RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 HSP90AB4PQ58FF6 505 aa23.59■■□□□ 1.37
TSR1-201ENST00000301364 FAM184AQ8NB25 1140 aa23.59■■□□□ 1.37
TSR1-201ENST00000301364 ARID3AQ99856 593 aa23.59■■□□□ 1.37
TSR1-201ENST00000301364 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
TSR1-201ENST00000301364 GCC1Q96CN9 775 aa23.59■■□□□ 1.37
TSR1-201ENST00000301364 FRAT2O75474 233 aaPredicted RBP23.58■■□□□ 1.37
TSR1-201ENST00000301364 FOXD4L6Q3SYB3 417 aaPredicted RBP23.58■■□□□ 1.37
TSR1-201ENST00000301364 FOXD4L3Q6VB84 417 aaPredicted RBP23.58■■□□□ 1.37
TSR1-201ENST00000301364 EIF2S2P20042 333 aaKnown RBP23.57■■□□□ 1.36
TSR1-201ENST00000301364 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
TSR1-201ENST00000301364 IFIT2P09913 472 aaKnown RBP23.56■■□□□ 1.36
TSR1-201ENST00000301364 TRAK2O60296 914 aa23.56■■□□□ 1.36
TSR1-201ENST00000301364 SLFN5Q08AF3 891 aa23.56■■□□□ 1.36
TSR1-201ENST00000301364 RPRD2Q5VT52 1461 aaKnown RBP23.55■■□□□ 1.36
TSR1-201ENST00000301364 PRKAR2BP31323 418 aa23.55■■□□□ 1.36
TSR1-201ENST00000301364 GOLGA6L19H0YKK7 550 aa23.55■■□□□ 1.36
TSR1-201ENST00000301364 RNF20Q5VTR2 975 aa23.54■■□□□ 1.36
TSR1-201ENST00000301364 MCTP1Q6DN14 999 aa23.54■■□□□ 1.36
TSR1-201ENST00000301364 LRRFIP1Q32MZ4 808 aaKnown RBP23.54■■□□□ 1.36
TSR1-201ENST00000301364 DDX58O95786 925 aaKnown RBP23.53■■□□□ 1.36
TSR1-201ENST00000301364 FAM43AQ8N2R8 423 aa23.53■■□□□ 1.36
TSR1-201ENST00000301364 CAMSAP2Q08AD1 1489 aa23.52■■□□□ 1.36
TSR1-201ENST00000301364 MVPQ14764 893 aaKnown RBP23.52■■□□□ 1.36
TSR1-201ENST00000301364 BECN2A8MW95 431 aa23.52■■□□□ 1.36
TSR1-201ENST00000301364 ERC2O15083 957 aa23.51■■□□□ 1.35
TSR1-201ENST00000301364 ATF7IPQ6VMQ6 1270 aa23.51■■□□□ 1.35
TSR1-201ENST00000301364 NECTIN2Q92692 538 aa23.51■■□□□ 1.35
TSR1-201ENST00000301364 NOB1Q9ULX3 412 aaKnown RBP23.51■■□□□ 1.35
TSR1-201ENST00000301364 CCDC141Q6ZP82 1450 aa23.51■■□□□ 1.35
TSR1-201ENST00000301364 TULP1O00294 542 aaPredicted RBP23.51■■□□□ 1.35
TSR1-201ENST00000301364 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.51■■□□□ 1.35
TSR1-201ENST00000301364 TSR2Q969E8 191 aaKnown RBP23.5■■□□□ 1.35
TSR1-201ENST00000301364 SMC3Q9UQE7 1217 aa23.5■■□□□ 1.35
TSR1-201ENST00000301364 RPGRIP1LQ68CZ1 1315 aa23.5■■□□□ 1.35
TSR1-201ENST00000301364 TWISTNBQ3B726 338 aaPredicted RBP23.5■■□□□ 1.35
TSR1-201ENST00000301364 GNAI3P08754 354 aa23.5■■□□□ 1.35
TSR1-201ENST00000301364 RABEP1Q15276 862 aa23.5■■□□□ 1.35
TSR1-201ENST00000301364 G3BP1Q13283 466 aaKnown RBP eCLIP23.49■■□□□ 1.354e-6■■■□□ 19.2
TSR1-201ENST00000301364 CYB5RLQ6IPT4 315 aa23.48■■□□□ 1.35
TSR1-201ENST00000301364 MAGI1Q96QZ7 1491 aaPredicted RBP23.48■■□□□ 1.35
TSR1-201ENST00000301364 MCM2P49736 904 aa23.47■■□□□ 1.35
TSR1-201ENST00000301364 PRAM1Q96QH2 718 aa23.47■■□□□ 1.35
TSR1-201ENST00000301364 WWC1Q8IX03 1113 aa23.47■■□□□ 1.35
TSR1-201ENST00000301364 ZNF428Q96B54 188 aa23.47■■□□□ 1.35
TSR1-201ENST00000301364 SLC52A1Q9NWF4 448 aa23.47■■□□□ 1.35
TSR1-201ENST00000301364 NASPP49321 788 aaPredicted RBP23.47■■□□□ 1.35
TSR1-201ENST00000301364 TTC5Q8N0Z6 440 aa23.47■■□□□ 1.35
TSR1-201ENST00000301364 UBTFL1P0CB47 393 aaPredicted RBP23.46■■□□□ 1.35
TSR1-201ENST00000301364 ISY1Q9ULR0 285 aaKnown RBP23.46■■□□□ 1.35
TSR1-201ENST00000301364 MSH5O43196 834 aa23.46■■□□□ 1.35
TSR1-201ENST00000301364 MAPKBP1O60336 1514 aa23.45■■□□□ 1.35
TSR1-201ENST00000301364 CPLX2Q6PUV4 134 aaKnown RBP23.45■■□□□ 1.34
TSR1-201ENST00000301364 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
TSR1-201ENST00000301364 GAS2L2Q8NHY3 880 aa23.44■■□□□ 1.34
TSR1-201ENST00000301364 MBD3O95983 291 aa23.44■■□□□ 1.34
TSR1-201ENST00000301364 TOMM22Q9NS69 142 aa23.44■■□□□ 1.34
TSR1-201ENST00000301364 BRPF3Q9ULD4 1205 aa23.43■■□□□ 1.34
TSR1-201ENST00000301364 CCDC30Q5VVM6 783 aa23.43■■□□□ 1.34
TSR1-201ENST00000301364 VPS37CA5D8V6 355 aaPredicted RBP23.42■■□□□ 1.34
TSR1-201ENST00000301364 ARHGEF11O15085 1522 aa23.42■■□□□ 1.34
TSR1-201ENST00000301364 ATAD2Q6PL18 1390 aa23.41■■□□□ 1.34
TSR1-201ENST00000301364 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.41■■□□□ 1.34
TSR1-201ENST00000301364 PSME1Q06323 249 aa23.4■■□□□ 1.34
TSR1-201ENST00000301364 BICD2Q8TD16 824 aa23.4■■□□□ 1.34
TSR1-201ENST00000301364 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
TSR1-201ENST00000301364 CDK19Q9BWU1 502 aa23.39■■□□□ 1.33
TSR1-201ENST00000301364 CCDC9Q9Y3X0 531 aaKnown RBP23.39■■□□□ 1.33
TSR1-201ENST00000301364 NEK4P51957 841 aa23.39■■□□□ 1.33
TSR1-201ENST00000301364 CHD1LQ86WJ1 897 aa23.39■■□□□ 1.33
TSR1-201ENST00000301364 CWC22Q9HCG8 908 aaKnown RBP23.39■■□□□ 1.33
TSR1-201ENST00000301364 CABP1Q9NZU7 370 aa23.39■■□□□ 1.33
TSR1-201ENST00000301364 CIZ1Q9ULV3 898 aaPredicted RBP23.39■■□□□ 1.33
TSR1-201ENST00000301364 CNTROBQ8N137 903 aa23.38■■□□□ 1.33
TSR1-201ENST00000301364 RASSF8Q8NHQ8 419 aa23.38■■□□□ 1.33
TSR1-201ENST00000301364 FCHSD2O94868 740 aa23.38■■□□□ 1.33
TSR1-201ENST00000301364 ZNF692Q9BU19 519 aaPredicted RBP23.38■■□□□ 1.33
TSR1-201ENST00000301364 C1orf115Q9H7X2 142 aa23.38■■□□□ 1.33
TSR1-201ENST00000301364 NSD3Q9BZ95 1437 aa23.38■■□□□ 1.33
TSR1-201ENST00000301364 CCDC39Q9UFE4 941 aa23.37■■□□□ 1.33
TSR1-201ENST00000301364 NLRP6P59044 892 aa23.37■■□□□ 1.33
TSR1-201ENST00000301364 CLASRPQ8N2M8 674 aaKnown RBP23.37■■□□□ 1.33
TSR1-201ENST00000301364 GNAI2P04899 355 aa23.36■■□□□ 1.33
TSR1-201ENST00000301364 SYNE3Q6ZMZ3 975 aa23.36■■□□□ 1.33
TSR1-201ENST00000301364 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
TSR1-201ENST00000301364 K7ELQ4 463 aaPredicted RBP23.36■■□□□ 1.33
TSR1-201ENST00000301364 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
TSR1-201ENST00000301364 TPM3P06753 285 aa23.35■■□□□ 1.33
TSR1-201ENST00000301364 CAVIN1Q6NZI2 390 aaKnown RBP23.35■■□□□ 1.33
TSR1-201ENST00000301364 CPLX1O14810 134 aa23.35■■□□□ 1.33
TSR1-201ENST00000301364 SURF6O75683 361 aaKnown RBP23.35■■□□□ 1.33
TSR1-201ENST00000301364 SASS6Q6UVJ0 657 aa23.34■■□□□ 1.33
TSR1-201ENST00000301364 PSMA5P28066 241 aa23.34■■□□□ 1.33
TSR1-201ENST00000301364 TMPOP42166 694 aaKnown RBP23.34■■□□□ 1.33
TSR1-201ENST00000301364 CCT4P50991 539 aaKnown RBP23.34■■□□□ 1.33
TSR1-201ENST00000301364 LETM1O95202 739 aaPredicted RBP23.34■■□□□ 1.33
TSR1-201ENST00000301364 C20orf194Q5TEA3 1177 aa23.34■■□□□ 1.33
TSR1-201ENST00000301364 MCM4P33991 863 aa23.33■■□□□ 1.33
TSR1-201ENST00000301364 AKAP17AQ02040 695 aaKnown RBP23.33■■□□□ 1.33
TSR1-201ENST00000301364 CCDC173Q0VFZ6 552 aa23.33■■□□□ 1.33
TSR1-201ENST00000301364 IL27Q8NEV9 243 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms