RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 EMILIN1Q9Y6C2 1016 aa12.87□□□□□ -0.35
GABRB3-201ENST00000299267 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
GABRB3-201ENST00000299267 ABCC10Q5T3U5 1492 aa12.87□□□□□ -0.35
GABRB3-201ENST00000299267 DUOX2Q9NRD8 1548 aa12.87□□□□□ -0.35
GABRB3-201ENST00000299267 FAM135AQ9P2D6 1515 aa12.87□□□□□ -0.35
GABRB3-201ENST00000299267 CFAP43Q8NDM7 1665 aa12.87□□□□□ -0.35
GABRB3-201ENST00000299267 KCNJ4P48050 445 aa12.86□□□□□ -0.35
GABRB3-201ENST00000299267 ZKSCAN2Q63HK3 967 aa12.86□□□□□ -0.35
GABRB3-201ENST00000299267 TTC5Q8N0Z6 440 aa12.85□□□□□ -0.35
GABRB3-201ENST00000299267 ITSN2Q9NZM3 1697 aa12.85□□□□□ -0.35
GABRB3-201ENST00000299267 CASC1Q6TDU7 716 aa12.85□□□□□ -0.35
GABRB3-201ENST00000299267 TEX14Q8IWB6 1497 aa12.85□□□□□ -0.35
GABRB3-201ENST00000299267 ATAD2Q6PL18 1390 aa12.85□□□□□ -0.35
GABRB3-201ENST00000299267 AIMP1Q12904 312 aaKnown RBP12.85□□□□□ -0.35
GABRB3-201ENST00000299267 EXOSC9Q06265 439 aaKnown RBP12.84□□□□□ -0.35
GABRB3-201ENST00000299267 FKBP5Q13451 457 aaPredicted RBP12.84□□□□□ -0.35
GABRB3-201ENST00000299267 ZMYM3Q14202 1370 aa12.84□□□□□ -0.35
GABRB3-201ENST00000299267 MEX3CQ5U5Q3 659 aaKnown RBP12.84□□□□□ -0.35
GABRB3-201ENST00000299267 PRDM11Q9NQV5 511 aa12.84□□□□□ -0.35
GABRB3-201ENST00000299267 RBM19Q9Y4C8 960 aaKnown RBP12.84□□□□□ -0.35
GABRB3-201ENST00000299267 USHBP1Q8N6Y0 703 aa12.84□□□□□ -0.35
GABRB3-201ENST00000299267 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
GABRB3-201ENST00000299267 DDX54Q8TDD1 881 aaKnown RBP12.84□□□□□ -0.35
GABRB3-201ENST00000299267 DCTN1Q14203 1278 aa12.83□□□□□ -0.36
GABRB3-201ENST00000299267 BCAR3O75815 825 aa12.83□□□□□ -0.36
GABRB3-201ENST00000299267 BECN1Q14457 450 aa12.83□□□□□ -0.36
GABRB3-201ENST00000299267 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
GABRB3-201ENST00000299267 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
GABRB3-201ENST00000299267 GTF2E1P29083 439 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-201ENST00000299267 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
GABRB3-201ENST00000299267 PZPP20742 1482 aa12.82□□□□□ -0.36
GABRB3-201ENST00000299267 CHD1O14646 1710 aa12.82□□□□□ -0.36
GABRB3-201ENST00000299267 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-201ENST00000299267 GNAI1P63096 354 aa12.82□□□□□ -0.36
GABRB3-201ENST00000299267 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
GABRB3-201ENST00000299267 YEATS2Q9ULM3 1422 aa12.82□□□□□ -0.36
GABRB3-201ENST00000299267 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
GABRB3-201ENST00000299267 UHRF1BP1LA0JNW5 1464 aa12.8□□□□□ -0.36
GABRB3-201ENST00000299267 TAF7LQ5H9L4 462 aa12.8□□□□□ -0.36
GABRB3-201ENST00000299267 ANKRD45Q5TZF3 282 aa12.8□□□□□ -0.36
GABRB3-201ENST00000299267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.8□□□□□ -0.36
GABRB3-201ENST00000299267 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
GABRB3-201ENST00000299267 FGD1P98174 961 aa12.8□□□□□ -0.36
GABRB3-201ENST00000299267 TESK2Q96S53 571 aa12.8□□□□□ -0.36
GABRB3-201ENST00000299267 SCAF11Q99590 1463 aaKnown RBP12.79□□□□□ -0.36
GABRB3-201ENST00000299267 ACEP12821 1306 aa12.79□□□□□ -0.36
GABRB3-201ENST00000299267 MSH5O43196 834 aa12.79□□□□□ -0.36
GABRB3-201ENST00000299267 KCNA6P17658 529 aa12.78□□□□□ -0.36
GABRB3-201ENST00000299267 MFAP1P55081 439 aaKnown RBP12.78□□□□□ -0.36
GABRB3-201ENST00000299267 ZNF530Q6P9A1 599 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-201ENST00000299267 ERICH6BQ5W0A0 696 aa12.78□□□□□ -0.36
GABRB3-201ENST00000299267 C9orf78Q9NZ63 289 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-201ENST00000299267 PRAG1Q86YV5 1406 aa12.78□□□□□ -0.36
GABRB3-201ENST00000299267 ADAMTS2O95450 1211 aa12.78□□□□□ -0.36
GABRB3-201ENST00000299267 DDRGK1Q96HY6 314 aa12.78□□□□□ -0.36
GABRB3-201ENST00000299267 ABCA8O94911 1581 aa12.77□□□□□ -0.36
GABRB3-201ENST00000299267 GORABQ5T7V8 394 aa12.77□□□□□ -0.36
GABRB3-201ENST00000299267 MCM10Q7L590 875 aa12.77□□□□□ -0.36
GABRB3-201ENST00000299267 MBD5Q9P267 1494 aa12.77□□□□□ -0.37
GABRB3-201ENST00000299267 RIMS2Q9UQ26 1411 aa12.77□□□□□ -0.37
GABRB3-201ENST00000299267 HMMRO75330 724 aa12.77□□□□□ -0.37
GABRB3-201ENST00000299267 DNMT1P26358 1616 aaKnown RBP12.77□□□□□ -0.37
GABRB3-201ENST00000299267 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
GABRB3-201ENST00000299267 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
GABRB3-201ENST00000299267 TWISTNBQ3B726 338 aaPredicted RBP12.76□□□□□ -0.37
GABRB3-201ENST00000299267 TSHZ2Q9NRE2 1034 aa12.76□□□□□ -0.37
GABRB3-201ENST00000299267 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
GABRB3-201ENST00000299267 FYB1O15117 783 aa12.75□□□□□ -0.37
GABRB3-201ENST00000299267 NCLP19338 710 aaKnown RBP12.75□□□□□ -0.37
GABRB3-201ENST00000299267 ATP7AQ04656 1500 aa12.75□□□□□ -0.37
GABRB3-201ENST00000299267 TMPOP42166 694 aaKnown RBP12.75□□□□□ -0.37
GABRB3-201ENST00000299267 PLEKHO1Q53GL0 409 aaPredicted RBP12.75□□□□□ -0.37
GABRB3-201ENST00000299267 GAS2L2Q8NHY3 880 aa12.75□□□□□ -0.37
GABRB3-201ENST00000299267 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
GABRB3-201ENST00000299267 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
GABRB3-201ENST00000299267 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
GABRB3-201ENST00000299267 HSP90AB1P08238 724 aaKnown RBP12.74□□□□□ -0.37
GABRB3-201ENST00000299267 TATP17735 454 aaPredicted RBP12.74□□□□□ -0.37
GABRB3-201ENST00000299267 KRT28Q7Z3Y7 464 aa12.74□□□□□ -0.37
GABRB3-201ENST00000299267 CABLES1Q8TDN4 633 aa12.74□□□□□ -0.37
GABRB3-201ENST00000299267 CARD14Q9BXL6 1004 aa12.74□□□□□ -0.37
GABRB3-201ENST00000299267 SHANK2Q9UPX8 1470 aa12.74□□□□□ -0.37
GABRB3-201ENST00000299267 HSP90AB2PQ58FF8 381 aa12.74□□□□□ -0.37
GABRB3-201ENST00000299267 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
GABRB3-201ENST00000299267 NEXNQ0ZGT2 675 aa12.73□□□□□ -0.37
GABRB3-201ENST00000299267 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
GABRB3-201ENST00000299267 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-201ENST00000299267 KAT6BQ8WYB5 2073 aa12.72□□□□□ -0.37
GABRB3-201ENST00000299267 LTKP29376 864 aa12.72□□□□□ -0.37
GABRB3-201ENST00000299267 API5Q9BZZ5 524 aaKnown RBP12.72□□□□□ -0.37
GABRB3-201ENST00000299267 SLKQ9H2G2 1235 aaPredicted RBP12.72□□□□□ -0.37
GABRB3-201ENST00000299267 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
GABRB3-201ENST00000299267 FCHSD2O94868 740 aa12.72□□□□□ -0.37
GABRB3-201ENST00000299267 NOL8Q76FK4 1167 aaKnown RBP12.72□□□□□ -0.37
GABRB3-201ENST00000299267 RIC3Q7Z5B4 369 aa12.72□□□□□ -0.37
GABRB3-201ENST00000299267 RILPL2Q969X0 211 aa12.72□□□□□ -0.37
GABRB3-201ENST00000299267 ATP10AO60312 1499 aa12.72□□□□□ -0.37
GABRB3-201ENST00000299267 NOB1Q9ULX3 412 aaKnown RBP12.71□□□□□ -0.37
GABRB3-201ENST00000299267 FAM83GA6ND36 823 aa12.71□□□□□ -0.37
GABRB3-201ENST00000299267 TSPOAP1O95153 1857 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms