RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 MAMSTRQ6ZN01 415 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 NAP1L5Q96NT1 182 aaPredicted RBP1.79□□□□□ -2.12
CEP290-201ENST00000309041 ZFATQ9P243 1243 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 TOP2BQ02880 1626 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 KCNJ4P48050 445 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 HINFPQ9BQA5 517 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 TBC1D2BQ9UPU7 963 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 RUSC2Q8N2Y8 1516 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 AK7Q96M32 723 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 PURBQ96QR8 312 aaKnown RBP1.79□□□□□ -2.12
CEP290-201ENST00000309041 PCLOQ9Y6V0 5065 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 PBX2P40425 430 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 RNF19BQ6ZMZ0 732 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 RASGRP2Q7LDG7 609 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 EPAS1Q99814 870 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 SMC2O95347 1197 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 PRKCSHP14314 528 aaPredicted RBP1.78□□□□□ -2.12
CEP290-201ENST00000309041 VCAM1P19320 739 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 TMEM259Q4ZIN3 620 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 C11orf88Q6PI97 169 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 BICDL2A1A5D9 508 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 TACC1O75410 805 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 SYT10Q6XYQ8 523 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 DDRGK1Q96HY6 314 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 RYR2Q92736 4967 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 PRAG1Q86YV5 1406 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 KRT83P78385 493 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 FKBP4Q02790 459 aaKnown RBP eCLIP1.78□□□□□ -2.12
CEP290-201ENST00000309041 SIRT1Q96EB6 747 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 TRAIPQ9BWF2 469 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 JADE2Q9NQC1 790 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 TBC1D12O60347 775 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 SPDYE1Q8NFV5 336 aaPredicted RBP1.78□□□□□ -2.12
CEP290-201ENST00000309041 L3MBTL3Q96JM7 780 aaPredicted RBP1.78□□□□□ -2.12
CEP290-201ENST00000309041 H0YC42 278 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 SLC4A5Q9BY07 1137 aa1.78□□□□□ -2.12
CEP290-201ENST00000309041 PUF60Q9UHX1 559 aaKnown RBP1.78□□□□□ -2.12
CEP290-201ENST00000309041 IGSF3O75054 1194 aa1.78□□□□□ -2.13
CEP290-201ENST00000309041 PHF14O94880 888 aa1.78□□□□□ -2.13
CEP290-201ENST00000309041 CADPS2Q86UW7 1296 aa1.78□□□□□ -2.13
CEP290-201ENST00000309041 GNL3Q9BVP2 549 aaKnown RBP eCLIP1.78□□□□□ -2.13
CEP290-201ENST00000309041 QTRT2Q9H974 415 aaKnown RBP1.78□□□□□ -2.13
CEP290-201ENST00000309041 FAM13BQ9NYF5 915 aa1.78□□□□□ -2.13
CEP290-201ENST00000309041 ZNF644Q9H582 1327 aaPredicted RBP1.77□□□□□ -2.13
CEP290-201ENST00000309041 APPP05067 770 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 PHLDB3Q6NSJ2 640 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 CUX2O14529 1486 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 TYW1Q9NV66 732 aaKnown RBP1.77□□□□□ -2.13
CEP290-201ENST00000309041 PCDH10Q9P2E7 1040 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 CPSF2Q9P2I0 782 aaKnown RBP1.77□□□□□ -2.13
CEP290-201ENST00000309041 PGAP2Q9UHJ9 254 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 KRT1P04264 644 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 PDE4AP27815 886 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 ALYREFQ86V81 257 aaKnown RBP1.77□□□□□ -2.13
CEP290-201ENST00000309041 C8orf37Q96NL8 207 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 SLC26A8Q96RN1 970 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 CSRNP1Q96S65 589 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 NAT1P18440 290 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 ARID5AQ03989 594 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 KCNA1Q09470 495 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 NCCRP1Q6ZVX7 275 aaPredicted RBP1.77□□□□□ -2.13
CEP290-201ENST00000309041 C16orf59Q7L2K0 433 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 TAB3Q8N5C8 712 aaPredicted RBP1.77□□□□□ -2.13
CEP290-201ENST00000309041 IPO4Q8TEX9 1081 aaKnown RBP1.77□□□□□ -2.13
CEP290-201ENST00000309041 SLKQ9H2G2 1235 aaPredicted RBP1.77□□□□□ -2.13
CEP290-201ENST00000309041 IRS4O14654 1257 aaPredicted RBP1.77□□□□□ -2.13
CEP290-201ENST00000309041 MAFGO15525 162 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 FNDC3BQ53EP0 1204 aaKnown RBP1.77□□□□□ -2.13
CEP290-201ENST00000309041 IFFO2Q5TF58 517 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 COL24A1Q17RW2 1714 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 LAMC1P11047 1609 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 ZNF252P-AS1Q0IIN9 211 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 DPH6Q7L8W6 267 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 JMYQ8N9B5 988 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 ARMC2Q8NEN0 867 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 BHMTQ93088 406 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 PARP3Q9Y6F1 533 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 SH3TC1Q8TE82 1336 aa1.77□□□□□ -2.13
CEP290-201ENST00000309041 ARHGEF11O15085 1522 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 ABCC9O60706 1549 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 RAPGEF1Q13905 1077 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 MPNDQ8N594 471 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 GMCL1Q96IK5 515 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 SELENOOQ9BVL4 669 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 ZNF700Q9H0M5 742 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 TRNAU1APQ9NX07 287 aaKnown RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 SLAIN2Q9P270 581 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 EPS15L1Q9UBC2 864 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 GNEQ9Y223 722 aaKnown RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 AKAP2Q9Y2D5 859 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 NCKAP5LQ9HCH0 1330 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 FOSL2P15408 326 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 ZNF326Q5BKZ1 582 aaKnown RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 MKL1Q969V6 931 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 NAP1L2Q9ULW6 460 aaPredicted RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 REREQ9P2R6 1566 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 EIF3JO75822 258 aaKnown RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 TCF3P15923 654 aa1.76□□□□□ -2.13
CEP290-201ENST00000309041 FAM133BQ5BKY9 247 aaKnown RBP1.76□□□□□ -2.13
CEP290-201ENST00000309041 MS4A4AQ96JQ5 239 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms