RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 SF3B2Q13435 895 aaKnown RBP15.43■□□□□ 0.06
COL4A3-201ENST00000304990 ESCO1Q5FWF5 840 aa15.42■□□□□ 0.06
COL4A3-201ENST00000304990 GJD4Q96KN9 370 aaPredicted RBP15.42■□□□□ 0.06
COL4A3-201ENST00000304990 CLTCL1P53675 1640 aa15.41■□□□□ 0.06
COL4A3-201ENST00000304990 NPHP3Q7Z494 1330 aa15.41■□□□□ 0.06
COL4A3-201ENST00000304990 ROBO2Q9HCK4 1378 aa15.39■□□□□ 0.05
COL4A3-201ENST00000304990 BLMP54132 1417 aaPredicted RBP15.39■□□□□ 0.05
COL4A3-201ENST00000304990 MYOM2P54296 1465 aa15.39■□□□□ 0.05
COL4A3-201ENST00000304990 BCL9LQ86UU0 1499 aa15.39■□□□□ 0.05
COL4A3-201ENST00000304990 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.38■□□□□ 0.05
COL4A3-201ENST00000304990 VGFO15240 615 aaPredicted RBP15.38■□□□□ 0.05
COL4A3-201ENST00000304990 XPCQ01831 940 aaPredicted RBP15.38■□□□□ 0.05
COL4A3-201ENST00000304990 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
COL4A3-201ENST00000304990 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
COL4A3-201ENST00000304990 HFM1A2PYH4 1435 aa15.36■□□□□ 0.05
COL4A3-201ENST00000304990 FOXO3O43524 673 aa15.36■□□□□ 0.05
COL4A3-201ENST00000304990 HAP1P54257 671 aaPredicted RBP15.36■□□□□ 0.05
COL4A3-201ENST00000304990 DEFB132Q7Z7B7 95 aa15.36■□□□□ 0.05
COL4A3-201ENST00000304990 UNC5CLQ8IV45 518 aa15.35■□□□□ 0.05
COL4A3-201ENST00000304990 CCDC9Q9Y3X0 531 aaKnown RBP15.35■□□□□ 0.05
COL4A3-201ENST00000304990 RALGAPBQ86X10 1494 aa15.34■□□□□ 0.05
COL4A3-201ENST00000304990 PXDNQ92626 1479 aa15.34■□□□□ 0.05
COL4A3-201ENST00000304990 GLI3P10071 1580 aa15.34■□□□□ 0.05
COL4A3-201ENST00000304990 CDC42BPGQ6DT37 1551 aa15.34■□□□□ 0.05
COL4A3-201ENST00000304990 LRP5O75197 1615 aa15.34■□□□□ 0.05
COL4A3-201ENST00000304990 NUTM2FA1L443 756 aa15.33■□□□□ 0.04
COL4A3-201ENST00000304990 A0A0G2JS52 829 aa15.32■□□□□ 0.04
COL4A3-201ENST00000304990 MYT1Q01538 1121 aa15.32■□□□□ 0.04
COL4A3-201ENST00000304990 SRCAPQ6ZRS2 3230 aa15.32■□□□□ 0.04
COL4A3-201ENST00000304990 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
COL4A3-201ENST00000304990 PSDA5PKW4 1024 aaPredicted RBP15.3■□□□□ 0.04
COL4A3-201ENST00000304990 PPLO60437 1756 aa15.3■□□□□ 0.04
COL4A3-201ENST00000304990 SEPT12Q8IYM1 358 aa15.3■□□□□ 0.04
COL4A3-201ENST00000304990 USP32Q8NFA0 1604 aa15.29■□□□□ 0.04
COL4A3-201ENST00000304990 EP400Q96L91 3159 aa15.29■□□□□ 0.04
COL4A3-201ENST00000304990 SLIT2O94813 1529 aa15.29■□□□□ 0.04
COL4A3-201ENST00000304990 PRAG1Q86YV5 1406 aa15.29■□□□□ 0.04
COL4A3-201ENST00000304990 STK26Q9P289 416 aa15.29■□□□□ 0.04
COL4A3-201ENST00000304990 KIF1AQ12756 1690 aa15.28■□□□□ 0.04
COL4A3-201ENST00000304990 NAIPQ13075 1403 aa15.28■□□□□ 0.04
COL4A3-201ENST00000304990 RPGRIP1LQ68CZ1 1315 aa15.28■□□□□ 0.04
COL4A3-201ENST00000304990 BAG6P46379 1132 aa15.28■□□□□ 0.04
COL4A3-201ENST00000304990 PLCH1Q4KWH8 1693 aa15.28■□□□□ 0.04
COL4A3-201ENST00000304990 KRT27Q7Z3Y8 459 aa15.27■□□□□ 0.04
COL4A3-201ENST00000304990 SPATA31A3Q5VYP0 1347 aa15.26■□□□□ 0.03
COL4A3-201ENST00000304990 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
COL4A3-201ENST00000304990 CCDC144AA2RUR9 1427 aa15.26■□□□□ 0.03
COL4A3-201ENST00000304990 LMOD2Q6P5Q4 547 aa15.25■□□□□ 0.03
COL4A3-201ENST00000304990 KRT28Q7Z3Y7 464 aa15.25■□□□□ 0.03
COL4A3-201ENST00000304990 FMN2Q9NZ56 1722 aa15.25■□□□□ 0.03
COL4A3-201ENST00000304990 VPS72Q15906 364 aa15.24■□□□□ 0.03
COL4A3-201ENST00000304990 WAPLQ7Z5K2 1190 aa15.24■□□□□ 0.03
COL4A3-201ENST00000304990 HRCP23327 699 aa15.23■□□□□ 0.03
COL4A3-201ENST00000304990 PSME1Q06323 249 aa15.23■□□□□ 0.03
COL4A3-201ENST00000304990 RGPD8O14715 1765 aaPredicted RBP15.23■□□□□ 0.03
COL4A3-201ENST00000304990 CABLES1Q8TDN4 633 aa15.22■□□□□ 0.03
COL4A3-201ENST00000304990 RGPD1P0DJD0 1748 aa15.22■□□□□ 0.03
COL4A3-201ENST00000304990 IFT172Q9UG01 1749 aa15.22■□□□□ 0.03
COL4A3-201ENST00000304990 PPARGC1BQ86YN6 1023 aaKnown RBP15.21■□□□□ 0.03
COL4A3-201ENST00000304990 KNDC1Q76NI1 1749 aa15.2■□□□□ 0.02
COL4A3-201ENST00000304990 ABCA3Q99758 1704 aa15.2■□□□□ 0.02
COL4A3-201ENST00000304990 TNS3Q68CZ2 1445 aa15.2■□□□□ 0.02
COL4A3-201ENST00000304990 MAPK8IP2Q13387 824 aaPredicted RBP15.19■□□□□ 0.02
COL4A3-201ENST00000304990 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
COL4A3-201ENST00000304990 ONECUT3O60422 494 aaPredicted RBP15.18■□□□□ 0.02
COL4A3-201ENST00000304990 EN1Q05925 392 aaPredicted RBP15.18■□□□□ 0.02
COL4A3-201ENST00000304990 R3HDM1Q15032 1099 aaKnown RBP15.18■□□□□ 0.02
COL4A3-201ENST00000304990 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
COL4A3-201ENST00000304990 PHF8Q9UPP1 1060 aa15.18■□□□□ 0.02
COL4A3-201ENST00000304990 ADGRF5Q8IZF2 1346 aa15.17■□□□□ 0.02
COL4A3-201ENST00000304990 RRBP1Q9P2E9 1410 aaKnown RBP15.17■□□□□ 0.02
COL4A3-201ENST00000304990 PLEKHH1Q9ULM0 1364 aa15.17■□□□□ 0.02
COL4A3-201ENST00000304990 RGL3Q3MIN7 710 aa15.17■□□□□ 0.02
COL4A3-201ENST00000304990 TMEM132EQ6IEE7 984 aa15.17■□□□□ 0.02
COL4A3-201ENST00000304990 TECPR2O15040 1411 aa15.17■□□□□ 0.02
COL4A3-201ENST00000304990 ARHGEF10O15013 1369 aa15.16■□□□□ 0.02
COL4A3-201ENST00000304990 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
COL4A3-201ENST00000304990 NRAPQ86VF7 1730 aa15.14■□□□□ 0.01
COL4A3-201ENST00000304990 ABCC11Q96J66 1382 aa15.14■□□□□ 0.01
COL4A3-201ENST00000304990 FAM83GA6ND36 823 aa15.14■□□□□ 0.01
COL4A3-201ENST00000304990 BTG4Q9NY30 223 aa15.14■□□□□ 0.01
COL4A3-201ENST00000304990 SBNO1A3KN83 1393 aa15.13■□□□□ 0.01
COL4A3-201ENST00000304990 FAM182BQ5T319 152 aa15.13■□□□□ 0.01
COL4A3-201ENST00000304990 YTHDC2Q9H6S0 1430 aaKnown RBP15.12■□□□□ 0.01
COL4A3-201ENST00000304990 COL14A1Q05707 1796 aaKnown RBP15.12■□□□□ 0.01
COL4A3-201ENST00000304990 YY1P25490 414 aa15.12■□□□□ 0.01
COL4A3-201ENST00000304990 NRXN1Q9ULB1 1477 aa15.12■□□□□ 0.01
COL4A3-201ENST00000304990 TNS1Q9HBL0 1735 aaKnown RBP15.12■□□□□ 0.01
COL4A3-201ENST00000304990 ANKRD30BQ9BXX2 1392 aa15.11■□□□□ 0.01
COL4A3-201ENST00000304990 ADGRB2O60241 1585 aa15.11■□□□□ 0.01
COL4A3-201ENST00000304990 DCAF8L1A6NGE4 600 aa15.1■□□□□ 0.01
COL4A3-201ENST00000304990 SAFB2Q14151 953 aaKnown RBP eCLIP15.1■□□□□ 0.01
COL4A3-201ENST00000304990 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
COL4A3-201ENST00000304990 EZH2Q15910 746 aaKnown RBP15.09■□□□□ 0.01
COL4A3-201ENST00000304990 PIK3C2GO75747 1445 aa15.08■□□□□ 0
COL4A3-201ENST00000304990 SIRT1Q96EB6 747 aa15.07■□□□□ 0
COL4A3-201ENST00000304990 POGKQ9P215 609 aa15.07■□□□□ 0
COL4A3-201ENST00000304990 GPRASP1Q5JY77 1395 aa15.07■□□□□ 0
COL4A3-201ENST00000304990 DHX57Q6P158 1386 aaKnown RBP15.07■□□□□ 0
COL4A3-201ENST00000304990 TRIM37O94972 964 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms