RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 RAB3GAP1Q15042 981 aa20.24■□□□□ 0.83
SOX30-202ENST00000311371 HS1BP3Q53T59 392 aa20.24■□□□□ 0.83
SOX30-202ENST00000311371 GPATCH8Q9UKJ3 1502 aaKnown RBP20.24■□□□□ 0.83
SOX30-202ENST00000311371 RTEL1-TNFRSF6BF6WH68 1400 aa20.23■□□□□ 0.83
SOX30-202ENST00000311371 ZKSCAN5Q9Y2L8 839 aa20.23■□□□□ 0.83
SOX30-202ENST00000311371 WDR7Q9Y4E6 1490 aa20.23■□□□□ 0.83
SOX30-202ENST00000311371 PMFBP1Q8TBY8 1022 aa20.23■□□□□ 0.83
SOX30-202ENST00000311371 LETM1O95202 739 aaPredicted RBP20.22■□□□□ 0.83
SOX30-202ENST00000311371 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
SOX30-202ENST00000311371 ZNF830Q96NB3 372 aaPredicted RBP20.22■□□□□ 0.83
SOX30-202ENST00000311371 IGSF3O75054 1194 aa20.21■□□□□ 0.83
SOX30-202ENST00000311371 NKTRP30414 1462 aaKnown RBP20.21■□□□□ 0.83
SOX30-202ENST00000311371 ZBTB22O15209 634 aa20.21■□□□□ 0.83
SOX30-202ENST00000311371 PTMSP20962 102 aa20.21■□□□□ 0.83
SOX30-202ENST00000311371 PAXIP1Q6ZW49 1069 aaPredicted RBP20.21■□□□□ 0.83
SOX30-202ENST00000311371 CDC42BPBQ9Y5S2 1711 aa20.21■□□□□ 0.83
SOX30-202ENST00000311371 PZPP20742 1482 aa20.2■□□□□ 0.82
SOX30-202ENST00000311371 ZNF644Q9H582 1327 aaPredicted RBP20.2■□□□□ 0.82
SOX30-202ENST00000311371 GOLGA6L22H0YM25 854 aa20.19■□□□□ 0.82
SOX30-202ENST00000311371 ATP2B3Q16720 1220 aa20.19■□□□□ 0.82
SOX30-202ENST00000311371 DNTTIP2Q5QJE6 756 aaKnown RBP20.19■□□□□ 0.82
SOX30-202ENST00000311371 TRMT2AQ8IZ69 625 aaKnown RBP20.19■□□□□ 0.82
SOX30-202ENST00000311371 RBSNQ9H1K0 784 aa20.19■□□□□ 0.82
SOX30-202ENST00000311371 SSFA2P28290 1259 aa20.18■□□□□ 0.82
SOX30-202ENST00000311371 MYO5CQ9NQX4 1742 aa20.18■□□□□ 0.82
SOX30-202ENST00000311371 KIAA1107Q9UPP5 1409 aa20.18■□□□□ 0.82
SOX30-202ENST00000311371 SMC5Q8IY18 1101 aa20.18■□□□□ 0.82
SOX30-202ENST00000311371 UHRF1BP1Q6BDS2 1440 aa20.18■□□□□ 0.82
SOX30-202ENST00000311371 NCOA3Q9Y6Q9 1424 aa20.18■□□□□ 0.82
SOX30-202ENST00000311371 FAM177BA6PVY3 158 aa20.18■□□□□ 0.82
SOX30-202ENST00000311371 CFDP1Q9UEE9 299 aaPredicted RBP20.18■□□□□ 0.82
SOX30-202ENST00000311371 CIZ1Q9ULV3 898 aaPredicted RBP20.18■□□□□ 0.82
SOX30-202ENST00000311371 SPDYE4A6NLX3 237 aa20.17■□□□□ 0.82
SOX30-202ENST00000311371 APAF1O14727 1248 aa20.17■□□□□ 0.82
SOX30-202ENST00000311371 CAVIN1Q6NZI2 390 aaKnown RBP20.17■□□□□ 0.82
SOX30-202ENST00000311371 CGNQ9P2M7 1197 aaKnown RBP20.17■□□□□ 0.82
SOX30-202ENST00000311371 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
SOX30-202ENST00000311371 ZNF777Q9ULD5 760 aaPredicted RBP20.17■□□□□ 0.82
SOX30-202ENST00000311371 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
SOX30-202ENST00000311371 DAPK1P53355 1430 aa20.16■□□□□ 0.82
SOX30-202ENST00000311371 KLHL40Q2TBA0 621 aa20.16■□□□□ 0.82
SOX30-202ENST00000311371 ZNF710Q8N1W2 664 aa20.16■□□□□ 0.82
SOX30-202ENST00000311371 MAPK8IP2Q13387 824 aaPredicted RBP20.16■□□□□ 0.82
SOX30-202ENST00000311371 TNNQ9UQP3 1299 aa20.16■□□□□ 0.82
SOX30-202ENST00000311371 PDLIM2Q96JY6 352 aa20.15■□□□□ 0.82
SOX30-202ENST00000311371 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
SOX30-202ENST00000311371 PPP2R1AP30153 589 aa20.14■□□□□ 0.81
SOX30-202ENST00000311371 RWDD1Q9H446 243 aaPredicted RBP20.14■□□□□ 0.81
SOX30-202ENST00000311371 MYRIPQ8NFW9 859 aa20.13■□□□□ 0.81
SOX30-202ENST00000311371 E9PSI1 815 aa20.13■□□□□ 0.81
SOX30-202ENST00000311371 CDK11BP21127 795 aaKnown RBP20.13■□□□□ 0.81
SOX30-202ENST00000311371 ZSCAN23Q3MJ62 389 aa20.13■□□□□ 0.81
SOX30-202ENST00000311371 CAMSAP2Q08AD1 1489 aa20.13■□□□□ 0.81
SOX30-202ENST00000311371 PRIM1P49642 420 aaKnown RBP20.12■□□□□ 0.81
SOX30-202ENST00000311371 RLBP1P12271 317 aa20.11■□□□□ 0.81
SOX30-202ENST00000311371 ZNF445P59923 1031 aa20.11■□□□□ 0.81
SOX30-202ENST00000311371 ABCC5O15440 1437 aa20.11■□□□□ 0.81
SOX30-202ENST00000311371 ABCA9Q8IUA7 1624 aa20.11■□□□□ 0.81
SOX30-202ENST00000311371 MCM5P33992 734 aa20.11■□□□□ 0.81
SOX30-202ENST00000311371 CCDC39Q9UFE4 941 aa20.11■□□□□ 0.81
SOX30-202ENST00000311371 IBTKQ9P2D0 1353 aaPredicted RBP20.11■□□□□ 0.81
SOX30-202ENST00000311371 SNX21Q969T3 373 aa20.11■□□□□ 0.81
SOX30-202ENST00000311371 ZMYM3Q14202 1370 aa20.11■□□□□ 0.81
SOX30-202ENST00000311371 ARHGAP5Q13017 1502 aa20.1■□□□□ 0.81
SOX30-202ENST00000311371 BAG4O95429 457 aaKnown RBP20.1■□□□□ 0.81
SOX30-202ENST00000311371 MCTP1Q6DN14 999 aa20.1■□□□□ 0.81
SOX30-202ENST00000311371 DISP3Q9P2K9 1392 aa20.1■□□□□ 0.81
SOX30-202ENST00000311371 PTMAP06454 111 aaKnown RBP20.09■□□□□ 0.81
SOX30-202ENST00000311371 BCL2L13Q9BXK5 485 aa20.09■□□□□ 0.81
SOX30-202ENST00000311371 CD2BP2O95400 341 aaKnown RBP20.09■□□□□ 0.81
SOX30-202ENST00000311371 SAMD9LQ8IVG5 1584 aa20.09■□□□□ 0.81
SOX30-202ENST00000311371 NBPF1Q3BBV0 1214 aa20.08■□□□□ 0.8
SOX30-202ENST00000311371 ZNF771Q7L3S4 317 aaPredicted RBP20.07■□□□□ 0.8
SOX30-202ENST00000311371 KIAA2012Q0VF49 1180 aa20.07■□□□□ 0.8
SOX30-202ENST00000311371 MPNDQ8N594 471 aa20.07■□□□□ 0.8
SOX30-202ENST00000311371 DNMT1P26358 1616 aaKnown RBP20.06■□□□□ 0.8
SOX30-202ENST00000311371 RBM27Q9P2N5 1060 aaKnown RBP20.06■□□□□ 0.8
SOX30-202ENST00000311371 PLCH2O75038 1416 aa20.06■□□□□ 0.8
SOX30-202ENST00000311371 NINLQ9Y2I6 1382 aa20.05■□□□□ 0.8
SOX30-202ENST00000311371 TAF3Q5VWG9 929 aa20.05■□□□□ 0.8
SOX30-202ENST00000311371 SCAPERQ9BY12 1400 aa20.04■□□□□ 0.8
SOX30-202ENST00000311371 RNF214Q8ND24 703 aa20.04■□□□□ 0.8
SOX30-202ENST00000311371 RBM25P49756 843 aaKnown RBP20.04■□□□□ 0.8
SOX30-202ENST00000311371 GAS2L2Q8NHY3 880 aa20.04■□□□□ 0.8
SOX30-202ENST00000311371 KNSTRNQ9Y448 316 aa20.04■□□□□ 0.8
SOX30-202ENST00000311371 ANKRD30AQ9BXX3 1397 aa20.03■□□□□ 0.8
SOX30-202ENST00000311371 DNAJC5Q9H3Z4 198 aa20.03■□□□□ 0.8
SOX30-202ENST00000311371 HNRNPMP52272 730 aaKnown RBP eCLIP20.02■□□□□ 0.8
SOX30-202ENST00000311371 RBM42Q9BTD8 480 aaKnown RBP20.02■□□□□ 0.8
SOX30-202ENST00000311371 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.02■□□□□ 0.8
SOX30-202ENST00000311371 K7ELQ4 463 aaPredicted RBP20.02■□□□□ 0.79
SOX30-202ENST00000311371 PDCL2Q8N4E4 241 aa20.02■□□□□ 0.79
SOX30-202ENST00000311371 U2AF2P26368 475 aaKnown RBP eCLIP20.01■□□□□ 0.79
SOX30-202ENST00000311371 KIF3AQ9Y496 699 aa20.01■□□□□ 0.79
SOX30-202ENST00000311371 SYCP2Q9BX26 1530 aa20.01■□□□□ 0.79
SOX30-202ENST00000311371 CROCC2H7BZ55 1655 aa20.01■□□□□ 0.79
SOX30-202ENST00000311371 PRIMPOLQ96LW4 560 aa20■□□□□ 0.79
SOX30-202ENST00000311371 RARSP54136 660 aaKnown RBP19.99■□□□□ 0.79
SOX30-202ENST00000311371 BCL2L12Q9HB09 334 aa19.99■□□□□ 0.79
SOX30-202ENST00000311371 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms