5
AP4S1-202ENST00000313566 JCADQ9P266 1359 aa24.42■■□□□ 1.5
AP4S1-202ENST00000313566 RGPD8O14715 1765 aaPredicted RBP24.42■■□□□ 1.5
AP4S1-202ENST00000313566 CDK19Q9BWU1 502 aa24.42■■□□□ 1.5
AP4S1-202ENST00000313566 KIF1AQ12756 1690 aa24.42■■□□□ 1.5
AP4S1-202ENST00000313566 QRICH2Q9H0J4 1663 aa24.42■■□□□ 1.5
AP4S1-202ENST00000313566 SOS2Q07890 1332 aaPredicted RBP24.41■■□□□ 1.5
AP4S1-202ENST00000313566 PHF8Q9UPP1 1060 aa24.41■■□□□ 1.5
AP4S1-202ENST00000313566 SBNO2Q9Y2G9 1366 aa24.4■■□□□ 1.5
AP4S1-202ENST00000313566 FOXO3O43524 673 aa24.39■■□□□ 1.49
AP4S1-202ENST00000313566 USP32Q8NFA0 1604 aa24.39■■□□□ 1.49
AP4S1-202ENST00000313566 SLC24A1O60721 1099 aa24.38■■□□□ 1.49
AP4S1-202ENST00000313566 EVC2Q86UK5 1308 aa24.37■■□□□ 1.49
AP4S1-202ENST00000313566 NUDT16Q96DE0 195 aaKnown RBP24.37■■□□□ 1.49
AP4S1-202ENST00000313566 PRR36Q9H6K5 1346 aa24.36■■□□□ 1.49
AP4S1-202ENST00000313566 DDX17Q92841 729 aaKnown RBP24.36■■□□□ 1.49
AP4S1-202ENST00000313566 CCDC61Q9Y6R9 512 aa24.36■■□□□ 1.49
AP4S1-202ENST00000313566 ITSN1Q15811 1721 aa24.35■■□□□ 1.49
AP4S1-202ENST00000313566 SPATA31A6Q5VVP1 1343 aa24.35■■□□□ 1.49
AP4S1-202ENST00000313566 SRPK2P78362 688 aaKnown RBP24.34■■□□□ 1.49
AP4S1-202ENST00000313566 PSME1Q06323 249 aa24.34■■□□□ 1.49
AP4S1-202ENST00000313566 SHPRHQ149N8 1683 aa24.34■■□□□ 1.49
AP4S1-202ENST00000313566 ATP7BP35670 1465 aa24.33■■□□□ 1.49
AP4S1-202ENST00000313566 PXDNQ92626 1479 aa24.32■■□□□ 1.48
AP4S1-202ENST00000313566 KRT28Q7Z3Y7 464 aa24.31■■□□□ 1.48
AP4S1-202ENST00000313566 PLEKHG3A1L390 1219 aa24.3■■□□□ 1.48
AP4S1-202ENST00000313566 PMFBP1Q8TBY8 1022 aa24.3■■□□□ 1.48
AP4S1-202ENST00000313566 NGDNQ8NEJ9 315 aaKnown RBP24.28■■□□□ 1.48
AP4S1-202ENST00000313566 PUS7Q96PZ0 661 aaKnown RBP24.28■■□□□ 1.48
AP4S1-202ENST00000313566 CABP2Q9NPB3 220 aa24.28■■□□□ 1.48
AP4S1-202ENST00000313566 PNPLA6Q8IY17 1366 aa24.28■■□□□ 1.48
AP4S1-202ENST00000313566 ST20-MTHFSA0A0A6YYL1 179 aa24.27■■□□□ 1.48
AP4S1-202ENST00000313566 MED1Q15648 1581 aaPredicted RBP24.27■■□□□ 1.48
AP4S1-202ENST00000313566 TOPAZ1Q8N9V7 1692 aa24.27■■□□□ 1.48
AP4S1-202ENST00000313566 SBNO1A3KN83 1393 aa24.27■■□□□ 1.48
AP4S1-202ENST00000313566 USP47Q96K76 1375 aa24.27■■□□□ 1.48
AP4S1-202ENST00000313566 XPCQ01831 940 aaPredicted RBP24.26■■□□□ 1.47
AP4S1-202ENST00000313566 SPATA31A3Q5VYP0 1347 aa24.26■■□□□ 1.47
AP4S1-202ENST00000313566 POLR3AO14802 1390 aaPredicted RBP24.26■■□□□ 1.47
AP4S1-202ENST00000313566 ATAD2Q6PL18 1390 aa24.25■■□□□ 1.47
AP4S1-202ENST00000313566 TESK2Q96S53 571 aa24.24■■□□□ 1.47
AP4S1-202ENST00000313566 PPIP5K1Q6PFW1 1433 aa24.22■■□□□ 1.47
AP4S1-202ENST00000313566 ACEP12821 1306 aa24.21■■□□□ 1.47
AP4S1-202ENST00000313566 COL22A1Q8NFW1 1626 aaPredicted RBP24.21■■□□□ 1.47
AP4S1-202ENST00000313566 TNS3Q68CZ2 1445 aa24.2■■□□□ 1.46
AP4S1-202ENST00000313566 ARHGEF10O15013 1369 aa24.2■■□□□ 1.46
AP4S1-202ENST00000313566 BRD4O60885 1362 aaPredicted RBP24.2■■□□□ 1.46
AP4S1-202ENST00000313566 DISP3Q9P2K9 1392 aa24.2■■□□□ 1.46
AP4S1-202ENST00000313566 CABP1Q9NZU7 370 aa24.2■■□□□ 1.46
AP4S1-202ENST00000313566 TMF1P82094 1093 aa24.17■■□□□ 1.46
AP4S1-202ENST00000313566 ZNF692Q9BU19 519 aaPredicted RBP24.17■■□□□ 1.46
AP4S1-202ENST00000313566 TRPM3Q9HCF6 1732 aaPredicted RBP24.17■■□□□ 1.46
AP4S1-202ENST00000313566 NUTM2BA6NNL0 878 aaPredicted RBP24.16■■□□□ 1.46
AP4S1-202ENST00000313566 NUTM2EB1AL46 878 aaPredicted RBP24.16■■□□□ 1.46
AP4S1-202ENST00000313566 EIF4G2P78344 907 aaKnown RBP eCLIP24.16■■□□□ 1.46
AP4S1-202ENST00000313566 CDCA8Q53HL2 280 aa24.16■■□□□ 1.46
AP4S1-202ENST00000313566 NUTM2AQ8IVF1 878 aaPredicted RBP24.16■■□□□ 1.46
AP4S1-202ENST00000313566 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
AP4S1-202ENST00000313566 LRP6O75581 1613 aa24.14■■□□□ 1.46
AP4S1-202ENST00000313566 MEX3CQ5U5Q3 659 aaKnown RBP24.14■■□□□ 1.45
AP4S1-202ENST00000313566 NINLQ9Y2I6 1382 aa24.13■■□□□ 1.45
AP4S1-202ENST00000313566 ALS2Q96Q42 1657 aa24.12■■□□□ 1.45
AP4S1-202ENST00000313566 PAK3O75914 559 aaPredicted RBP24.12■■□□□ 1.45
AP4S1-202ENST00000313566 LMOD2Q6P5Q4 547 aa24.12■■□□□ 1.45
AP4S1-202ENST00000313566 USP6P35125 1406 aa24.1■■□□□ 1.45
AP4S1-202ENST00000313566 CPSF1Q10570 1443 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms