RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 NEXMIFQ5QGS0 1516 aa19.86■□□□□ 0.77
CCDC116-201ENST00000292779 RPGRIP1LQ68CZ1 1315 aa19.86■□□□□ 0.77
CCDC116-201ENST00000292779 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
CCDC116-201ENST00000292779 CRBNQ96SW2 442 aa19.85■□□□□ 0.77
CCDC116-201ENST00000292779 QRICH2Q9H0J4 1663 aa19.85■□□□□ 0.77
CCDC116-201ENST00000292779 CCDC146Q8IYE0 955 aa19.85■□□□□ 0.77
CCDC116-201ENST00000292779 ADGRB1O14514 1584 aa19.84■□□□□ 0.77
CCDC116-201ENST00000292779 GOLGA2Q08379 1002 aa19.84■□□□□ 0.77
CCDC116-201ENST00000292779 RIMS1Q86UR5 1692 aaKnown RBP19.82■□□□□ 0.76
CCDC116-201ENST00000292779 TCERG1O14776 1098 aaKnown RBP19.81■□□□□ 0.76
CCDC116-201ENST00000292779 C20orf194Q5TEA3 1177 aa19.81■□□□□ 0.76
CCDC116-201ENST00000292779 A2ML1A8K2U0 1454 aa19.8■□□□□ 0.76
CCDC116-201ENST00000292779 SLFN5Q08AF3 891 aa19.79■□□□□ 0.76
CCDC116-201ENST00000292779 TNRQ92752 1358 aa19.79■□□□□ 0.76
CCDC116-201ENST00000292779 ADAMTSL3P82987 1691 aa19.79■□□□□ 0.76
CCDC116-201ENST00000292779 APAF1O14727 1248 aa19.79■□□□□ 0.76
CCDC116-201ENST00000292779 ANP32AP39687 249 aaKnown RBP19.78■□□□□ 0.76
CCDC116-201ENST00000292779 NOP58Q9Y2X3 529 aaKnown RBP19.78■□□□□ 0.76
CCDC116-201ENST00000292779 VGFO15240 615 aaPredicted RBP19.78■□□□□ 0.76
CCDC116-201ENST00000292779 SLC12A5Q9H2X9 1139 aa19.78■□□□□ 0.76
CCDC116-201ENST00000292779 NSD3Q9BZ95 1437 aa19.77■□□□□ 0.76
CCDC116-201ENST00000292779 TRMT2AQ8IZ69 625 aaKnown RBP19.76■□□□□ 0.75
CCDC116-201ENST00000292779 UBR1Q8IWV7 1749 aa19.76■□□□□ 0.75
CCDC116-201ENST00000292779 SPINK5Q9NQ38 1064 aaPredicted RBP19.75■□□□□ 0.75
CCDC116-201ENST00000292779 PAK3O75914 559 aaPredicted RBP19.74■□□□□ 0.75
CCDC116-201ENST00000292779 IPO9Q96P70 1041 aaKnown RBP19.74■□□□□ 0.75
CCDC116-201ENST00000292779 STAG3Q9UJ98 1225 aa19.74■□□□□ 0.75
CCDC116-201ENST00000292779 POLR3AO14802 1390 aaPredicted RBP19.74■□□□□ 0.75
CCDC116-201ENST00000292779 MS4A1P11836 297 aa19.73■□□□□ 0.75
CCDC116-201ENST00000292779 ARHGEF28Q8N1W1 1705 aaKnown RBP19.73■□□□□ 0.75
CCDC116-201ENST00000292779 PDE4AP27815 886 aa19.72■□□□□ 0.75
CCDC116-201ENST00000292779 MORC1Q86VD1 984 aa19.72■□□□□ 0.75
CCDC116-201ENST00000292779 SHPRHQ149N8 1683 aa19.72■□□□□ 0.75
CCDC116-201ENST00000292779 NKTRP30414 1462 aaKnown RBP19.71■□□□□ 0.75
CCDC116-201ENST00000292779 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.71■□□□□ 0.75
CCDC116-201ENST00000292779 TNNT2P45379 298 aaPredicted RBP19.71■□□□□ 0.75
CCDC116-201ENST00000292779 RIMS2Q9UQ26 1411 aa19.7■□□□□ 0.74
CCDC116-201ENST00000292779 USP32Q8NFA0 1604 aa19.7■□□□□ 0.74
CCDC116-201ENST00000292779 SKAP1Q86WV1 359 aa19.7■□□□□ 0.74
CCDC116-201ENST00000292779 ZFYVE9O95405 1425 aa19.7■□□□□ 0.74
CCDC116-201ENST00000292779 BACH2Q9BYV9 841 aa19.69■□□□□ 0.74
CCDC116-201ENST00000292779 E9PSI1 815 aa19.69■□□□□ 0.74
CCDC116-201ENST00000292779 DMRT2Q9Y5R5 561 aa19.69■□□□□ 0.74
CCDC116-201ENST00000292779 EVC2Q86UK5 1308 aa19.68■□□□□ 0.74
CCDC116-201ENST00000292779 NGEFQ8N5V2 710 aa19.68■□□□□ 0.74
CCDC116-201ENST00000292779 TULP4Q9NRJ4 1543 aa19.68■□□□□ 0.74
CCDC116-201ENST00000292779 KDM2BQ8NHM5 1336 aa19.68■□□□□ 0.74
CCDC116-201ENST00000292779 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
CCDC116-201ENST00000292779 NPM2Q86SE8 214 aaKnown RBP19.66■□□□□ 0.74
CCDC116-201ENST00000292779 CABP2Q9NPB3 220 aa19.65■□□□□ 0.74
CCDC116-201ENST00000292779 ZBTB47Q9UFB7 747 aaPredicted RBP19.65■□□□□ 0.74
CCDC116-201ENST00000292779 CGNL1Q0VF96 1302 aa19.65■□□□□ 0.74
CCDC116-201ENST00000292779 PUS7Q96PZ0 661 aaKnown RBP19.65■□□□□ 0.74
CCDC116-201ENST00000292779 STK26Q9P289 416 aa19.65■□□□□ 0.74
CCDC116-201ENST00000292779 NRXN3Q9Y4C0 1643 aa19.65■□□□□ 0.74
CCDC116-201ENST00000292779 PTPRMP28827 1452 aa19.64■□□□□ 0.74
CCDC116-201ENST00000292779 BCAR3O75815 825 aa19.64■□□□□ 0.74
CCDC116-201ENST00000292779 WWC1Q8IX03 1113 aa19.64■□□□□ 0.74
CCDC116-201ENST00000292779 LTKP29376 864 aa19.64■□□□□ 0.73
CCDC116-201ENST00000292779 CENPQQ7L2Z9 268 aaPredicted RBP19.64■□□□□ 0.73
CCDC116-201ENST00000292779 SETD1AO15047 1707 aaKnown RBP19.63■□□□□ 0.73
CCDC116-201ENST00000292779 NLRP1Q9C000 1473 aa19.63■□□□□ 0.73
CCDC116-201ENST00000292779 ALKQ9UM73 1620 aa19.63■□□□□ 0.73
CCDC116-201ENST00000292779 ANKRD36BQ8N2N9 1353 aa19.62■□□□□ 0.73
CCDC116-201ENST00000292779 TMEM2Q9UHN6 1383 aa19.62■□□□□ 0.73
CCDC116-201ENST00000292779 MTHFSP49914 203 aa19.62■□□□□ 0.73
CCDC116-201ENST00000292779 RUNDC1Q96C34 613 aa19.61■□□□□ 0.73
CCDC116-201ENST00000292779 IQSEC2Q5JU85 1478 aa19.6■□□□□ 0.73
CCDC116-201ENST00000292779 NEUROD2Q15784 382 aa19.59■□□□□ 0.73
CCDC116-201ENST00000292779 RRP7AQ9Y3A4 280 aaKnown RBP19.59■□□□□ 0.73
CCDC116-201ENST00000292779 SRPK2P78362 688 aaKnown RBP19.58■□□□□ 0.73
CCDC116-201ENST00000292779 TCP11L2Q8N4U5 519 aa19.58■□□□□ 0.73
CCDC116-201ENST00000292779 NSD2O96028 1365 aa19.58■□□□□ 0.72
CCDC116-201ENST00000292779 CFAP53Q96M91 514 aa19.58■□□□□ 0.72
CCDC116-201ENST00000292779 CEP170BQ9Y4F5 1589 aaPredicted RBP19.57■□□□□ 0.72
CCDC116-201ENST00000292779 NBR1Q14596 966 aa19.56■□□□□ 0.72
CCDC116-201ENST00000292779 PRAM1Q96QH2 718 aa19.56■□□□□ 0.72
CCDC116-201ENST00000292779 A0A1W2PP64 1363 aa19.56■□□□□ 0.72
CCDC116-201ENST00000292779 SETD1BQ9UPS6 1966 aaKnown RBP19.56■□□□□ 0.72
CCDC116-201ENST00000292779 YTHDC2Q9H6S0 1430 aaKnown RBP19.55■□□□□ 0.72
CCDC116-201ENST00000292779 METP08581 1390 aa19.55■□□□□ 0.72
CCDC116-201ENST00000292779 MINK1Q8N4C8 1332 aaPredicted RBP19.55■□□□□ 0.72
CCDC116-201ENST00000292779 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
CCDC116-201ENST00000292779 ARHGAP23Q9P227 1491 aa19.55■□□□□ 0.72
CCDC116-201ENST00000292779 TXNDC2Q86VQ3 553 aa19.54■□□□□ 0.72
CCDC116-201ENST00000292779 POGKQ9P215 609 aa19.54■□□□□ 0.72
CCDC116-201ENST00000292779 SLIT1O75093 1534 aa19.53■□□□□ 0.72
CCDC116-201ENST00000292779 PDE3AQ14432 1141 aa19.53■□□□□ 0.72
CCDC116-201ENST00000292779 NINLQ9Y2I6 1382 aa19.52■□□□□ 0.72
CCDC116-201ENST00000292779 ABCC11Q96J66 1382 aa19.52■□□□□ 0.72
CCDC116-201ENST00000292779 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.71
CCDC116-201ENST00000292779 KDM4FA0A1W2PPD8 638 aa19.51■□□□□ 0.71
CCDC116-201ENST00000292779 WDR63Q8IWG1 891 aa19.51■□□□□ 0.71
CCDC116-201ENST00000292779 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCDC116-201ENST00000292779 ZNF142P52746 1687 aaPredicted RBP19.51■□□□□ 0.71
CCDC116-201ENST00000292779 ATAD2Q6PL18 1390 aa19.5■□□□□ 0.71
CCDC116-201ENST00000292779 CANXP27824 592 aaKnown RBP19.5■□□□□ 0.71
CCDC116-201ENST00000292779 U2AF1L5P0DN76 240 aaPredicted RBP19.5■□□□□ 0.71
CCDC116-201ENST00000292779 U2AF1Q01081 240 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCDC116-201ENST00000292779 CCDC27Q2M243 656 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms