RNA–Protein interactions for RNA: ENST00000297596.2

GEM-201, Transcript of GTP binding protein overexpressed in skeletal muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GEM, Length 2,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEM-201ENST00000297596 RARSP54136 660 aaKnown RBP17.71■□□□□ 0.43
GEM-201ENST00000297596 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
GEM-201ENST00000297596 NOS1P29475 1434 aa17.71■□□□□ 0.43
GEM-201ENST00000297596 AAMPQ13685 434 aa17.71■□□□□ 0.43
GEM-201ENST00000297596 SEC24BO95487 1268 aa17.7■□□□□ 0.42
GEM-201ENST00000297596 NEUROD2Q15784 382 aa17.7■□□□□ 0.42
GEM-201ENST00000297596 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
GEM-201ENST00000297596 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
GEM-201ENST00000297596 IQSEC2Q5JU85 1478 aa17.7■□□□□ 0.42
GEM-201ENST00000297596 ZC3H13Q5T200 1668 aaKnown RBP17.7■□□□□ 0.42
GEM-201ENST00000297596 WDR63Q8IWG1 891 aa17.7■□□□□ 0.42
GEM-201ENST00000297596 SLC12A5Q9H2X9 1139 aa17.7■□□□□ 0.42
GEM-201ENST00000297596 RRP7AQ9Y3A4 280 aaKnown RBP17.7■□□□□ 0.42
GEM-201ENST00000297596 TNNT2P45379 298 aaPredicted RBP17.69■□□□□ 0.42
GEM-201ENST00000297596 PMFBP1Q8TBY8 1022 aa17.69■□□□□ 0.42
GEM-201ENST00000297596 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
GEM-201ENST00000297596 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
GEM-201ENST00000297596 TRAK1Q9UPV9 953 aa17.68■□□□□ 0.42
GEM-201ENST00000297596 QRICH2Q9H0J4 1663 aa17.67■□□□□ 0.42
GEM-201ENST00000297596 C14orf93Q9H972 538 aaKnown RBP17.67■□□□□ 0.42
GEM-201ENST00000297596 KIDINS220Q9ULH0 1771 aa17.67■□□□□ 0.42
GEM-201ENST00000297596 CCDC27Q2M243 656 aa17.66■□□□□ 0.42
GEM-201ENST00000297596 PCDHB15Q9Y5E8 787 aa17.66■□□□□ 0.42
GEM-201ENST00000297596 USP32Q8NFA0 1604 aa17.66■□□□□ 0.42
GEM-201ENST00000297596 CHGAP10645 457 aaKnown RBP17.66■□□□□ 0.42
GEM-201ENST00000297596 RLBP1P12271 317 aa17.66■□□□□ 0.42
GEM-201ENST00000297596 NLRP1Q9C000 1473 aa17.65■□□□□ 0.42
GEM-201ENST00000297596 PPLO60437 1756 aa17.65■□□□□ 0.42
GEM-201ENST00000297596 MTHFSP49914 203 aa17.65■□□□□ 0.42
GEM-201ENST00000297596 BECN1Q14457 450 aa17.65■□□□□ 0.42
GEM-201ENST00000297596 ZNF518AQ6AHZ1 1483 aa17.65■□□□□ 0.42
GEM-201ENST00000297596 ADGRB1O14514 1584 aa17.64■□□□□ 0.41
GEM-201ENST00000297596 ZMYM3Q14202 1370 aa17.64■□□□□ 0.41
GEM-201ENST00000297596 TNNQ9UQP3 1299 aa17.64■□□□□ 0.41
GEM-201ENST00000297596 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
GEM-201ENST00000297596 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
GEM-201ENST00000297596 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
GEM-201ENST00000297596 TMEM132EQ6IEE7 984 aa17.62■□□□□ 0.41
GEM-201ENST00000297596 PDZRN3Q9UPQ7 1066 aa17.62■□□□□ 0.41
GEM-201ENST00000297596 CFAP65Q6ZU64 1925 aaKnown RBP17.61■□□□□ 0.41
GEM-201ENST00000297596 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
GEM-201ENST00000297596 RWDD1Q9H446 243 aaPredicted RBP17.6■□□□□ 0.41
GEM-201ENST00000297596 MYH16Q9H6N6 1097 aa17.6■□□□□ 0.41
GEM-201ENST00000297596 PUS7Q96PZ0 661 aaKnown RBP17.59■□□□□ 0.41
GEM-201ENST00000297596 NPATQ14207 1427 aa17.59■□□□□ 0.41
GEM-201ENST00000297596 RPGRIP1LQ68CZ1 1315 aa17.59■□□□□ 0.41
GEM-201ENST00000297596 TBC1D32Q96NH3 1257 aa17.59■□□□□ 0.41
GEM-201ENST00000297596 UPF2Q9HAU5 1272 aaKnown RBP17.59■□□□□ 0.41
GEM-201ENST00000297596 NSD2O96028 1365 aa17.57■□□□□ 0.4
GEM-201ENST00000297596 MVPQ14764 893 aaKnown RBP17.57■□□□□ 0.4
GEM-201ENST00000297596 ASXL2Q76L83 1435 aa17.57■□□□□ 0.4
GEM-201ENST00000297596 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
GEM-201ENST00000297596 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
GEM-201ENST00000297596 ANTXR1Q9H6X2 564 aa17.56■□□□□ 0.4
GEM-201ENST00000297596 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
GEM-201ENST00000297596 SLKQ9H2G2 1235 aaPredicted RBP17.56■□□□□ 0.4
GEM-201ENST00000297596 EVC2Q86UK5 1308 aa17.56■□□□□ 0.4
GEM-201ENST00000297596 ADGRB2O60241 1585 aa17.55■□□□□ 0.4
GEM-201ENST00000297596 ZKSCAN2Q63HK3 967 aa17.55■□□□□ 0.4
GEM-201ENST00000297596 GLI2P10070 1586 aa17.54■□□□□ 0.4
GEM-201ENST00000297596 CT47B1P0C2W7 299 aaPredicted RBP17.53■□□□□ 0.4
GEM-201ENST00000297596 DZIP1LQ8IYY4 767 aaKnown RBP17.53■□□□□ 0.4
GEM-201ENST00000297596 TULP4Q9NRJ4 1543 aa17.53■□□□□ 0.4
GEM-201ENST00000297596 GGT6Q6P531 493 aa17.53■□□□□ 0.4
GEM-201ENST00000297596 TBC1D2Q9BYX2 928 aa17.53■□□□□ 0.4
GEM-201ENST00000297596 POGKQ9P215 609 aa17.53■□□□□ 0.4
GEM-201ENST00000297596 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
GEM-201ENST00000297596 FRMPD1Q5SYB0 1578 aa17.52■□□□□ 0.4
GEM-201ENST00000297596 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.39
GEM-201ENST00000297596 HECW2Q9P2P5 1572 aa17.5■□□□□ 0.39
GEM-201ENST00000297596 TSR2Q969E8 191 aaKnown RBP17.5■□□□□ 0.39
GEM-201ENST00000297596 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
GEM-201ENST00000297596 CABP2Q9NPB3 220 aa17.49■□□□□ 0.39
GEM-201ENST00000297596 ABCC3O15438 1527 aa17.49■□□□□ 0.39
GEM-201ENST00000297596 MLH3Q9UHC1 1453 aa17.49■□□□□ 0.39
GEM-201ENST00000297596 VGFO15240 615 aaPredicted RBP17.49■□□□□ 0.39
GEM-201ENST00000297596 EXOSC9Q06265 439 aaKnown RBP17.49■□□□□ 0.39
GEM-201ENST00000297596 SMC4Q9NTJ3 1288 aa17.48■□□□□ 0.39
GEM-201ENST00000297596 CAMSAP1Q5T5Y3 1602 aa17.48■□□□□ 0.39
GEM-201ENST00000297596 POGZQ7Z3K3 1410 aa17.48■□□□□ 0.39
GEM-201ENST00000297596 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
GEM-201ENST00000297596 HDAC1Q13547 482 aaPredicted RBP17.48■□□□□ 0.39
GEM-201ENST00000297596 NUTM2DQ5VT03 806 aaPredicted RBP17.48■□□□□ 0.39
GEM-201ENST00000297596 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
GEM-201ENST00000297596 CD109Q6YHK3 1445 aa17.47■□□□□ 0.39
GEM-201ENST00000297596 NEXMIFQ5QGS0 1516 aa17.47■□□□□ 0.39
GEM-201ENST00000297596 TRIM27P14373 513 aa17.47■□□□□ 0.39
GEM-201ENST00000297596 ABCC11Q96J66 1382 aa17.47■□□□□ 0.39
GEM-201ENST00000297596 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
GEM-201ENST00000297596 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
GEM-201ENST00000297596 SIGLEC1Q9BZZ2 1709 aa17.46■□□□□ 0.39
GEM-201ENST00000297596 PIK3C2BO00750 1634 aa17.46■□□□□ 0.39
GEM-201ENST00000297596 U2SURPO15042 1029 aaKnown RBP17.45■□□□□ 0.38
GEM-201ENST00000297596 FAM43AQ8N2R8 423 aa17.45■□□□□ 0.38
GEM-201ENST00000297596 COL3A1P02461 1466 aaPredicted RBP17.45■□□□□ 0.38
GEM-201ENST00000297596 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
GEM-201ENST00000297596 ATF7IPQ6VMQ6 1270 aa17.45■□□□□ 0.38
GEM-201ENST00000297596 C22orf23Q9BZE7 217 aa17.45■□□□□ 0.38
GEM-201ENST00000297596 CFAP74Q9C0B2 1584 aa17.45■□□□□ 0.38
GEM-201ENST00000297596 IL16Q14005 1332 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms