RNA–Protein interactions for RNA: ENST00000301671.12

GHDC-201, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GHDC, Length 2,650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-201ENST00000301671 FANCAO15360 1455 aa20.47■□□□□ 0.87
GHDC-201ENST00000301671 NGEFQ8N5V2 710 aa20.47■□□□□ 0.87
GHDC-201ENST00000301671 SLC24A1O60721 1099 aa20.45■□□□□ 0.86
GHDC-201ENST00000301671 KIAA1210Q9ULL0 1709 aa20.44■□□□□ 0.86
GHDC-201ENST00000301671 MYOM2P54296 1465 aa20.44■□□□□ 0.86
GHDC-201ENST00000301671 PMFBP1Q8TBY8 1022 aa20.44■□□□□ 0.86
GHDC-201ENST00000301671 U2AF1L5P0DN76 240 aaPredicted RBP20.43■□□□□ 0.86
GHDC-201ENST00000301671 U2AF1Q01081 240 aaKnown RBP eCLIP20.43■□□□□ 0.86
GHDC-201ENST00000301671 SAFB2Q14151 953 aaKnown RBP eCLIP20.43■□□□□ 0.86
GHDC-201ENST00000301671 BECN1Q14457 450 aa20.43■□□□□ 0.86
GHDC-201ENST00000301671 VWDEQ8N2E2 1590 aa20.43■□□□□ 0.86
GHDC-201ENST00000301671 TSR2Q969E8 191 aaKnown RBP20.43■□□□□ 0.86
GHDC-201ENST00000301671 MROH2AA6NES4 1674 aa20.42■□□□□ 0.86
GHDC-201ENST00000301671 CFAP65Q6ZU64 1925 aaKnown RBP20.42■□□□□ 0.86
GHDC-201ENST00000301671 GGT6Q6P531 493 aa20.42■□□□□ 0.86
GHDC-201ENST00000301671 NINLQ9Y2I6 1382 aa20.42■□□□□ 0.86
GHDC-201ENST00000301671 UHRF1BP1LA0JNW5 1464 aa20.41■□□□□ 0.86
GHDC-201ENST00000301671 ADGRL1O94910 1474 aa20.41■□□□□ 0.86
GHDC-201ENST00000301671 ARXQ96QS3 562 aa20.41■□□□□ 0.86
GHDC-201ENST00000301671 SHPRHQ149N8 1683 aa20.41■□□□□ 0.86
GHDC-201ENST00000301671 NLRP1Q9C000 1473 aa20.41■□□□□ 0.86
GHDC-201ENST00000301671 PHF23Q9BUL5 403 aaPredicted RBP20.41■□□□□ 0.86
GHDC-201ENST00000301671 WDR63Q8IWG1 891 aa20.4■□□□□ 0.86
GHDC-201ENST00000301671 MROH1Q8NDA8 1641 aa20.4■□□□□ 0.86
GHDC-201ENST00000301671 KIF1BO60333 1816 aa20.39■□□□□ 0.86
GHDC-201ENST00000301671 TBC1D2Q9BYX2 928 aa20.39■□□□□ 0.85
GHDC-201ENST00000301671 INO80Q9ULG1 1556 aaPredicted RBP20.39■□□□□ 0.85
GHDC-201ENST00000301671 CFAP53Q96M91 514 aa20.39■□□□□ 0.85
GHDC-201ENST00000301671 UPF2Q9HAU5 1272 aaKnown RBP20.39■□□□□ 0.85
GHDC-201ENST00000301671 RWDD1Q9H446 243 aaPredicted RBP20.38■□□□□ 0.85
GHDC-201ENST00000301671 C14orf93Q9H972 538 aaKnown RBP20.38■□□□□ 0.85
GHDC-201ENST00000301671 VIRMAQ69YN4 1812 aaKnown RBP20.38■□□□□ 0.85
GHDC-201ENST00000301671 TBC1D32Q96NH3 1257 aa20.38■□□□□ 0.85
GHDC-201ENST00000301671 CABP2Q9NPB3 220 aa20.38■□□□□ 0.85
GHDC-201ENST00000301671 SBNO2Q9Y2G9 1366 aa20.37■□□□□ 0.85
GHDC-201ENST00000301671 IQSEC2Q5JU85 1478 aa20.37■□□□□ 0.85
GHDC-201ENST00000301671 FTSJ3Q8IY81 847 aaKnown RBP20.37■□□□□ 0.85
GHDC-201ENST00000301671 ANTXR1Q9H6X2 564 aa20.37■□□□□ 0.85
GHDC-201ENST00000301671 U2SURPO15042 1029 aaKnown RBP20.36■□□□□ 0.85
GHDC-201ENST00000301671 MVPQ14764 893 aaKnown RBP20.36■□□□□ 0.85
GHDC-201ENST00000301671 MYH16Q9H6N6 1097 aa20.35■□□□□ 0.85
GHDC-201ENST00000301671 EFCAB6Q5THR3 1501 aa20.35■□□□□ 0.85
GHDC-201ENST00000301671 PPRC1Q5VV67 1664 aaKnown RBP20.35■□□□□ 0.85
GHDC-201ENST00000301671 ZNF518AQ6AHZ1 1483 aa20.34■□□□□ 0.85
GHDC-201ENST00000301671 NRXN1Q9ULB1 1477 aa20.34■□□□□ 0.85
GHDC-201ENST00000301671 EXOSC9Q06265 439 aaKnown RBP20.34■□□□□ 0.85
GHDC-201ENST00000301671 ZKSCAN2Q63HK3 967 aa20.34■□□□□ 0.85
GHDC-201ENST00000301671 MFAP1P55081 439 aaKnown RBP20.33■□□□□ 0.85
GHDC-201ENST00000301671 DZIP1LQ8IYY4 767 aaKnown RBP20.33■□□□□ 0.85
GHDC-201ENST00000301671 SMC4Q9NTJ3 1288 aa20.33■□□□□ 0.85
GHDC-201ENST00000301671 IFT172Q9UG01 1749 aa20.33■□□□□ 0.84
GHDC-201ENST00000301671 ARAP3Q8WWN8 1544 aa20.32■□□□□ 0.84
GHDC-201ENST00000301671 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
GHDC-201ENST00000301671 GGNBP2Q9H3C7 697 aa20.31■□□□□ 0.84
GHDC-201ENST00000301671 STK26Q9P289 416 aa20.31■□□□□ 0.84
GHDC-201ENST00000301671 MYO3AQ8NEV4 1616 aa20.31■□□□□ 0.84
GHDC-201ENST00000301671 QRICH2Q9H0J4 1663 aa20.31■□□□□ 0.84
GHDC-201ENST00000301671 ITPRIPQ8IWB1 547 aa20.3■□□□□ 0.84
GHDC-201ENST00000301671 ABCA9Q8IUA7 1624 aa20.3■□□□□ 0.84
GHDC-201ENST00000301671 GZF1Q9H116 711 aaPredicted RBP20.3■□□□□ 0.84
GHDC-201ENST00000301671 NEURL4Q96JN8 1562 aa20.3■□□□□ 0.84
GHDC-201ENST00000301671 NPATQ14207 1427 aa20.3■□□□□ 0.84
GHDC-201ENST00000301671 TRIM27P14373 513 aa20.3■□□□□ 0.84
GHDC-201ENST00000301671 SSH1Q8WYL5 1049 aa20.3■□□□□ 0.84
GHDC-201ENST00000301671 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
GHDC-201ENST00000301671 PRKCSHP14314 528 aaPredicted RBP20.29■□□□□ 0.84
GHDC-201ENST00000301671 ADGRB3O60242 1522 aa20.28■□□□□ 0.84
GHDC-201ENST00000301671 EVC2Q86UK5 1308 aa20.28■□□□□ 0.84
GHDC-201ENST00000301671 ADGRB1O14514 1584 aa20.28■□□□□ 0.84
GHDC-201ENST00000301671 AAMPQ13685 434 aa20.28■□□□□ 0.84
GHDC-201ENST00000301671 C22orf23Q9BZE7 217 aa20.27■□□□□ 0.83
GHDC-201ENST00000301671 NOB1Q9ULX3 412 aaKnown RBP20.26■□□□□ 0.83
GHDC-201ENST00000301671 TRIM35Q9UPQ4 493 aa20.26■□□□□ 0.83
GHDC-201ENST00000301671 KIDINS220Q9ULH0 1771 aa20.26■□□□□ 0.83
GHDC-201ENST00000301671 TMPOP42166 694 aaKnown RBP20.26■□□□□ 0.83
GHDC-201ENST00000301671 SRPK2P78362 688 aaKnown RBP20.25■□□□□ 0.83
GHDC-201ENST00000301671 SETBP1Q9Y6X0 1596 aa20.25■□□□□ 0.83
GHDC-201ENST00000301671 TMEM57Q8N5G2 664 aa20.24■□□□□ 0.83
GHDC-201ENST00000301671 ANKRD36BQ8N2N9 1353 aa20.24■□□□□ 0.83
GHDC-201ENST00000301671 CD109Q6YHK3 1445 aa20.24■□□□□ 0.83
GHDC-201ENST00000301671 PLEKHF1Q96S99 279 aa20.23■□□□□ 0.83
GHDC-201ENST00000301671 ASXL2Q76L83 1435 aa20.23■□□□□ 0.83
GHDC-201ENST00000301671 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
GHDC-201ENST00000301671 ATF7IPQ6VMQ6 1270 aa20.22■□□□□ 0.83
GHDC-201ENST00000301671 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
GHDC-201ENST00000301671 TULP4Q9NRJ4 1543 aa20.22■□□□□ 0.83
GHDC-201ENST00000301671 RIPK4P57078 832 aa20.21■□□□□ 0.83
GHDC-201ENST00000301671 FBLN1P23142 703 aa20.21■□□□□ 0.83
GHDC-201ENST00000301671 A0A1W2PP64 1363 aa20.21■□□□□ 0.83
GHDC-201ENST00000301671 PPLO60437 1756 aa20.2■□□□□ 0.82
GHDC-201ENST00000301671 MCM4P33991 863 aa20.2■□□□□ 0.82
GHDC-201ENST00000301671 MINK1Q8N4C8 1332 aaPredicted RBP20.2■□□□□ 0.82
GHDC-201ENST00000301671 DDX19BQ9UMR2 479 aa20.2■□□□□ 0.82
GHDC-201ENST00000301671 LNPKQ9C0E8 428 aa20.19■□□□□ 0.82
GHDC-201ENST00000301671 RRAGDQ9NQL2 400 aaPredicted RBP20.19■□□□□ 0.82
GHDC-201ENST00000301671 LMTK2Q8IWU2 1503 aa20.18■□□□□ 0.82
GHDC-201ENST00000301671 VGFO15240 615 aaPredicted RBP20.18■□□□□ 0.82
GHDC-201ENST00000301671 HDAC1Q13547 482 aaPredicted RBP20.18■□□□□ 0.82
GHDC-201ENST00000301671 PANK2Q9BZ23 570 aa20.18■□□□□ 0.82
GHDC-201ENST00000301671 GLI2P10070 1586 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms