RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 RXRBP28702 533 aa18.3■□□□□ 0.52
TPT1-201ENST00000309246 ORAI2Q96SN7 254 aa18.28■□□□□ 0.52
TPT1-201ENST00000309246 CDK12Q9NYV4 1490 aaPredicted RBP18.27■□□□□ 0.52
TPT1-201ENST00000309246 CDC42BPGQ6DT37 1551 aa18.27■□□□□ 0.52
TPT1-201ENST00000309246 CCDC144AA2RUR9 1427 aa18.27■□□□□ 0.52
TPT1-201ENST00000309246 C8orf37Q96NL8 207 aa18.27■□□□□ 0.52
TPT1-201ENST00000309246 UPF1Q92900 1129 aaKnown RBP eCLIP18.26■□□□□ 0.51
TPT1-201ENST00000309246 KNDC1Q76NI1 1749 aa18.26■□□□□ 0.51
TPT1-201ENST00000309246 SOS2Q07890 1332 aaPredicted RBP18.24■□□□□ 0.51
TPT1-201ENST00000309246 ADGRF5Q8IZF2 1346 aa18.24■□□□□ 0.51
TPT1-201ENST00000309246 SPATA31E1Q6ZUB1 1445 aa18.24■□□□□ 0.51
TPT1-201ENST00000309246 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
TPT1-201ENST00000309246 ADAMTS2O95450 1211 aa18.23■□□□□ 0.51
TPT1-201ENST00000309246 RGL3Q3MIN7 710 aa18.23■□□□□ 0.51
TPT1-201ENST00000309246 RGS12O14924 1447 aa18.23■□□□□ 0.51
TPT1-201ENST00000309246 MARF1Q9Y4F3 1742 aaKnown RBP18.22■□□□□ 0.51
TPT1-201ENST00000309246 MPHOSPH9Q99550 1183 aa18.21■□□□□ 0.51
TPT1-201ENST00000309246 QTRT2Q9H974 415 aaKnown RBP18.21■□□□□ 0.51
TPT1-201ENST00000309246 ANKRD30BQ9BXX2 1392 aa18.2■□□□□ 0.5
TPT1-201ENST00000309246 NGLY1Q96IV0 654 aa18.2■□□□□ 0.5
TPT1-201ENST00000309246 STK26Q9P289 416 aa18.2■□□□□ 0.5
TPT1-201ENST00000309246 TECPR2O15040 1411 aa18.2■□□□□ 0.5
TPT1-201ENST00000309246 FMN2Q9NZ56 1722 aa18.2■□□□□ 0.5
TPT1-201ENST00000309246 RBM6P78332 1123 aaKnown RBP18.19■□□□□ 0.5
TPT1-201ENST00000309246 PXDNQ92626 1479 aa18.19■□□□□ 0.5
TPT1-201ENST00000309246 LRPPRCP42704 1394 aaKnown RBP18.18■□□□□ 0.5
TPT1-201ENST00000309246 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
TPT1-201ENST00000309246 ESCO1Q5FWF5 840 aa18.18■□□□□ 0.5
TPT1-201ENST00000309246 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
TPT1-201ENST00000309246 RGPD8O14715 1765 aaPredicted RBP18.17■□□□□ 0.5
TPT1-201ENST00000309246 TMEM132EQ6IEE7 984 aa18.17■□□□□ 0.5
TPT1-201ENST00000309246 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
TPT1-201ENST00000309246 MYOM2P54296 1465 aa18.16■□□□□ 0.5
TPT1-201ENST00000309246 NUTM2FA1L443 756 aa18.16■□□□□ 0.5
TPT1-201ENST00000309246 NPHP3Q7Z494 1330 aa18.16■□□□□ 0.5
TPT1-201ENST00000309246 XPCQ01831 940 aaPredicted RBP18.15■□□□□ 0.5
TPT1-201ENST00000309246 KIF1AQ12756 1690 aa18.15■□□□□ 0.5
TPT1-201ENST00000309246 ABCC11Q96J66 1382 aa18.15■□□□□ 0.5
TPT1-201ENST00000309246 USP21Q9UK80 565 aa18.14■□□□□ 0.49
TPT1-201ENST00000309246 YTHDC2Q9H6S0 1430 aaKnown RBP18.14■□□□□ 0.49
TPT1-201ENST00000309246 FOXO3O43524 673 aa18.13■□□□□ 0.49
TPT1-201ENST00000309246 TRPC5Q9UL62 973 aaPredicted RBP18.11■□□□□ 0.49
TPT1-201ENST00000309246 ATRNO75882 1429 aa18.11■□□□□ 0.49
TPT1-201ENST00000309246 NRXN1Q9ULB1 1477 aa18.1■□□□□ 0.49
TPT1-201ENST00000309246 FNBP4Q8N3X1 1017 aaPredicted RBP18.1■□□□□ 0.49
TPT1-201ENST00000309246 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.09■□□□□ 0.49
TPT1-201ENST00000309246 C14orf93Q9H972 538 aaKnown RBP18.07■□□□□ 0.48
TPT1-201ENST00000309246 BCL9LQ86UU0 1499 aa18.07■□□□□ 0.48
TPT1-201ENST00000309246 ATAD2Q6PL18 1390 aa18.06■□□□□ 0.48
TPT1-201ENST00000309246 USP32Q8NFA0 1604 aa18.06■□□□□ 0.48
TPT1-201ENST00000309246 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
TPT1-201ENST00000309246 ABCA3Q99758 1704 aa18.05■□□□□ 0.48
TPT1-201ENST00000309246 DHX57Q6P158 1386 aaKnown RBP18.04■□□□□ 0.48
TPT1-201ENST00000309246 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
TPT1-201ENST00000309246 SPATA31A3Q5VYP0 1347 aa18.04■□□□□ 0.48
TPT1-201ENST00000309246 ACIN1Q9UKV3 1341 aaKnown RBP18.04■□□□□ 0.48
TPT1-201ENST00000309246 DCAF8L1A6NGE4 600 aa18.04■□□□□ 0.48
TPT1-201ENST00000309246 SAFB2Q14151 953 aaKnown RBP eCLIP18.03■□□□□ 0.48
TPT1-201ENST00000309246 SIRT1Q96EB6 747 aa18.03■□□□□ 0.48
TPT1-201ENST00000309246 PLCH1Q4KWH8 1693 aa18.03■□□□□ 0.48
TPT1-201ENST00000309246 GLI3P10071 1580 aa18.02■□□□□ 0.48
TPT1-201ENST00000309246 KRT28Q7Z3Y7 464 aa18.02■□□□□ 0.48
TPT1-201ENST00000309246 DLC1Q96QB1 1528 aa18.02■□□□□ 0.47
TPT1-201ENST00000309246 TNS3Q68CZ2 1445 aa18.01■□□□□ 0.47
TPT1-201ENST00000309246 BRWD3Q6RI45 1802 aa18.01■□□□□ 0.47
TPT1-201ENST00000309246 PRAM1Q96QH2 718 aa18.01■□□□□ 0.47
TPT1-201ENST00000309246 ADGRB1O14514 1584 aa18■□□□□ 0.47
TPT1-201ENST00000309246 ADGRB2O60241 1585 aa18■□□□□ 0.47
TPT1-201ENST00000309246 SLIT2O94813 1529 aa18■□□□□ 0.47
TPT1-201ENST00000309246 PHF8Q9UPP1 1060 aa18■□□□□ 0.47
TPT1-201ENST00000309246 GJD4Q96KN9 370 aaPredicted RBP17.99■□□□□ 0.47
TPT1-201ENST00000309246 NWD2Q9ULI1 1742 aa17.98■□□□□ 0.47
TPT1-201ENST00000309246 PLEKHG5O94827 1062 aa17.98■□□□□ 0.47
TPT1-201ENST00000309246 RALGAPBQ86X10 1494 aa17.98■□□□□ 0.47
TPT1-201ENST00000309246 TRPM3Q9HCF6 1732 aaPredicted RBP17.97■□□□□ 0.47
TPT1-201ENST00000309246 HAP1P54257 671 aaPredicted RBP17.96■□□□□ 0.47
TPT1-201ENST00000309246 PSME1Q06323 249 aa17.96■□□□□ 0.47
TPT1-201ENST00000309246 UNC5CLQ8IV45 518 aa17.96■□□□□ 0.47
TPT1-201ENST00000309246 CABLES1Q8TDN4 633 aa17.96■□□□□ 0.47
TPT1-201ENST00000309246 POGKQ9P215 609 aa17.96■□□□□ 0.47
TPT1-201ENST00000309246 ANKARQ7Z5J8 1434 aa17.96■□□□□ 0.47
TPT1-201ENST00000309246 SBNO1A3KN83 1393 aa17.95■□□□□ 0.46
TPT1-201ENST00000309246 LMOD2Q6P5Q4 547 aa17.94■□□□□ 0.46
TPT1-201ENST00000309246 PMFBP1Q8TBY8 1022 aa17.94■□□□□ 0.46
TPT1-201ENST00000309246 TRAK1Q9UPV9 953 aa17.94■□□□□ 0.46
TPT1-201ENST00000309246 ARHGEF28Q8N1W1 1705 aaKnown RBP17.94■□□□□ 0.46
TPT1-201ENST00000309246 ALS2Q96Q42 1657 aa17.93■□□□□ 0.46
TPT1-201ENST00000309246 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
TPT1-201ENST00000309246 KDM2AQ9Y2K7 1162 aa17.93■□□□□ 0.46
TPT1-201ENST00000309246 ARHGEF10O15013 1369 aa17.92■□□□□ 0.46
TPT1-201ENST00000309246 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
TPT1-201ENST00000309246 TULP4Q9NRJ4 1543 aa17.92■□□□□ 0.46
TPT1-201ENST00000309246 NRAPQ86VF7 1730 aa17.92■□□□□ 0.46
TPT1-201ENST00000309246 DCAF11Q8TEB1 546 aa17.91■□□□□ 0.46
TPT1-201ENST00000309246 ITSN1Q15811 1721 aa17.9■□□□□ 0.46
TPT1-201ENST00000309246 CRYBG1Q9Y4K1 1723 aa17.9■□□□□ 0.46
TPT1-201ENST00000309246 PRR36Q9H6K5 1346 aa17.89■□□□□ 0.45
TPT1-201ENST00000309246 VPS72Q15906 364 aa17.88■□□□□ 0.45
TPT1-201ENST00000309246 CCDC125Q86Z20 511 aa17.88■□□□□ 0.45
TPT1-201ENST00000309246 EIF3AQ14152 1382 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms