RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 SETD1AO15047 1707 aaKnown RBP8.57□□□□□ -1.04
ZNF440-201ENST00000304060 SHPRHQ149N8 1683 aa8.57□□□□□ -1.04
ZNF440-201ENST00000304060 ASXL1Q8IXJ9 1541 aa8.57□□□□□ -1.04
ZNF440-201ENST00000304060 SOS2Q07890 1332 aaPredicted RBP8.56□□□□□ -1.04
ZNF440-201ENST00000304060 VPS72Q15906 364 aa8.56□□□□□ -1.04
ZNF440-201ENST00000304060 PRDM11Q9NQV5 511 aa8.56□□□□□ -1.04
ZNF440-201ENST00000304060 COL16A1Q07092 1604 aaPredicted RBP8.55□□□□□ -1.04
ZNF440-201ENST00000304060 PARD3Q8TEW0 1356 aa8.55□□□□□ -1.04
ZNF440-201ENST00000304060 LRP6O75581 1613 aa8.55□□□□□ -1.04
ZNF440-201ENST00000304060 NGDNQ8NEJ9 315 aaKnown RBP8.55□□□□□ -1.04
ZNF440-201ENST00000304060 STK26Q9P289 416 aa8.55□□□□□ -1.04
ZNF440-201ENST00000304060 MST1RQ04912 1400 aa8.55□□□□□ -1.04
ZNF440-201ENST00000304060 PHF8Q9UPP1 1060 aa8.55□□□□□ -1.04
ZNF440-201ENST00000304060 PSDA5PKW4 1024 aaPredicted RBP8.54□□□□□ -1.04
ZNF440-201ENST00000304060 C1orf167Q5SNV9 1468 aa8.54□□□□□ -1.04
ZNF440-201ENST00000304060 LRRIQ1Q96JM4 1722 aa8.54□□□□□ -1.04
ZNF440-201ENST00000304060 KANK4Q5T7N3 995 aaPredicted RBP8.54□□□□□ -1.04
ZNF440-201ENST00000304060 PTPN23Q9H3S7 1636 aa8.54□□□□□ -1.04
ZNF440-201ENST00000304060 ZFYVE9O95405 1425 aa8.54□□□□□ -1.04
ZNF440-201ENST00000304060 ZBTB22O15209 634 aa8.54□□□□□ -1.04
ZNF440-201ENST00000304060 SENP3-EIF4A1A0A087X0R7 540 aa8.53□□□□□ -1.04
ZNF440-201ENST00000304060 PAK3O75914 559 aaPredicted RBP8.53□□□□□ -1.04
ZNF440-201ENST00000304060 ATRNO75882 1429 aa8.53□□□□□ -1.04
ZNF440-201ENST00000304060 DEFB132Q7Z7B7 95 aa8.53□□□□□ -1.04
ZNF440-201ENST00000304060 ALKQ9UM73 1620 aa8.53□□□□□ -1.04
ZNF440-201ENST00000304060 APBA3O96018 575 aa8.53□□□□□ -1.04
ZNF440-201ENST00000304060 ORAI2Q96SN7 254 aa8.53□□□□□ -1.04
ZNF440-201ENST00000304060 R3HDM1Q15032 1099 aaKnown RBP8.52□□□□□ -1.04
ZNF440-201ENST00000304060 ROCK1Q13464 1354 aa8.52□□□□□ -1.05
ZNF440-201ENST00000304060 DHX57Q6P158 1386 aaKnown RBP8.52□□□□□ -1.05
ZNF440-201ENST00000304060 NUTM2FA1L443 756 aa8.51□□□□□ -1.05
ZNF440-201ENST00000304060 ADAMTS13Q76LX8 1427 aa8.51□□□□□ -1.05
ZNF440-201ENST00000304060 TET3O43151 1660 aa8.51□□□□□ -1.05
ZNF440-201ENST00000304060 STK32BQ9NY57 414 aa8.51□□□□□ -1.05
ZNF440-201ENST00000304060 ANKRD30BQ9BXX2 1392 aa8.51□□□□□ -1.05
ZNF440-201ENST00000304060 ADGRL2O95490 1459 aa8.51□□□□□ -1.05
ZNF440-201ENST00000304060 XPCQ01831 940 aaPredicted RBP8.51□□□□□ -1.05
ZNF440-201ENST00000304060 STRCP1A6NGW2 1772 aa8.5□□□□□ -1.05
ZNF440-201ENST00000304060 DDX17Q92841 729 aaKnown RBP8.5□□□□□ -1.05
ZNF440-201ENST00000304060 BCL11BQ9C0K0 894 aaPredicted RBP8.5□□□□□ -1.05
ZNF440-201ENST00000304060 FAM98CQ17RN3 349 aaKnown RBP8.49□□□□□ -1.05
ZNF440-201ENST00000304060 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.49□□□□□ -1.05
ZNF440-201ENST00000304060 SPATA31A3Q5VYP0 1347 aa8.49□□□□□ -1.05
ZNF440-201ENST00000304060 NINLQ9Y2I6 1382 aa8.48□□□□□ -1.05
ZNF440-201ENST00000304060 POLD1P28340 1107 aa8.48□□□□□ -1.05
ZNF440-201ENST00000304060 EN1Q05925 392 aaPredicted RBP8.48□□□□□ -1.05
ZNF440-201ENST00000304060 CHD2O14647 1828 aaKnown RBP8.48□□□□□ -1.05
ZNF440-201ENST00000304060 STRN4Q9NRL3 753 aa8.47□□□□□ -1.05
ZNF440-201ENST00000304060 BTG4Q9NY30 223 aa8.47□□□□□ -1.05
ZNF440-201ENST00000304060 KCNQ2O43526 872 aa8.47□□□□□ -1.05
ZNF440-201ENST00000304060 RGL3Q3MIN7 710 aa8.47□□□□□ -1.05
ZNF440-201ENST00000304060 CDCA7Q9BWT1 371 aaPredicted RBP8.47□□□□□ -1.05
ZNF440-201ENST00000304060 TIMELESSQ9UNS1 1208 aa8.47□□□□□ -1.05
ZNF440-201ENST00000304060 UNC13BO14795 1591 aa8.46□□□□□ -1.05
ZNF440-201ENST00000304060 SIRT1Q96EB6 747 aa8.46□□□□□ -1.05
ZNF440-201ENST00000304060 STAC3Q96MF2 364 aa8.46□□□□□ -1.05
ZNF440-201ENST00000304060 ZBTB7CA1YPR0 619 aa8.46□□□□□ -1.06
ZNF440-201ENST00000304060 SBNO1A3KN83 1393 aa8.46□□□□□ -1.06
ZNF440-201ENST00000304060 RALGAPBQ86X10 1494 aa8.46□□□□□ -1.06
ZNF440-201ENST00000304060 GPR162Q16538 588 aa8.46□□□□□ -1.06
ZNF440-201ENST00000304060 ADGRB2O60241 1585 aa8.45□□□□□ -1.06
ZNF440-201ENST00000304060 RRBP1Q9P2E9 1410 aaKnown RBP8.45□□□□□ -1.06
ZNF440-201ENST00000304060 CSB-PGBD3P0DP91 1061 aa8.45□□□□□ -1.06
ZNF440-201ENST00000304060 METP08581 1390 aa8.45□□□□□ -1.06
ZNF440-201ENST00000304060 NAIPQ13075 1403 aa8.45□□□□□ -1.06
ZNF440-201ENST00000304060 KLHL34Q8N239 644 aa8.44□□□□□ -1.06
ZNF440-201ENST00000304060 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
ZNF440-201ENST00000304060 TNS3Q68CZ2 1445 aa8.44□□□□□ -1.06
ZNF440-201ENST00000304060 DAXXQ9UER7 740 aaPredicted RBP8.44□□□□□ -1.06
ZNF440-201ENST00000304060 NLRP13Q86W25 1043 aa8.43□□□□□ -1.06
ZNF440-201ENST00000304060 TRIM37O94972 964 aa8.43□□□□□ -1.06
ZNF440-201ENST00000304060 GCC2Q8IWJ2 1684 aa8.43□□□□□ -1.06
ZNF440-201ENST00000304060 FAM83GA6ND36 823 aa8.43□□□□□ -1.06
ZNF440-201ENST00000304060 SETBP1Q9Y6X0 1596 aa8.43□□□□□ -1.06
ZNF440-201ENST00000304060 TMEM131LA2VDJ0 1609 aa8.42□□□□□ -1.06
ZNF440-201ENST00000304060 USP35Q9P2H5 1018 aa8.42□□□□□ -1.06
ZNF440-201ENST00000304060 THRAP3Q9Y2W1 955 aaKnown RBP8.42□□□□□ -1.06
ZNF440-201ENST00000304060 XIRP1Q702N8 1843 aaKnown RBP8.42□□□□□ -1.06
ZNF440-201ENST00000304060 LOC105371045A0A1W2PR82 267 aa8.41□□□□□ -1.06
ZNF440-201ENST00000304060 GRIN3BO60391 1043 aa8.41□□□□□ -1.06
ZNF440-201ENST00000304060 ABCC11Q96J66 1382 aa8.41□□□□□ -1.06
ZNF440-201ENST00000304060 PTPRUQ92729 1446 aa8.41□□□□□ -1.06
ZNF440-201ENST00000304060 MYOM2P54296 1465 aa8.41□□□□□ -1.06
ZNF440-201ENST00000304060 NHSL1Q5SYE7 1610 aa8.41□□□□□ -1.06
ZNF440-201ENST00000304060 TCP11L2Q8N4U5 519 aa8.41□□□□□ -1.06
ZNF440-201ENST00000304060 SAFB2Q14151 953 aaKnown RBP eCLIP8.41□□□□□ -1.06
ZNF440-201ENST00000304060 ONECUT3O60422 494 aaPredicted RBP8.4□□□□□ -1.06
ZNF440-201ENST00000304060 CROCC2H7BZ55 1655 aa8.4□□□□□ -1.06
ZNF440-201ENST00000304060 ROBO2Q9HCK4 1378 aa8.4□□□□□ -1.06
ZNF440-201ENST00000304060 EZH2Q15910 746 aaKnown RBP8.4□□□□□ -1.07
ZNF440-201ENST00000304060 PMFBP1Q8TBY8 1022 aa8.4□□□□□ -1.07
ZNF440-201ENST00000304060 CABLES1Q8TDN4 633 aa8.4□□□□□ -1.07
ZNF440-201ENST00000304060 DDB1Q16531 1140 aa8.39□□□□□ -1.07
ZNF440-201ENST00000304060 BCL9LQ86UU0 1499 aa8.38□□□□□ -1.07
ZNF440-201ENST00000304060 SPATA31A5Q5VU36 1347 aa8.38□□□□□ -1.07
ZNF440-201ENST00000304060 SPATA31A7Q8IWB4 1347 aa8.38□□□□□ -1.07
ZNF440-201ENST00000304060 TOM1L2Q6ZVM7 507 aa8.38□□□□□ -1.07
ZNF440-201ENST00000304060 WAPLQ7Z5K2 1190 aa8.38□□□□□ -1.07
ZNF440-201ENST00000304060 ERICH6Q7L0X2 663 aa8.38□□□□□ -1.07
ZNF440-201ENST00000304060 ANKARQ7Z5J8 1434 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms