RNA–Protein interactions for RNA: ENST00000300880.11

BBC3-201, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-201ENST00000300880 ROCK1Q13464 1354 aa26.84■■□□□ 1.89
BBC3-201ENST00000300880 BRWD3Q6RI45 1802 aa26.84■■□□□ 1.89
BBC3-201ENST00000300880 ROBO2Q9HCK4 1378 aa26.83■■□□□ 1.89
BBC3-201ENST00000300880 CCDC125Q86Z20 511 aa26.81■■□□□ 1.88
BBC3-201ENST00000300880 FOXD1Q16676 465 aa26.8■■□□□ 1.88
BBC3-201ENST00000300880 KIF1BO60333 1816 aa26.78■■□□□ 1.88
BBC3-201ENST00000300880 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.78■■□□□ 1.88
BBC3-201ENST00000300880 GLI3P10071 1580 aa26.77■■□□□ 1.88
BBC3-201ENST00000300880 PXDNQ92626 1479 aa26.77■■□□□ 1.88
BBC3-201ENST00000300880 GJD4Q96KN9 370 aaPredicted RBP26.76■■□□□ 1.87
BBC3-201ENST00000300880 DEFB132Q7Z7B7 95 aa26.74■■□□□ 1.87
BBC3-201ENST00000300880 XPCQ01831 940 aaPredicted RBP26.72■■□□□ 1.87
BBC3-201ENST00000300880 LRP5O75197 1615 aa26.71■■□□□ 1.87
BBC3-201ENST00000300880 BLMP54132 1417 aaPredicted RBP26.71■■□□□ 1.87
BBC3-201ENST00000300880 PRAG1Q86YV5 1406 aa26.71■■□□□ 1.87
BBC3-201ENST00000300880 RALGAPBQ86X10 1494 aa26.7■■□□□ 1.86
BBC3-201ENST00000300880 ESCO1Q5FWF5 840 aa26.67■■□□□ 1.86
BBC3-201ENST00000300880 ITGAEP38570 1179 aa26.66■■□□□ 1.86
BBC3-201ENST00000300880 SLIT2O94813 1529 aa26.66■■□□□ 1.86
BBC3-201ENST00000300880 NPHP3Q7Z494 1330 aa26.66■■□□□ 1.86
BBC3-201ENST00000300880 CDC42BPGQ6DT37 1551 aa26.66■■□□□ 1.86
BBC3-201ENST00000300880 FOXO3O43524 673 aa26.65■■□□□ 1.86
BBC3-201ENST00000300880 HFM1A2PYH4 1435 aa26.64■■□□□ 1.85
BBC3-201ENST00000300880 PPLO60437 1756 aa26.63■■□□□ 1.85
BBC3-201ENST00000300880 UNC5CLQ8IV45 518 aa26.63■■□□□ 1.85
BBC3-201ENST00000300880 USP32Q8NFA0 1604 aa26.59■■□□□ 1.85
BBC3-201ENST00000300880 VGFO15240 615 aaPredicted RBP26.59■■□□□ 1.85
BBC3-201ENST00000300880 NUTM2FA1L443 756 aa26.58■■□□□ 1.85
BBC3-201ENST00000300880 SEPT12Q8IYM1 358 aa26.57■■□□□ 1.84
BBC3-201ENST00000300880 NAIPQ13075 1403 aa26.56■■□□□ 1.84
BBC3-201ENST00000300880 PLCH1Q4KWH8 1693 aa26.56■■□□□ 1.84
BBC3-201ENST00000300880 RGPD8O14715 1765 aaPredicted RBP26.55■■□□□ 1.84
BBC3-201ENST00000300880 PSDA5PKW4 1024 aaPredicted RBP26.55■■□□□ 1.84
BBC3-201ENST00000300880 FMN2Q9NZ56 1722 aa26.53■■□□□ 1.84
BBC3-201ENST00000300880 SPATA31A3Q5VYP0 1347 aa26.53■■□□□ 1.84
BBC3-201ENST00000300880 WAPLQ7Z5K2 1190 aa26.52■■□□□ 1.84
BBC3-201ENST00000300880 ABCA3Q99758 1704 aa26.51■■□□□ 1.83
BBC3-201ENST00000300880 NWD2Q9ULI1 1742 aa26.51■■□□□ 1.83
BBC3-201ENST00000300880 SF3B2Q13435 895 aaKnown RBP26.5■■□□□ 1.83
BBC3-201ENST00000300880 LRPPRCP42704 1394 aaKnown RBP26.49■■□□□ 1.83
BBC3-201ENST00000300880 ONECUT3O60422 494 aaPredicted RBP26.49■■□□□ 1.83
BBC3-201ENST00000300880 HRCP23327 699 aa26.49■■□□□ 1.83
BBC3-201ENST00000300880 PLEKHH1Q9ULM0 1364 aa26.48■■□□□ 1.83
BBC3-201ENST00000300880 VPS72Q15906 364 aa26.48■■□□□ 1.83
BBC3-201ENST00000300880 KIF1AQ12756 1690 aa26.48■■□□□ 1.83
BBC3-201ENST00000300880 RPGRIP1LQ68CZ1 1315 aa26.47■■□□□ 1.83
BBC3-201ENST00000300880 CABLES1Q8TDN4 633 aa26.47■■□□□ 1.83
BBC3-201ENST00000300880 KRT27Q7Z3Y8 459 aa26.45■■□□□ 1.83
BBC3-201ENST00000300880 STK26Q9P289 416 aa26.45■■□□□ 1.83
BBC3-201ENST00000300880 KNDC1Q76NI1 1749 aa26.44■■□□□ 1.82
BBC3-201ENST00000300880 KRT28Q7Z3Y7 464 aa26.44■■□□□ 1.82
BBC3-201ENST00000300880 TECPR2O15040 1411 aa26.44■■□□□ 1.82
BBC3-201ENST00000300880 ADGRF5Q8IZF2 1346 aa26.44■■□□□ 1.82
BBC3-201ENST00000300880 PLEKHG5O94827 1062 aa26.42■■□□□ 1.82
BBC3-201ENST00000300880 NRAPQ86VF7 1730 aa26.42■■□□□ 1.82
BBC3-201ENST00000300880 IFT172Q9UG01 1749 aa26.42■■□□□ 1.82
BBC3-201ENST00000300880 CCDC144AA2RUR9 1427 aa26.41■■□□□ 1.82
BBC3-201ENST00000300880 CCDC9Q9Y3X0 531 aaKnown RBP26.39■■□□□ 1.82
BBC3-201ENST00000300880 TNS3Q68CZ2 1445 aa26.39■■□□□ 1.81
BBC3-201ENST00000300880 RGPD1P0DJD0 1748 aa26.38■■□□□ 1.81
BBC3-201ENST00000300880 BAG6P46379 1132 aa26.38■■□□□ 1.81
BBC3-201ENST00000300880 EN1Q05925 392 aaPredicted RBP26.37■■□□□ 1.81
BBC3-201ENST00000300880 TMEM132EQ6IEE7 984 aa26.37■■□□□ 1.81
BBC3-201ENST00000300880 TNS1Q9HBL0 1735 aaKnown RBP26.36■■□□□ 1.81
BBC3-201ENST00000300880 FAM83GA6ND36 823 aa26.36■■□□□ 1.81
BBC3-201ENST00000300880 ABCC11Q96J66 1382 aa26.35■■□□□ 1.81
BBC3-201ENST00000300880 HAP1P54257 671 aaPredicted RBP26.35■■□□□ 1.81
BBC3-201ENST00000300880 FAM182BQ5T319 152 aa26.35■■□□□ 1.81
BBC3-201ENST00000300880 R3HDM1Q15032 1099 aaKnown RBP26.33■■□□□ 1.81
BBC3-201ENST00000300880 FAM98CQ17RN3 349 aaKnown RBP26.33■■□□□ 1.81
BBC3-201ENST00000300880 PHF8Q9UPP1 1060 aa26.31■■□□□ 1.8
BBC3-201ENST00000300880 A0A0G2JS52 829 aa26.29■■□□□ 1.8
BBC3-201ENST00000300880 MYT1Q01538 1121 aa26.29■■□□□ 1.8
BBC3-201ENST00000300880 SBNO1A3KN83 1393 aa26.29■■□□□ 1.8
BBC3-201ENST00000300880 NRXN1Q9ULB1 1477 aa26.28■■□□□ 1.8
BBC3-201ENST00000300880 YTHDC2Q9H6S0 1430 aaKnown RBP26.28■■□□□ 1.8
BBC3-201ENST00000300880 TRPM3Q9HCF6 1732 aaPredicted RBP26.27■■□□□ 1.8
BBC3-201ENST00000300880 PSME1Q06323 249 aa26.27■■□□□ 1.8
BBC3-201ENST00000300880 LMOD2Q6P5Q4 547 aa26.27■■□□□ 1.8
BBC3-201ENST00000300880 RGL3Q3MIN7 710 aa26.26■■□□□ 1.79
BBC3-201ENST00000300880 SLC4A1APQ9BWU0 796 aaKnown RBP26.26■■□□□ 1.79
BBC3-201ENST00000300880 SPATA31E1Q6ZUB1 1445 aa26.26■■□□□ 1.79
BBC3-201ENST00000300880 THSD7AQ9UPZ6 1657 aa26.26■■□□□ 1.79
BBC3-201ENST00000300880 COL14A1Q05707 1796 aaKnown RBP26.25■■□□□ 1.79
BBC3-201ENST00000300880 DISP2A7MBM2 1401 aa26.24■■□□□ 1.79
BBC3-201ENST00000300880 PIK3C2GO75747 1445 aa26.24■■□□□ 1.79
BBC3-201ENST00000300880 EZH2Q15910 746 aaKnown RBP26.24■■□□□ 1.79
BBC3-201ENST00000300880 BTG4Q9NY30 223 aa26.24■■□□□ 1.79
BBC3-201ENST00000300880 ARHGEF10O15013 1369 aa26.23■■□□□ 1.79
BBC3-201ENST00000300880 RAB3GAP2Q9H2M9 1393 aa26.23■■□□□ 1.79
BBC3-201ENST00000300880 ALS2Q96Q42 1657 aa26.23■■□□□ 1.79
BBC3-201ENST00000300880 CRYBG1Q9Y4K1 1723 aa26.22■■□□□ 1.79
BBC3-201ENST00000300880 PMFBP1Q8TBY8 1022 aa26.19■■□□□ 1.78
BBC3-201ENST00000300880 ANKRD30BQ9BXX2 1392 aa26.19■■□□□ 1.78
BBC3-201ENST00000300880 SPATA31A5Q5VU36 1347 aa26.19■■□□□ 1.78
BBC3-201ENST00000300880 SPATA31A7Q8IWB4 1347 aa26.19■■□□□ 1.78
BBC3-201ENST00000300880 SIRT1Q96EB6 747 aa26.18■■□□□ 1.78
BBC3-201ENST00000300880 CAMKK2Q96RR4 588 aa26.17■■□□□ 1.78
BBC3-201ENST00000300880 RREB1Q92766 1687 aa26.16■■□□□ 1.78
BBC3-201ENST00000300880 SAFB2Q14151 953 aaKnown RBP eCLIP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms