RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 PXDNQ92626 1479 aa27.35■■□□□ 1.97
LRPAP1-201ENST00000296325 MARF1Q9Y4F3 1742 aaKnown RBP27.35■■□□□ 1.97
LRPAP1-201ENST00000296325 BLMP54132 1417 aaPredicted RBP27.34■■□□□ 1.97
LRPAP1-201ENST00000296325 CLTCL1P53675 1640 aa27.34■■□□□ 1.97
LRPAP1-201ENST00000296325 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.32■■□□□ 1.96
LRPAP1-201ENST00000296325 NPHP3Q7Z494 1330 aa27.31■■□□□ 1.96
LRPAP1-201ENST00000296325 LRP5O75197 1615 aa27.3■■□□□ 1.96
LRPAP1-201ENST00000296325 HFM1A2PYH4 1435 aa27.3■■□□□ 1.96
LRPAP1-201ENST00000296325 GLI3P10071 1580 aa27.3■■□□□ 1.96
LRPAP1-201ENST00000296325 RALGAPBQ86X10 1494 aa27.28■■□□□ 1.96
LRPAP1-201ENST00000296325 CDC42BPGQ6DT37 1551 aa27.27■■□□□ 1.96
LRPAP1-201ENST00000296325 SLIT2O94813 1529 aa27.27■■□□□ 1.96
LRPAP1-201ENST00000296325 DEFB132Q7Z7B7 95 aa27.25■■□□□ 1.95
LRPAP1-201ENST00000296325 UNC5CLQ8IV45 518 aa27.23■■□□□ 1.95
LRPAP1-201ENST00000296325 ESCO1Q5FWF5 840 aa27.22■■□□□ 1.95
LRPAP1-201ENST00000296325 VGFO15240 615 aaPredicted RBP27.21■■□□□ 1.95
LRPAP1-201ENST00000296325 KIF1BO60333 1816 aa27.2■■□□□ 1.95
LRPAP1-201ENST00000296325 FOXO3O43524 673 aa27.2■■□□□ 1.94
LRPAP1-201ENST00000296325 BRWD3Q6RI45 1802 aa27.2■■□□□ 1.94
LRPAP1-201ENST00000296325 XPCQ01831 940 aaPredicted RBP27.19■■□□□ 1.94
LRPAP1-201ENST00000296325 LRPPRCP42704 1394 aaKnown RBP27.15■■□□□ 1.94
LRPAP1-201ENST00000296325 USP32Q8NFA0 1604 aa27.14■■□□□ 1.94
LRPAP1-201ENST00000296325 ONECUT3O60422 494 aaPredicted RBP27.13■■□□□ 1.93
LRPAP1-201ENST00000296325 NAIPQ13075 1403 aa27.13■■□□□ 1.93
LRPAP1-201ENST00000296325 SPATA31A3Q5VYP0 1347 aa27.13■■□□□ 1.93
LRPAP1-201ENST00000296325 RPGRIP1LQ68CZ1 1315 aa27.13■■□□□ 1.93
LRPAP1-201ENST00000296325 SEPT12Q8IYM1 358 aa27.12■■□□□ 1.93
LRPAP1-201ENST00000296325 TECPR2O15040 1411 aa27.11■■□□□ 1.93
LRPAP1-201ENST00000296325 SF3B2Q13435 895 aaKnown RBP27.1■■□□□ 1.93
LRPAP1-201ENST00000296325 ITGAEP38570 1179 aa27.09■■□□□ 1.93
LRPAP1-201ENST00000296325 VPS72Q15906 364 aa27.09■■□□□ 1.93
LRPAP1-201ENST00000296325 PPLO60437 1756 aa27.09■■□□□ 1.93
LRPAP1-201ENST00000296325 HRCP23327 699 aa27.07■■□□□ 1.92
LRPAP1-201ENST00000296325 CCDC144AA2RUR9 1427 aa27.07■■□□□ 1.92
LRPAP1-201ENST00000296325 KRT27Q7Z3Y8 459 aa27.04■■□□□ 1.92
LRPAP1-201ENST00000296325 KIF1AQ12756 1690 aa27.04■■□□□ 1.92
LRPAP1-201ENST00000296325 NWD2Q9ULI1 1742 aa27.04■■□□□ 1.92
LRPAP1-201ENST00000296325 NUTM2FA1L443 756 aa27.03■■□□□ 1.92
LRPAP1-201ENST00000296325 PSDA5PKW4 1024 aaPredicted RBP27.03■■□□□ 1.92
LRPAP1-201ENST00000296325 FMN2Q9NZ56 1722 aa27.02■■□□□ 1.92
LRPAP1-201ENST00000296325 PLCH1Q4KWH8 1693 aa27.01■■□□□ 1.92
LRPAP1-201ENST00000296325 WAPLQ7Z5K2 1190 aa27.01■■□□□ 1.91
LRPAP1-201ENST00000296325 TNS3Q68CZ2 1445 aa27■■□□□ 1.91
LRPAP1-201ENST00000296325 PLEKHH1Q9ULM0 1364 aa26.99■■□□□ 1.91
LRPAP1-201ENST00000296325 ABCC11Q96J66 1382 aa26.98■■□□□ 1.91
LRPAP1-201ENST00000296325 BAG6P46379 1132 aa26.98■■□□□ 1.91
LRPAP1-201ENST00000296325 KRT28Q7Z3Y7 464 aa26.98■■□□□ 1.91
LRPAP1-201ENST00000296325 KNDC1Q76NI1 1749 aa26.96■■□□□ 1.91
LRPAP1-201ENST00000296325 ABCA3Q99758 1704 aa26.96■■□□□ 1.91
LRPAP1-201ENST00000296325 ADGRF5Q8IZF2 1346 aa26.95■■□□□ 1.91
LRPAP1-201ENST00000296325 CABLES1Q8TDN4 633 aa26.95■■□□□ 1.9
LRPAP1-201ENST00000296325 RRBP1Q9P2E9 1410 aaKnown RBP26.93■■□□□ 1.9
LRPAP1-201ENST00000296325 STK26Q9P289 416 aa26.93■■□□□ 1.9
LRPAP1-201ENST00000296325 SBNO1A3KN83 1393 aa26.92■■□□□ 1.9
LRPAP1-201ENST00000296325 DISP2A7MBM2 1401 aa26.91■■□□□ 1.9
LRPAP1-201ENST00000296325 CCDC9Q9Y3X0 531 aaKnown RBP26.91■■□□□ 1.9
LRPAP1-201ENST00000296325 NRAPQ86VF7 1730 aa26.9■■□□□ 1.9
LRPAP1-201ENST00000296325 FAM83GA6ND36 823 aa26.89■■□□□ 1.9
LRPAP1-201ENST00000296325 HAP1P54257 671 aaPredicted RBP26.89■■□□□ 1.9
LRPAP1-201ENST00000296325 NRXN1Q9ULB1 1477 aa26.88■■□□□ 1.89
LRPAP1-201ENST00000296325 EN1Q05925 392 aaPredicted RBP26.88■■□□□ 1.89
LRPAP1-201ENST00000296325 PHF8Q9UPP1 1060 aa26.88■■□□□ 1.89
LRPAP1-201ENST00000296325 RGPD1P0DJD0 1748 aa26.87■■□□□ 1.89
LRPAP1-201ENST00000296325 ARHGEF10O15013 1369 aa26.87■■□□□ 1.89
LRPAP1-201ENST00000296325 PSME1Q06323 249 aa26.87■■□□□ 1.89
LRPAP1-201ENST00000296325 SPATA31E1Q6ZUB1 1445 aa26.86■■□□□ 1.89
LRPAP1-201ENST00000296325 PIK3C2GO75747 1445 aa26.85■■□□□ 1.89
LRPAP1-201ENST00000296325 YTHDC2Q9H6S0 1430 aaKnown RBP26.85■■□□□ 1.89
LRPAP1-201ENST00000296325 RGPD8O14715 1765 aaPredicted RBP26.85■■□□□ 1.89
LRPAP1-201ENST00000296325 R3HDM1Q15032 1099 aaKnown RBP26.85■■□□□ 1.89
LRPAP1-201ENST00000296325 FAM98CQ17RN3 349 aaKnown RBP26.85■■□□□ 1.89
LRPAP1-201ENST00000296325 TMEM132EQ6IEE7 984 aa26.85■■□□□ 1.89
LRPAP1-201ENST00000296325 IFT172Q9UG01 1749 aa26.85■■□□□ 1.89
LRPAP1-201ENST00000296325 SIRT1Q96EB6 747 aa26.84■■□□□ 1.89
LRPAP1-201ENST00000296325 ANKRD30BQ9BXX2 1392 aa26.84■■□□□ 1.89
LRPAP1-201ENST00000296325 TNS1Q9HBL0 1735 aaKnown RBP26.83■■□□□ 1.89
LRPAP1-201ENST00000296325 SLC4A1APQ9BWU0 796 aaKnown RBP26.82■■□□□ 1.88
LRPAP1-201ENST00000296325 A0A0G2JS52 829 aa26.81■■□□□ 1.88
LRPAP1-201ENST00000296325 MYT1Q01538 1121 aa26.81■■□□□ 1.88
LRPAP1-201ENST00000296325 THSD7AQ9UPZ6 1657 aa26.8■■□□□ 1.88
LRPAP1-201ENST00000296325 PLEKHG5O94827 1062 aa26.78■■□□□ 1.88
LRPAP1-201ENST00000296325 FAM182BQ5T319 152 aa26.78■■□□□ 1.88
LRPAP1-201ENST00000296325 BTG4Q9NY30 223 aa26.78■■□□□ 1.88
LRPAP1-201ENST00000296325 COL14A1Q05707 1796 aaKnown RBP26.76■■□□□ 1.88
LRPAP1-201ENST00000296325 SPATA31A5Q5VU36 1347 aa26.76■■□□□ 1.87
LRPAP1-201ENST00000296325 SPATA31A7Q8IWB4 1347 aa26.76■■□□□ 1.87
LRPAP1-201ENST00000296325 LMOD2Q6P5Q4 547 aa26.76■■□□□ 1.87
LRPAP1-201ENST00000296325 TRPM3Q9HCF6 1732 aaPredicted RBP26.76■■□□□ 1.87
LRPAP1-201ENST00000296325 EZH2Q15910 746 aaKnown RBP26.75■■□□□ 1.87
LRPAP1-201ENST00000296325 CAMKK2Q96RR4 588 aa26.75■■□□□ 1.87
LRPAP1-201ENST00000296325 RGL3Q3MIN7 710 aa26.74■■□□□ 1.87
LRPAP1-201ENST00000296325 ANKARQ7Z5J8 1434 aa26.73■■□□□ 1.87
LRPAP1-201ENST00000296325 ALS2Q96Q42 1657 aa26.73■■□□□ 1.87
LRPAP1-201ENST00000296325 ADGRB2O60241 1585 aa26.71■■□□□ 1.87
LRPAP1-201ENST00000296325 PPARGC1BQ86YN6 1023 aaKnown RBP26.71■■□□□ 1.87
LRPAP1-201ENST00000296325 YY1P25490 414 aa26.7■■□□□ 1.86
LRPAP1-201ENST00000296325 PARD3Q8TEW0 1356 aa26.7■■□□□ 1.86
LRPAP1-201ENST00000296325 C14orf93Q9H972 538 aaKnown RBP26.69■■□□□ 1.86
LRPAP1-201ENST00000296325 CRYBG1Q9Y4K1 1723 aa26.68■■□□□ 1.86
LRPAP1-201ENST00000296325 PMFBP1Q8TBY8 1022 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms