RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 ZBTB47Q9UFB7 747 aaPredicted RBP8.15□□□□□ -1.11
VCAM1-201ENST00000294728 GGT6Q6P531 493 aa8.14□□□□□ -1.11
VCAM1-201ENST00000294728 ANKLE2Q86XL3 938 aa8.14□□□□□ -1.11
VCAM1-201ENST00000294728 KDM2BQ8NHM5 1336 aa8.14□□□□□ -1.11
VCAM1-201ENST00000294728 PIP4K2BP78356 416 aa8.14□□□□□ -1.11
VCAM1-201ENST00000294728 TRMT2AQ8IZ69 625 aaKnown RBP8.14□□□□□ -1.11
VCAM1-201ENST00000294728 UBR1Q8IWV7 1749 aa8.14□□□□□ -1.11
VCAM1-201ENST00000294728 MROH1Q8NDA8 1641 aa8.14□□□□□ -1.11
VCAM1-201ENST00000294728 DDRGK1Q96HY6 314 aa8.14□□□□□ -1.11
VCAM1-201ENST00000294728 DEKP35659 375 aaKnown RBP8.13□□□□□ -1.11
VCAM1-201ENST00000294728 THEMISQ8N1K5 641 aaPredicted RBP8.13□□□□□ -1.11
VCAM1-201ENST00000294728 AAMPQ13685 434 aa8.13□□□□□ -1.11
VCAM1-201ENST00000294728 PHF23Q9BUL5 403 aaPredicted RBP8.13□□□□□ -1.11
VCAM1-201ENST00000294728 PPM1GO15355 546 aaPredicted RBP8.12□□□□□ -1.11
VCAM1-201ENST00000294728 PDE4AP27815 886 aa8.12□□□□□ -1.11
VCAM1-201ENST00000294728 ABCC3O15438 1527 aa8.12□□□□□ -1.11
VCAM1-201ENST00000294728 SLIT1O75093 1534 aa8.12□□□□□ -1.11
VCAM1-201ENST00000294728 ARHGAP23Q9P227 1491 aa8.12□□□□□ -1.11
VCAM1-201ENST00000294728 RGS17Q9UGC6 210 aaPredicted RBP8.12□□□□□ -1.11
VCAM1-201ENST00000294728 PAK3O75914 559 aaPredicted RBP8.11□□□□□ -1.11
VCAM1-201ENST00000294728 FBXO31Q5XUX0 539 aaPredicted RBP8.11□□□□□ -1.11
VCAM1-201ENST00000294728 ERVK-7P63135 1459 aa8.11□□□□□ -1.11
VCAM1-201ENST00000294728 ZNF326Q5BKZ1 582 aaKnown RBP8.11□□□□□ -1.11
VCAM1-201ENST00000294728 CENPQQ7L2Z9 268 aaPredicted RBP8.11□□□□□ -1.11
VCAM1-201ENST00000294728 EXOC6Q8TAG9 804 aa8.11□□□□□ -1.11
VCAM1-201ENST00000294728 EFCAB6Q5THR3 1501 aa8.11□□□□□ -1.11
VCAM1-201ENST00000294728 AMER1Q5JTC6 1135 aaPredicted RBP8.11□□□□□ -1.11
VCAM1-201ENST00000294728 NBPF1Q3BBV0 1214 aa8.1□□□□□ -1.11
VCAM1-201ENST00000294728 PANK3Q9H999 370 aa8.1□□□□□ -1.11
VCAM1-201ENST00000294728 SHPRHQ149N8 1683 aa8.1□□□□□ -1.11
VCAM1-201ENST00000294728 FAM135BQ49AJ0 1406 aa8.09□□□□□ -1.11
VCAM1-201ENST00000294728 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.09□□□□□ -1.11
VCAM1-201ENST00000294728 PPLO60437 1756 aa8.09□□□□□ -1.11
VCAM1-201ENST00000294728 ADGRB3O60242 1522 aa8.09□□□□□ -1.11
VCAM1-201ENST00000294728 NKTRP30414 1462 aaKnown RBP8.09□□□□□ -1.11
VCAM1-201ENST00000294728 DUSP27Q5VZP5 1158 aa8.09□□□□□ -1.12
VCAM1-201ENST00000294728 PUS7Q96PZ0 661 aaKnown RBP8.09□□□□□ -1.12
VCAM1-201ENST00000294728 KDM2AQ9Y2K7 1162 aa8.09□□□□□ -1.12
VCAM1-201ENST00000294728 POLR3AO14802 1390 aaPredicted RBP8.08□□□□□ -1.12
VCAM1-201ENST00000294728 PPP2R1AP30153 589 aa8.08□□□□□ -1.12
VCAM1-201ENST00000294728 KANK1Q14678 1352 aa8.08□□□□□ -1.12
VCAM1-201ENST00000294728 KIF3BO15066 747 aa8.08□□□□□ -1.12
VCAM1-201ENST00000294728 RTL5Q5HYW3 569 aaPredicted RBP8.08□□□□□ -1.12
VCAM1-201ENST00000294728 NWD1Q149M9 1564 aa8.08□□□□□ -1.12
VCAM1-201ENST00000294728 ARHGAP31Q2M1Z3 1444 aa8.07□□□□□ -1.12
VCAM1-201ENST00000294728 PLEKHH1Q9ULM0 1364 aa8.07□□□□□ -1.12
VCAM1-201ENST00000294728 SLFN5Q08AF3 891 aa8.06□□□□□ -1.12
VCAM1-201ENST00000294728 ROBO1Q9Y6N7 1651 aa8.06□□□□□ -1.12
VCAM1-201ENST00000294728 GOLGA2Q08379 1002 aa8.06□□□□□ -1.12
VCAM1-201ENST00000294728 KNSTRNQ9Y448 316 aa8.06□□□□□ -1.12
VCAM1-201ENST00000294728 POLR3GLQ9BT43 218 aa8.05□□□□□ -1.12
VCAM1-201ENST00000294728 PIK3C2BO00750 1634 aa8.05□□□□□ -1.12
VCAM1-201ENST00000294728 ADGRB2O60241 1585 aa8.05□□□□□ -1.12
VCAM1-201ENST00000294728 QRICH2Q9H0J4 1663 aa8.05□□□□□ -1.12
VCAM1-201ENST00000294728 PDE3AQ14432 1141 aa8.04□□□□□ -1.12
VCAM1-201ENST00000294728 CDCA7LQ96GN5 454 aa8.04□□□□□ -1.12
VCAM1-201ENST00000294728 CRBNQ96SW2 442 aa8.04□□□□□ -1.12
VCAM1-201ENST00000294728 ADAMTS8Q9UP79 889 aa8.04□□□□□ -1.12
VCAM1-201ENST00000294728 SETD1AO15047 1707 aaKnown RBP8.04□□□□□ -1.12
VCAM1-201ENST00000294728 ANKRD26Q9UPS8 1709 aa8.04□□□□□ -1.12
VCAM1-201ENST00000294728 FAM161AQ3B820 660 aa8.04□□□□□ -1.12
VCAM1-201ENST00000294728 E9PSI1 815 aa8.04□□□□□ -1.12
VCAM1-201ENST00000294728 ADGRB1O14514 1584 aa8.04□□□□□ -1.12
VCAM1-201ENST00000294728 WDR43Q15061 677 aaKnown RBP eCLIP8.03□□□□□ -1.12
VCAM1-201ENST00000294728 POTEAQ6S8J7 498 aa8.03□□□□□ -1.12
VCAM1-201ENST00000294728 NSD2O96028 1365 aa8.03□□□□□ -1.12
VCAM1-201ENST00000294728 CGNL1Q0VF96 1302 aa8.03□□□□□ -1.12
VCAM1-201ENST00000294728 CCDC27Q2M243 656 aa8.02□□□□□ -1.13
VCAM1-201ENST00000294728 PHLPP1O60346 1717 aa8.02□□□□□ -1.13
VCAM1-201ENST00000294728 COL16A1Q07092 1604 aaPredicted RBP8.01□□□□□ -1.13
VCAM1-201ENST00000294728 RPGRIP1LQ68CZ1 1315 aa8.01□□□□□ -1.13
VCAM1-201ENST00000294728 LTKP29376 864 aa8.01□□□□□ -1.13
VCAM1-201ENST00000294728 C8orf34Q49A92 452 aa8.01□□□□□ -1.13
VCAM1-201ENST00000294728 CC2D1BQ5T0F9 858 aaKnown RBP8.01□□□□□ -1.13
VCAM1-201ENST00000294728 ARHGEF28Q8N1W1 1705 aaKnown RBP8.01□□□□□ -1.13
VCAM1-201ENST00000294728 MAPK8IP3Q9UPT6 1336 aa8.01□□□□□ -1.13
VCAM1-201ENST00000294728 TMEM2Q9UHN6 1383 aa8□□□□□ -1.13
VCAM1-201ENST00000294728 RGL3Q3MIN7 710 aa8□□□□□ -1.13
VCAM1-201ENST00000294728 ZFYVE9O95405 1425 aa8□□□□□ -1.13
VCAM1-201ENST00000294728 CT47B1P0C2W7 299 aaPredicted RBP7.99□□□□□ -1.13
VCAM1-201ENST00000294728 TMEM94Q12767 1356 aa7.99□□□□□ -1.13
VCAM1-201ENST00000294728 AHDC1Q5TGY3 1603 aaPredicted RBP7.99□□□□□ -1.13
VCAM1-201ENST00000294728 KCNA6P17658 529 aa7.99□□□□□ -1.13
VCAM1-201ENST00000294728 NCOA3Q9Y6Q9 1424 aa7.98□□□□□ -1.13
VCAM1-201ENST00000294728 CHD2O14647 1828 aaKnown RBP7.98□□□□□ -1.13
VCAM1-201ENST00000294728 CDK12Q9NYV4 1490 aaPredicted RBP7.98□□□□□ -1.13
VCAM1-201ENST00000294728 TXNDC2Q86VQ3 553 aa7.98□□□□□ -1.13
VCAM1-201ENST00000294728 WDR63Q8IWG1 891 aa7.98□□□□□ -1.13
VCAM1-201ENST00000294728 JCADQ9P266 1359 aa7.98□□□□□ -1.13
VCAM1-201ENST00000294728 NBR1Q14596 966 aa7.98□□□□□ -1.13
VCAM1-201ENST00000294728 CDC42BPGQ6DT37 1551 aa7.98□□□□□ -1.13
VCAM1-201ENST00000294728 EID1Q9Y6B2 187 aa7.97□□□□□ -1.13
VCAM1-201ENST00000294728 NEFMP07197 916 aa7.97□□□□□ -1.13
VCAM1-201ENST00000294728 NOS1P29475 1434 aa7.97□□□□□ -1.13
VCAM1-201ENST00000294728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.97□□□□□ -1.13
VCAM1-201ENST00000294728 LRP6O75581 1613 aa7.96□□□□□ -1.13
VCAM1-201ENST00000294728 DIP2AQ14689 1571 aa7.96□□□□□ -1.13
VCAM1-201ENST00000294728 C20orf194Q5TEA3 1177 aa7.96□□□□□ -1.14
VCAM1-201ENST00000294728 CFAP65Q6ZU64 1925 aaKnown RBP7.96□□□□□ -1.14
VCAM1-201ENST00000294728 PLIN1O60240 522 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms