RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 NEO1Q92859 1461 aa17.65■□□□□ 0.42
CDH8-201ENST00000299345 BCAR3O75815 825 aa17.64■□□□□ 0.42
CDH8-201ENST00000299345 BACH2Q9BYV9 841 aa17.64■□□□□ 0.41
CDH8-201ENST00000299345 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
CDH8-201ENST00000299345 POLR3AO14802 1390 aaPredicted RBP17.64■□□□□ 0.41
CDH8-201ENST00000299345 ADGRB3O60242 1522 aa17.64■□□□□ 0.41
CDH8-201ENST00000299345 RGS3P49796 1198 aa17.63■□□□□ 0.41
CDH8-201ENST00000299345 FAM69CQ0P6D2 419 aa17.63■□□□□ 0.41
CDH8-201ENST00000299345 TCP11L2Q8N4U5 519 aa17.63■□□□□ 0.41
CDH8-201ENST00000299345 SKAP1Q86WV1 359 aa17.63■□□□□ 0.41
CDH8-201ENST00000299345 WWC1Q8IX03 1113 aa17.63■□□□□ 0.41
CDH8-201ENST00000299345 MINK1Q8N4C8 1332 aaPredicted RBP17.63■□□□□ 0.41
CDH8-201ENST00000299345 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
CDH8-201ENST00000299345 NKTRP30414 1462 aaKnown RBP17.62■□□□□ 0.41
CDH8-201ENST00000299345 ABCC3O15438 1527 aa17.62■□□□□ 0.41
CDH8-201ENST00000299345 NRXN1Q9ULB1 1477 aa17.62■□□□□ 0.41
CDH8-201ENST00000299345 TERF2IPQ9NYB0 399 aa17.61■□□□□ 0.41
CDH8-201ENST00000299345 MLECQ14165 292 aa17.6■□□□□ 0.41
CDH8-201ENST00000299345 ESF1Q9H501 851 aaKnown RBP17.6■□□□□ 0.41
CDH8-201ENST00000299345 PRAM1Q96QH2 718 aa17.59■□□□□ 0.41
CDH8-201ENST00000299345 TRMT2AQ8IZ69 625 aaKnown RBP17.58■□□□□ 0.41
CDH8-201ENST00000299345 PUS7Q96PZ0 661 aaKnown RBP17.58■□□□□ 0.41
CDH8-201ENST00000299345 GGNBP2Q9H3C7 697 aa17.58■□□□□ 0.41
CDH8-201ENST00000299345 MROH2AA6NES4 1674 aa17.58■□□□□ 0.41
CDH8-201ENST00000299345 FBXO31Q5XUX0 539 aaPredicted RBP17.58■□□□□ 0.4
CDH8-201ENST00000299345 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.4
CDH8-201ENST00000299345 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
CDH8-201ENST00000299345 FRMPD1Q5SYB0 1578 aa17.58■□□□□ 0.4
CDH8-201ENST00000299345 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
CDH8-201ENST00000299345 MAPK8IP3Q9UPT6 1336 aa17.57■□□□□ 0.4
CDH8-201ENST00000299345 DDRGK1Q96HY6 314 aa17.57■□□□□ 0.4
CDH8-201ENST00000299345 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
CDH8-201ENST00000299345 COG6Q9Y2V7 657 aa17.57■□□□□ 0.4
CDH8-201ENST00000299345 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
CDH8-201ENST00000299345 MYOM1P52179 1685 aa17.56■□□□□ 0.4
CDH8-201ENST00000299345 YEATS2Q9ULM3 1422 aa17.56■□□□□ 0.4
CDH8-201ENST00000299345 NEFMP07197 916 aa17.55■□□□□ 0.4
CDH8-201ENST00000299345 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
CDH8-201ENST00000299345 PANK1Q8TE04 598 aa17.54■□□□□ 0.4
CDH8-201ENST00000299345 BCL2L13Q9BXK5 485 aa17.54■□□□□ 0.4
CDH8-201ENST00000299345 PPM1GO15355 546 aaPredicted RBP17.54■□□□□ 0.4
CDH8-201ENST00000299345 WDR63Q8IWG1 891 aa17.54■□□□□ 0.4
CDH8-201ENST00000299345 NSD2O96028 1365 aa17.53■□□□□ 0.4
CDH8-201ENST00000299345 FAM161AQ3B820 660 aa17.52■□□□□ 0.4
CDH8-201ENST00000299345 KDM2BQ8NHM5 1336 aa17.52■□□□□ 0.4
CDH8-201ENST00000299345 ATAD2Q6PL18 1390 aa17.52■□□□□ 0.39
CDH8-201ENST00000299345 LAS1LQ9Y4W2 734 aaKnown RBP17.51■□□□□ 0.39
CDH8-201ENST00000299345 ADGRB1O14514 1584 aa17.51■□□□□ 0.39
CDH8-201ENST00000299345 ARHGAP31Q2M1Z3 1444 aa17.51■□□□□ 0.39
CDH8-201ENST00000299345 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
CDH8-201ENST00000299345 FTSJ3Q8IY81 847 aaKnown RBP17.49■□□□□ 0.39
CDH8-201ENST00000299345 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
CDH8-201ENST00000299345 IFT172Q9UG01 1749 aa17.49■□□□□ 0.39
CDH8-201ENST00000299345 CAMSAP1Q5T5Y3 1602 aa17.49■□□□□ 0.39
CDH8-201ENST00000299345 QRICH2Q9H0J4 1663 aa17.49■□□□□ 0.39
CDH8-201ENST00000299345 DIP2CQ9Y2E4 1556 aa17.48■□□□□ 0.39
CDH8-201ENST00000299345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.48■□□□□ 0.39
CDH8-201ENST00000299345 NINLQ9Y2I6 1382 aa17.48■□□□□ 0.39
CDH8-201ENST00000299345 RARSP54136 660 aaKnown RBP17.48■□□□□ 0.39
CDH8-201ENST00000299345 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
CDH8-201ENST00000299345 CABP1Q9NZU7 370 aa17.48■□□□□ 0.39
CDH8-201ENST00000299345 PPLO60437 1756 aa17.48■□□□□ 0.39
CDH8-201ENST00000299345 A0A1W2PP64 1363 aa17.48■□□□□ 0.39
CDH8-201ENST00000299345 MYO3AQ8NEV4 1616 aa17.48■□□□□ 0.39
CDH8-201ENST00000299345 GLI2P10070 1586 aa17.47■□□□□ 0.39
CDH8-201ENST00000299345 DIAPH1O60610 1272 aaKnown RBP17.46■□□□□ 0.39
CDH8-201ENST00000299345 DEKP35659 375 aaKnown RBP17.46■□□□□ 0.39
CDH8-201ENST00000299345 CCDC27Q2M243 656 aa17.45■□□□□ 0.38
CDH8-201ENST00000299345 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
CDH8-201ENST00000299345 FYB1O15117 783 aa17.45■□□□□ 0.38
CDH8-201ENST00000299345 ZFYVE9O95405 1425 aa17.44■□□□□ 0.38
CDH8-201ENST00000299345 YTHDC2Q9H6S0 1430 aaKnown RBP17.44■□□□□ 0.38
CDH8-201ENST00000299345 SMC4Q9NTJ3 1288 aa17.44■□□□□ 0.38
CDH8-201ENST00000299345 NEXMIFQ5QGS0 1516 aa17.44■□□□□ 0.38
CDH8-201ENST00000299345 TSR2Q969E8 191 aaKnown RBP17.43■□□□□ 0.38
CDH8-201ENST00000299345 IGHDP01880 384 aa17.43■□□□□ 0.38
CDH8-201ENST00000299345 WAPLQ7Z5K2 1190 aa17.43■□□□□ 0.38
CDH8-201ENST00000299345 RIPK4P57078 832 aa17.43■□□□□ 0.38
CDH8-201ENST00000299345 ZKSCAN2Q63HK3 967 aa17.43■□□□□ 0.38
CDH8-201ENST00000299345 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
CDH8-201ENST00000299345 ABCC11Q96J66 1382 aa17.42■□□□□ 0.38
CDH8-201ENST00000299345 TULP4Q9NRJ4 1543 aa17.42■□□□□ 0.38
CDH8-201ENST00000299345 TMPOP42166 694 aaKnown RBP17.42■□□□□ 0.38
CDH8-201ENST00000299345 RWDD1Q9H446 243 aaPredicted RBP17.42■□□□□ 0.38
CDH8-201ENST00000299345 HDGFP51858 240 aaKnown RBP17.41■□□□□ 0.38
CDH8-201ENST00000299345 AAMPQ13685 434 aa17.41■□□□□ 0.38
CDH8-201ENST00000299345 EXOSC9Q06265 439 aaKnown RBP17.4■□□□□ 0.38
CDH8-201ENST00000299345 SLC4A3P48751 1232 aa17.39■□□□□ 0.37
CDH8-201ENST00000299345 DZIP1LQ8IYY4 767 aaKnown RBP17.39■□□□□ 0.37
CDH8-201ENST00000299345 UPF2Q9HAU5 1272 aaKnown RBP17.39■□□□□ 0.37
CDH8-201ENST00000299345 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
CDH8-201ENST00000299345 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDH8-201ENST00000299345 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
CDH8-201ENST00000299345 TNNQ9UQP3 1299 aa17.37■□□□□ 0.37
CDH8-201ENST00000299345 PIK3C2BO00750 1634 aa17.37■□□□□ 0.37
CDH8-201ENST00000299345 SIGLEC1Q9BZZ2 1709 aa17.37■□□□□ 0.37
CDH8-201ENST00000299345 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
CDH8-201ENST00000299345 ITPRIPQ8IWB1 547 aa17.37■□□□□ 0.37
CDH8-201ENST00000299345 RLBP1P12271 317 aa17.36■□□□□ 0.37
CDH8-201ENST00000299345 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms