RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 ROBO1Q9Y6N7 1651 aa40.99■■■■■ 4.15
COPS6-201ENST00000303904 CCER1Q8TC90 406 aaPredicted RBP40.97■■■■■ 4.15
COPS6-201ENST00000303904 PLEKHH1Q9ULM0 1364 aa40.96■■■■■ 4.15
COPS6-201ENST00000303904 MST1RQ04912 1400 aa40.95■■■■■ 4.15
COPS6-201ENST00000303904 CDC42BPGQ6DT37 1551 aa40.95■■■■■ 4.15
COPS6-201ENST00000303904 NBPF1Q3BBV0 1214 aa40.91■■■■■ 4.14
COPS6-201ENST00000303904 SAFB2Q14151 953 aaKnown RBP eCLIP40.9■■■■■ 4.14
COPS6-201ENST00000303904 TIMELESSQ9UNS1 1208 aa40.87■■■■■ 4.13
COPS6-201ENST00000303904 ROCK2O75116 1388 aaKnown RBP40.87■■■■■ 4.13
COPS6-201ENST00000303904 BRINP3Q76B58 766 aa40.85■■■■■ 4.13
COPS6-201ENST00000303904 TRPM1Q7Z4N2 1603 aa40.85■■■■■ 4.13
COPS6-201ENST00000303904 C1orf167Q5SNV9 1468 aa40.84■■■■■ 4.13
COPS6-201ENST00000303904 ARHGEF28Q8N1W1 1705 aaKnown RBP40.8■■■■■ 4.12
COPS6-201ENST00000303904 NBPF8Q3BBV2 869 aa40.77■■■■■ 4.12
COPS6-201ENST00000303904 EIF3AQ14152 1382 aaKnown RBP40.76■■■■■ 4.12
COPS6-201ENST00000303904 MINK1Q8N4C8 1332 aaPredicted RBP40.76■■■■■ 4.12
COPS6-201ENST00000303904 ADGRB2O60241 1585 aa40.75■■■■■ 4.11
COPS6-201ENST00000303904 AHDC1Q5TGY3 1603 aaPredicted RBP40.74■■■■■ 4.11
COPS6-201ENST00000303904 PHLPP1O60346 1717 aa40.74■■■■■ 4.11
COPS6-201ENST00000303904 ESCO1Q5FWF5 840 aa40.74■■■■■ 4.11
COPS6-201ENST00000303904 FMN2Q9NZ56 1722 aa40.72■■■■■ 4.11
COPS6-201ENST00000303904 NUTM2FA1L443 756 aa40.71■■■■■ 4.11
COPS6-201ENST00000303904 HIRIP3Q9BW71 556 aaPredicted RBP40.71■■■■■ 4.11
COPS6-201ENST00000303904 CENPJQ9HC77 1338 aaPredicted RBP40.71■■■■■ 4.11
COPS6-201ENST00000303904 RALGAPBQ86X10 1494 aa40.7■■■■■ 4.11
COPS6-201ENST00000303904 GPRASP1Q5JY77 1395 aa40.7■■■■■ 4.11
COPS6-201ENST00000303904 ORAI2Q96SN7 254 aa40.7■■■■■ 4.11
COPS6-201ENST00000303904 CARD11Q9BXL7 1154 aa40.69■■■■■ 4.1
COPS6-201ENST00000303904 WASLO00401 505 aaPredicted RBP40.67■■■■■ 4.1
COPS6-201ENST00000303904 ANKARQ7Z5J8 1434 aa40.65■■■■■ 4.1
COPS6-201ENST00000303904 NHSL1Q5SYE7 1610 aa40.63■■■■■ 4.09
COPS6-201ENST00000303904 NPHP3Q7Z494 1330 aa40.62■■■■■ 4.09
COPS6-201ENST00000303904 COL16A1Q07092 1604 aaPredicted RBP40.61■■■■■ 4.09
COPS6-201ENST00000303904 JCADQ9P266 1359 aa40.61■■■■■ 4.09
COPS6-201ENST00000303904 LRRC59Q96AG4 307 aaKnown RBP40.59■■■■■ 4.09
COPS6-201ENST00000303904 TULP4Q9NRJ4 1543 aa40.57■■■■■ 4.09
COPS6-201ENST00000303904 KIF1AQ12756 1690 aa40.56■■■■■ 4.08
COPS6-201ENST00000303904 PHF8Q9UPP1 1060 aa40.54■■■■■ 4.08
COPS6-201ENST00000303904 QRICH2Q9H0J4 1663 aa40.54■■■■■ 4.08
COPS6-201ENST00000303904 FOXO3O43524 673 aa40.53■■■■■ 4.08
COPS6-201ENST00000303904 CDK19Q9BWU1 502 aa40.53■■■■■ 4.08
COPS6-201ENST00000303904 DDX17Q92841 729 aaKnown RBP40.52■■■■■ 4.08
COPS6-201ENST00000303904 SOS2Q07890 1332 aaPredicted RBP40.51■■■■■ 4.08
COPS6-201ENST00000303904 SRPK2P78362 688 aaKnown RBP40.48■■■■■ 4.07
COPS6-201ENST00000303904 EVC2Q86UK5 1308 aa40.47■■■■■ 4.07
COPS6-201ENST00000303904 NUDT16Q96DE0 195 aaKnown RBP40.46■■■■■ 4.07
COPS6-201ENST00000303904 RGPD8O14715 1765 aaPredicted RBP40.46■■■■■ 4.07
COPS6-201ENST00000303904 SPATA31A6Q5VVP1 1343 aa40.46■■■■■ 4.07
COPS6-201ENST00000303904 USP32Q8NFA0 1604 aa40.45■■■■■ 4.07
COPS6-201ENST00000303904 PSME1Q06323 249 aa40.43■■■■■ 4.06
COPS6-201ENST00000303904 PRR36Q9H6K5 1346 aa40.43■■■■■ 4.06
COPS6-201ENST00000303904 SHPRHQ149N8 1683 aa40.42■■■■■ 4.06
COPS6-201ENST00000303904 ATP7BP35670 1465 aa40.42■■■■■ 4.06
COPS6-201ENST00000303904 PMFBP1Q8TBY8 1022 aa40.42■■■■■ 4.06
COPS6-201ENST00000303904 CCDC61Q9Y6R9 512 aa40.42■■■■■ 4.06
COPS6-201ENST00000303904 ITSN1Q15811 1721 aa40.41■■■■■ 4.06
COPS6-201ENST00000303904 SBNO2Q9Y2G9 1366 aa40.41■■■■■ 4.06
COPS6-201ENST00000303904 SLC24A1O60721 1099 aa40.41■■■■■ 4.06
COPS6-201ENST00000303904 MED1Q15648 1581 aaPredicted RBP40.4■■■■■ 4.06
COPS6-201ENST00000303904 PXDNQ92626 1479 aa40.39■■■■■ 4.06
COPS6-201ENST00000303904 KRT28Q7Z3Y7 464 aa40.38■■■■■ 4.05
COPS6-201ENST00000303904 NGDNQ8NEJ9 315 aaKnown RBP40.38■■■■■ 4.05
COPS6-201ENST00000303904 DISP3Q9P2K9 1392 aa40.37■■■■■ 4.05
COPS6-201ENST00000303904 XPCQ01831 940 aaPredicted RBP40.36■■■■■ 4.05
COPS6-201ENST00000303904 CABP2Q9NPB3 220 aa40.34■■■■■ 4.05
COPS6-201ENST00000303904 PHF23Q9BUL5 403 aaPredicted RBP40.33■■■■■ 4.05
COPS6-201ENST00000303904 PNPLA6Q8IY17 1366 aa40.33■■■■■ 4.05
COPS6-201ENST00000303904 USP47Q96K76 1375 aa40.3■■■■■ 4.04
COPS6-201ENST00000303904 ST20-MTHFSA0A0A6YYL1 179 aa40.27■■■■■ 4.04
COPS6-201ENST00000303904 SBNO1A3KN83 1393 aa40.27■■■■■ 4.04
COPS6-201ENST00000303904 PLEKHG3A1L390 1219 aa40.26■■■■■ 4.04
COPS6-201ENST00000303904 MEX3CQ5U5Q3 659 aaKnown RBP40.26■■■■■ 4.04
COPS6-201ENST00000303904 PPIP5K1Q6PFW1 1433 aa40.26■■■■■ 4.04
COPS6-201ENST00000303904 SPATA31A3Q5VYP0 1347 aa40.26■■■■■ 4.04
COPS6-201ENST00000303904 TOPAZ1Q8N9V7 1692 aa40.26■■■■■ 4.04
COPS6-201ENST00000303904 ATAD2Q6PL18 1390 aa40.26■■■■■ 4.03
COPS6-201ENST00000303904 NUTM2BA6NNL0 878 aaPredicted RBP40.25■■■■■ 4.03
COPS6-201ENST00000303904 NUTM2EB1AL46 878 aaPredicted RBP40.25■■■■■ 4.03
COPS6-201ENST00000303904 NUTM2AQ8IVF1 878 aaPredicted RBP40.25■■■■■ 4.03
COPS6-201ENST00000303904 TNS3Q68CZ2 1445 aa40.23■■■■■ 4.03
COPS6-201ENST00000303904 POLR3AO14802 1390 aaPredicted RBP40.21■■■■■ 4.03
COPS6-201ENST00000303904 ARHGEF10O15013 1369 aa40.21■■■■■ 4.03
COPS6-201ENST00000303904 ACEP12821 1306 aa40.21■■■■■ 4.03
COPS6-201ENST00000303904 LMOD2Q6P5Q4 547 aa40.19■■■■■ 4.02
COPS6-201ENST00000303904 COL22A1Q8NFW1 1626 aaPredicted RBP40.18■■■■■ 4.02
COPS6-201ENST00000303904 CABP1Q9NZU7 370 aa40.17■■■■■ 4.02
COPS6-201ENST00000303904 PUS7Q96PZ0 661 aaKnown RBP40.16■■■■■ 4.02
COPS6-201ENST00000303904 PAK3O75914 559 aaPredicted RBP40.16■■■■■ 4.02
COPS6-201ENST00000303904 LRP6O75581 1613 aa40.15■■■■■ 4.02
COPS6-201ENST00000303904 TESK2Q96S53 571 aa40.15■■■■■ 4.02
COPS6-201ENST00000303904 TMF1P82094 1093 aa40.13■■■■■ 4.01
COPS6-201ENST00000303904 BRD4O60885 1362 aaPredicted RBP40.11■■■■■ 4.01
COPS6-201ENST00000303904 HAP1P54257 671 aaPredicted RBP40.1■■■■■ 4.01
COPS6-201ENST00000303904 CDCA8Q53HL2 280 aa40.09■■■■■ 4.01
COPS6-201ENST00000303904 EIF4G2P78344 907 aaKnown RBP eCLIP40.08■■■■■ 4.01
COPS6-201ENST00000303904 ZNF692Q9BU19 519 aaPredicted RBP40.08■■■■■ 4.01
COPS6-201ENST00000303904 TRPM3Q9HCF6 1732 aaPredicted RBP40.08■■■■■ 4.01
COPS6-201ENST00000303904 ADAMTS2O95450 1211 aa40.06■■■■■ 4
COPS6-201ENST00000303904 TMC1Q8TDI8 760 aa40.04■■■■■ 4
COPS6-201ENST00000303904 NINLQ9Y2I6 1382 aa40.01■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms