RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 CDCA8Q53HL2 280 aa17.76■□□□□ 0.43
SHANK2-AS3-201ENST00000307548 KCNA6P17658 529 aa17.74■□□□□ 0.43
SHANK2-AS3-201ENST00000307548 DISP3Q9P2K9 1392 aa17.74■□□□□ 0.43
SHANK2-AS3-201ENST00000307548 WAPLQ7Z5K2 1190 aa17.74■□□□□ 0.43
SHANK2-AS3-201ENST00000307548 ANP32CO43423 234 aa17.72■□□□□ 0.43
SHANK2-AS3-201ENST00000307548 POGKQ9P215 609 aa17.71■□□□□ 0.43
SHANK2-AS3-201ENST00000307548 TULP4Q9NRJ4 1543 aa17.71■□□□□ 0.43
SHANK2-AS3-201ENST00000307548 STRCP1A6NGW2 1772 aa17.71■□□□□ 0.43
SHANK2-AS3-201ENST00000307548 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.7■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 NKTRP30414 1462 aaKnown RBP17.7■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 SAFB2Q14151 953 aaKnown RBP eCLIP17.7■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 PUS7Q96PZ0 661 aaKnown RBP17.7■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 ADRA2BP18089 450 aa17.69■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 ADGRB2O60241 1585 aa17.69■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 POLR3GLQ9BT43 218 aa17.67■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 MINK1Q8N4C8 1332 aaPredicted RBP17.67■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 CCER2I3L3R5 266 aa17.67■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 EVC2Q86UK5 1308 aa17.65■□□□□ 0.42
SHANK2-AS3-201ENST00000307548 ZNF335Q9H4Z2 1342 aaPredicted RBP17.64■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 ILDR1Q86SU0 546 aaPredicted RBP17.64■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 NALCNQ8IZF0 1738 aa17.63■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 PER1O15534 1290 aaPredicted RBP17.62■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 PRKRIP1Q9H875 184 aaPredicted RBP17.62■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 ADGRL3Q9HAR2 1447 aa17.62■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 LTBP4Q8N2S1 1624 aa17.62■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 WASLO00401 505 aaPredicted RBP17.61■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 CDK19Q9BWU1 502 aa17.61■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 NCOA3Q9Y6Q9 1424 aa17.61■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 MYOM1P52179 1685 aa17.6■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 CDC42BPGQ6DT37 1551 aa17.6■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 PROSER2Q86WR7 435 aaPredicted RBP17.6■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 RBM33Q96EV2 1170 aaKnown RBP17.59■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 PANK3Q9H999 370 aa17.59■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 LRRC7Q96NW7 1537 aa17.59■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 TMEM94Q12767 1356 aa17.59■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 KTN1Q86UP2 1357 aaKnown RBP17.59■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 CABP2Q9NPB3 220 aa17.58■□□□□ 0.41
SHANK2-AS3-201ENST00000307548 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 ATP7BP35670 1465 aa17.56■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 ATAD2Q6PL18 1390 aa17.56■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 SRPK2P78362 688 aaKnown RBP17.56■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 FMN2Q9NZ56 1722 aa17.56■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 PRR36Q9H6K5 1346 aa17.56■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 CERKQ8TCT0 537 aa17.55■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 USP32Q8NFA0 1604 aa17.55■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 RALBP1Q15311 655 aa17.54■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 NINLQ9Y2I6 1382 aa17.53■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 ANKARQ7Z5J8 1434 aa17.53■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 TOPAZ1Q8N9V7 1692 aa17.53■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 NPC1L1Q9UHC9 1359 aa17.53■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 DCCP43146 1447 aa17.52■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 NUDT16Q96DE0 195 aaKnown RBP17.52■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 C19orf44Q9H6X5 657 aa17.52■□□□□ 0.4
SHANK2-AS3-201ENST00000307548 SLC12A5Q9H2X9 1139 aa17.51■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 CD163L1Q9NR16 1453 aa17.5■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 KNSTRNQ9Y448 316 aa17.5■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 PPIP5K1Q6PFW1 1433 aa17.48■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 AMER1Q5JTC6 1135 aaPredicted RBP17.48■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 CABP1Q9NZU7 370 aa17.48■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 MSH6P52701 1360 aa17.47■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 ANKRD36BQ8N2N9 1353 aa17.47■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 TMC1Q8TDI8 760 aa17.47■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 RGPD8O14715 1765 aaPredicted RBP17.46■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 MST1RQ04912 1400 aa17.46■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 CPSF1Q10570 1443 aaKnown RBP17.46■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 PLEKHG3A1L390 1219 aa17.46■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 CARD14Q9BXL6 1004 aa17.46■□□□□ 0.39
SHANK2-AS3-201ENST00000307548 FBXO41Q8TF61 875 aa17.45■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 C1orf167Q5SNV9 1468 aa17.44■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 ATF3P18847 181 aa17.43■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 CADPS2Q86UW7 1296 aa17.43■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 POLR3AO14802 1390 aaPredicted RBP17.43■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 TERF2IPQ9NYB0 399 aa17.42■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 AKAP12Q02952 1782 aa17.41■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 BRD4O60885 1362 aaPredicted RBP17.41■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 MON2Q7Z3U7 1717 aa17.41■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 CCDC184Q52MB2 194 aa17.4■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 NLRP13Q86W25 1043 aa17.4■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 ACEP12821 1306 aa17.4■□□□□ 0.38
SHANK2-AS3-201ENST00000307548 CC2D1BQ5T0F9 858 aaKnown RBP17.39■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 ORAI2Q96SN7 254 aa17.39■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 PHF8Q9UPP1 1060 aa17.39■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 SSH2Q76I76 1423 aa17.38■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 PMFBP1Q8TBY8 1022 aa17.38■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 NRKQ7Z2Y5 1582 aa17.38■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 USP6P35125 1406 aa17.37■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 KIF1AQ12756 1690 aa17.37■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-AS3-201ENST00000307548 EDC4Q6P2E9 1401 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms