RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 GGNBP2Q9H3C7 697 aa15.05■□□□□ 0
PTPN2-201ENST00000309660 KIAA1210Q9ULL0 1709 aa15.05■□□□□ 0
PTPN2-201ENST00000309660 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
PTPN2-201ENST00000309660 CFAP74Q9C0B2 1584 aa15.05■□□□□ -0
PTPN2-201ENST00000309660 E9PSI1 815 aa15.05■□□□□ -0
PTPN2-201ENST00000309660 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ -0
PTPN2-201ENST00000309660 PRAM1Q96QH2 718 aa15.05■□□□□ -0
PTPN2-201ENST00000309660 SBNO2Q9Y2G9 1366 aa15.04■□□□□ -0
PTPN2-201ENST00000309660 NRXN1Q9ULB1 1477 aa15.04■□□□□ -0
PTPN2-201ENST00000309660 RGS3P49796 1198 aa15.04■□□□□ -0
PTPN2-201ENST00000309660 TCP11L2Q8N4U5 519 aa15.04■□□□□ -0
PTPN2-201ENST00000309660 BCL2L13Q9BXK5 485 aa15.04■□□□□ -0
PTPN2-201ENST00000309660 NEO1Q92859 1461 aa15.04■□□□□ -0
PTPN2-201ENST00000309660 SLC52A1Q9NWF4 448 aa15.04■□□□□ -0
PTPN2-201ENST00000309660 WWC1Q8IX03 1113 aa15.03■□□□□ -0
PTPN2-201ENST00000309660 IPO9Q96P70 1041 aaKnown RBP15.03■□□□□ -0
PTPN2-201ENST00000309660 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
PTPN2-201ENST00000309660 NEURL4Q96JN8 1562 aa15.01□□□□□ -0.01
PTPN2-201ENST00000309660 RUNDC1Q96C34 613 aa15.01□□□□□ -0.01
PTPN2-201ENST00000309660 IFT172Q9UG01 1749 aa15□□□□□ -0.01
PTPN2-201ENST00000309660 ADGRB1O14514 1584 aa15□□□□□ -0.01
PTPN2-201ENST00000309660 DIP2CQ9Y2E4 1556 aa15□□□□□ -0.01
PTPN2-201ENST00000309660 POLR3AO14802 1390 aaPredicted RBP14.99□□□□□ -0.01
PTPN2-201ENST00000309660 NKTRP30414 1462 aaKnown RBP14.99□□□□□ -0.01
PTPN2-201ENST00000309660 PANK1Q8TE04 598 aa14.99□□□□□ -0.01
PTPN2-201ENST00000309660 COG6Q9Y2V7 657 aa14.99□□□□□ -0.01
PTPN2-201ENST00000309660 CAMSAP1Q5T5Y3 1602 aa14.99□□□□□ -0.01
PTPN2-201ENST00000309660 QRICH2Q9H0J4 1663 aa14.99□□□□□ -0.01
PTPN2-201ENST00000309660 BACH2Q9BYV9 841 aa14.98□□□□□ -0.01
PTPN2-201ENST00000309660 PPLO60437 1756 aa14.98□□□□□ -0.01
PTPN2-201ENST00000309660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.011e-6■□□□□ 10.9
PTPN2-201ENST00000309660 CLUAP1Q96AJ1 413 aa14.98□□□□□ -0.01
PTPN2-201ENST00000309660 SIGLEC1Q9BZZ2 1709 aa14.98□□□□□ -0.01
PTPN2-201ENST00000309660 SETBP1Q9Y6X0 1596 aa14.97□□□□□ -0.01
PTPN2-201ENST00000309660 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
PTPN2-201ENST00000309660 CENPQQ7L2Z9 268 aaPredicted RBP14.97□□□□□ -0.01
PTPN2-201ENST00000309660 ESF1Q9H501 851 aaKnown RBP14.97□□□□□ -0.01
PTPN2-201ENST00000309660 GLI2P10070 1586 aa14.97□□□□□ -0.01
PTPN2-201ENST00000309660 WAPLQ7Z5K2 1190 aa14.96□□□□□ -0.01
PTPN2-201ENST00000309660 TRMT2AQ8IZ69 625 aaKnown RBP14.96□□□□□ -0.01
PTPN2-201ENST00000309660 ANKRD36BQ8N2N9 1353 aa14.96□□□□□ -0.01
PTPN2-201ENST00000309660 FBLN1P23142 703 aa14.96□□□□□ -0.02
PTPN2-201ENST00000309660 TERF2IPQ9NYB0 399 aa14.96□□□□□ -0.02
PTPN2-201ENST00000309660 A0A1W2PP64 1363 aa14.95□□□□□ -0.02
PTPN2-201ENST00000309660 MS4A1P11836 297 aa14.95□□□□□ -0.02
PTPN2-201ENST00000309660 CABP1Q9NZU7 370 aa14.95□□□□□ -0.02
PTPN2-201ENST00000309660 CDK19Q9BWU1 502 aa14.94□□□□□ -0.02
PTPN2-201ENST00000309660 NEXMIFQ5QGS0 1516 aa14.94□□□□□ -0.02
PTPN2-201ENST00000309660 LAS1LQ9Y4W2 734 aaKnown RBP14.94□□□□□ -0.02
PTPN2-201ENST00000309660 TULP4Q9NRJ4 1543 aa14.93□□□□□ -0.02
PTPN2-201ENST00000309660 HDGFL2Q7Z4V5 671 aaPredicted RBP14.93□□□□□ -0.02
PTPN2-201ENST00000309660 TSR2Q969E8 191 aaKnown RBP14.93□□□□□ -0.02
PTPN2-201ENST00000309660 TNNQ9UQP3 1299 aa14.93□□□□□ -0.02
PTPN2-201ENST00000309660 TSPOAP1O95153 1857 aa14.92□□□□□ -0.02
PTPN2-201ENST00000309660 MAPK8IP3Q9UPT6 1336 aa14.92□□□□□ -0.02
PTPN2-201ENST00000309660 MYO3AQ8NEV4 1616 aa14.92□□□□□ -0.02
PTPN2-201ENST00000309660 KDM2BQ8NHM5 1336 aa14.92□□□□□ -0.02
PTPN2-201ENST00000309660 NGEFQ8N5V2 710 aa14.92□□□□□ -0.02
PTPN2-201ENST00000309660 FYB1O15117 783 aa14.91□□□□□ -0.02
PTPN2-201ENST00000309660 ARHGAP31Q2M1Z3 1444 aa14.91□□□□□ -0.02
PTPN2-201ENST00000309660 YTHDC2Q9H6S0 1430 aaKnown RBP14.9□□□□□ -0.02
PTPN2-201ENST00000309660 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
PTPN2-201ENST00000309660 IGHDP01880 384 aa14.9□□□□□ -0.02
PTPN2-201ENST00000309660 RICTORQ6R327 1708 aa14.89□□□□□ -0.03
PTPN2-201ENST00000309660 SLC4A3P48751 1232 aa14.89□□□□□ -0.03
PTPN2-201ENST00000309660 RARSP54136 660 aaKnown RBP14.89□□□□□ -0.03
PTPN2-201ENST00000309660 RTL5Q5HYW3 569 aaPredicted RBP14.89□□□□□ -0.03
PTPN2-201ENST00000309660 MYH16Q9H6N6 1097 aa14.88□□□□□ -0.03
PTPN2-201ENST00000309660 TXNDC2Q86VQ3 553 aa14.88□□□□□ -0.03
PTPN2-201ENST00000309660 DAXXQ9UER7 740 aaPredicted RBP14.88□□□□□ -0.03
PTPN2-201ENST00000309660 ATAD2Q6PL18 1390 aa14.88□□□□□ -0.03
PTPN2-201ENST00000309660 NUTM2FA1L443 756 aa14.87□□□□□ -0.03
PTPN2-201ENST00000309660 RLBP1P12271 317 aa14.87□□□□□ -0.03
PTPN2-201ENST00000309660 WDR63Q8IWG1 891 aa14.87□□□□□ -0.03
PTPN2-201ENST00000309660 ARHGEF28Q8N1W1 1705 aaKnown RBP14.86□□□□□ -0.03
PTPN2-201ENST00000309660 PDE3AQ14432 1141 aa14.86□□□□□ -0.03
PTPN2-201ENST00000309660 PUS7Q96PZ0 661 aaKnown RBP14.86□□□□□ -0.03
PTPN2-201ENST00000309660 MYO5BQ9ULV0 1848 aa14.86□□□□□ -0.03
PTPN2-201ENST00000309660 DIAPH1O60610 1272 aaKnown RBP14.86□□□□□ -0.03
PTPN2-201ENST00000309660 FTSJ3Q8IY81 847 aaKnown RBP14.86□□□□□ -0.03
PTPN2-201ENST00000309660 NSD2O96028 1365 aa14.85□□□□□ -0.03
PTPN2-201ENST00000309660 ABCC11Q96J66 1382 aa14.85□□□□□ -0.03
PTPN2-201ENST00000309660 RIPK4P57078 832 aa14.85□□□□□ -0.03
PTPN2-201ENST00000309660 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
PTPN2-201ENST00000309660 NCKAP5LQ9HCH0 1330 aa14.85□□□□□ -0.03
PTPN2-201ENST00000309660 HMOX1P09601 288 aa14.85□□□□□ -0.03
PTPN2-201ENST00000309660 TMPOP42166 694 aaKnown RBP14.85□□□□□ -0.03
PTPN2-201ENST00000309660 EXOSC9Q06265 439 aaKnown RBP14.85□□□□□ -0.03
PTPN2-201ENST00000309660 SMC4Q9NTJ3 1288 aa14.85□□□□□ -0.03
PTPN2-201ENST00000309660 ZC3H13Q5T200 1668 aaKnown RBP14.85□□□□□ -0.03
PTPN2-201ENST00000309660 NEFMP07197 916 aa14.84□□□□□ -0.03
PTPN2-201ENST00000309660 PREX1Q8TCU6 1659 aa14.83□□□□□ -0.03
PTPN2-201ENST00000309660 PTPRMP28827 1452 aa14.83□□□□□ -0.04
PTPN2-201ENST00000309660 ZFYVE9O95405 1425 aa14.83□□□□□ -0.04
PTPN2-201ENST00000309660 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
PTPN2-201ENST00000309660 TMEM131LA2VDJ0 1609 aa14.82□□□□□ -0.04
PTPN2-201ENST00000309660 RIMS2Q9UQ26 1411 aa14.82□□□□□ -0.04
PTPN2-201ENST00000309660 SHPRHQ149N8 1683 aa14.81□□□□□ -0.04
PTPN2-201ENST00000309660 DEKP35659 375 aaKnown RBP14.81□□□□□ -0.04
PTPN2-201ENST00000309660 SOX12O15370 315 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms