RNA–Protein interactions for RNA: ENST00000292393.9

ZNF3-201, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-201ENST00000292393 CHD2O14647 1828 aaKnown RBP16.79■□□□□ 0.28
ZNF3-201ENST00000292393 PLEKHH1Q9ULM0 1364 aa16.78■□□□□ 0.28
ZNF3-201ENST00000292393 ADGRB2O60241 1585 aa16.78■□□□□ 0.28
ZNF3-201ENST00000292393 KCNA6P17658 529 aa16.76■□□□□ 0.27
ZNF3-201ENST00000292393 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
ZNF3-201ENST00000292393 STRCQ7RTU9 1775 aa16.76■□□□□ 0.27
ZNF3-201ENST00000292393 NKTRP30414 1462 aaKnown RBP16.75■□□□□ 0.27
ZNF3-201ENST00000292393 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
ZNF3-201ENST00000292393 ATAD2Q6PL18 1390 aa16.74■□□□□ 0.27
ZNF3-201ENST00000292393 MINK1Q8N4C8 1332 aaPredicted RBP16.73■□□□□ 0.27
ZNF3-201ENST00000292393 SAFB2Q14151 953 aaKnown RBP eCLIP16.73■□□□□ 0.27
ZNF3-201ENST00000292393 POLR3GLQ9BT43 218 aa16.73■□□□□ 0.27
ZNF3-201ENST00000292393 MYOM1P52179 1685 aa16.72■□□□□ 0.27
ZNF3-201ENST00000292393 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.71■□□□□ 0.27
ZNF3-201ENST00000292393 WASLO00401 505 aaPredicted RBP16.71■□□□□ 0.27
ZNF3-201ENST00000292393 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
ZNF3-201ENST00000292393 CDK19Q9BWU1 502 aa16.69■□□□□ 0.26
ZNF3-201ENST00000292393 NCOA3Q9Y6Q9 1424 aa16.69■□□□□ 0.26
ZNF3-201ENST00000292393 SRPK2P78362 688 aaKnown RBP16.68■□□□□ 0.26
ZNF3-201ENST00000292393 CABP2Q9NPB3 220 aa16.68■□□□□ 0.26
ZNF3-201ENST00000292393 CDC42BPGQ6DT37 1551 aa16.67■□□□□ 0.26
ZNF3-201ENST00000292393 PER1O15534 1290 aaPredicted RBP16.66■□□□□ 0.26
ZNF3-201ENST00000292393 PANK3Q9H999 370 aa16.66■□□□□ 0.26
ZNF3-201ENST00000292393 ADGRL3Q9HAR2 1447 aa16.66■□□□□ 0.26
ZNF3-201ENST00000292393 ANKRD36BQ8N2N9 1353 aa16.64■□□□□ 0.26
ZNF3-201ENST00000292393 ANKARQ7Z5J8 1434 aa16.64■□□□□ 0.25
ZNF3-201ENST00000292393 ANP32CO43423 234 aa16.64■□□□□ 0.25
ZNF3-201ENST00000292393 ATP7BP35670 1465 aa16.64■□□□□ 0.25
ZNF3-201ENST00000292393 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
ZNF3-201ENST00000292393 NALCNQ8IZF0 1738 aa16.62■□□□□ 0.25
ZNF3-201ENST00000292393 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
ZNF3-201ENST00000292393 NPC1L1Q9UHC9 1359 aa16.62■□□□□ 0.25
ZNF3-201ENST00000292393 PROSER2Q86WR7 435 aaPredicted RBP16.61■□□□□ 0.25
ZNF3-201ENST00000292393 MIER1Q8N108 512 aa16.61■□□□□ 0.25
ZNF3-201ENST00000292393 TMC1Q8TDI8 760 aa16.61■□□□□ 0.25
ZNF3-201ENST00000292393 NUDT16Q96DE0 195 aaKnown RBP16.61■□□□□ 0.25
ZNF3-201ENST00000292393 SLC12A5Q9H2X9 1139 aa16.61■□□□□ 0.25
ZNF3-201ENST00000292393 TOPAZ1Q8N9V7 1692 aa16.61■□□□□ 0.25
ZNF3-201ENST00000292393 STRCP1A6NGW2 1772 aa16.61■□□□□ 0.25
ZNF3-201ENST00000292393 DCCP43146 1447 aa16.61■□□□□ 0.25
ZNF3-201ENST00000292393 FMN2Q9NZ56 1722 aa16.6■□□□□ 0.25
ZNF3-201ENST00000292393 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
ZNF3-201ENST00000292393 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
ZNF3-201ENST00000292393 CD163L1Q9NR16 1453 aa16.6■□□□□ 0.25
ZNF3-201ENST00000292393 PRKRIP1Q9H875 184 aaPredicted RBP16.59■□□□□ 0.25
ZNF3-201ENST00000292393 KNSTRNQ9Y448 316 aa16.59■□□□□ 0.25
ZNF3-201ENST00000292393 PRR36Q9H6K5 1346 aa16.59■□□□□ 0.25
ZNF3-201ENST00000292393 USP32Q8NFA0 1604 aa16.59■□□□□ 0.25
ZNF3-201ENST00000292393 CABP1Q9NZU7 370 aa16.58■□□□□ 0.24
ZNF3-201ENST00000292393 A0A1W2PP64 1363 aa16.58■□□□□ 0.24
ZNF3-201ENST00000292393 TMEM94Q12767 1356 aa16.58■□□□□ 0.24
ZNF3-201ENST00000292393 CPSF1Q10570 1443 aaKnown RBP16.58■□□□□ 0.24
ZNF3-201ENST00000292393 ITSN1Q15811 1721 aa16.57■□□□□ 0.24
ZNF3-201ENST00000292393 PLEKHG3A1L390 1219 aa16.57■□□□□ 0.24
ZNF3-201ENST00000292393 HDGFL2Q7Z4V5 671 aaPredicted RBP16.57■□□□□ 0.24
ZNF3-201ENST00000292393 CARD14Q9BXL6 1004 aa16.57■□□□□ 0.24
ZNF3-201ENST00000292393 C19orf44Q9H6X5 657 aa16.57■□□□□ 0.24
ZNF3-201ENST00000292393 LRRC7Q96NW7 1537 aa16.56■□□□□ 0.24
ZNF3-201ENST00000292393 AMER1Q5JTC6 1135 aaPredicted RBP16.56■□□□□ 0.24
ZNF3-201ENST00000292393 NSD3Q9BZ95 1437 aa16.55■□□□□ 0.24
ZNF3-201ENST00000292393 NSD2O96028 1365 aa16.55■□□□□ 0.24
ZNF3-201ENST00000292393 ZNF335Q9H4Z2 1342 aaPredicted RBP16.55■□□□□ 0.24
ZNF3-201ENST00000292393 CCER2I3L3R5 266 aa16.55■□□□□ 0.24
ZNF3-201ENST00000292393 RALBP1Q15311 655 aa16.55■□□□□ 0.24
ZNF3-201ENST00000292393 PARD3Q8TEW0 1356 aa16.54■□□□□ 0.24
ZNF3-201ENST00000292393 C14orf37Q86TY3 774 aa16.54■□□□□ 0.24
ZNF3-201ENST00000292393 ZNF692Q9BU19 519 aaPredicted RBP16.54■□□□□ 0.24
ZNF3-201ENST00000292393 POLR3AO14802 1390 aaPredicted RBP16.53■□□□□ 0.24
ZNF3-201ENST00000292393 EDC4Q6P2E9 1401 aaKnown RBP16.53■□□□□ 0.24
ZNF3-201ENST00000292393 CGNL1Q0VF96 1302 aa16.52■□□□□ 0.24
ZNF3-201ENST00000292393 MSH6P52701 1360 aa16.51■□□□□ 0.23
ZNF3-201ENST00000292393 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
ZNF3-201ENST00000292393 RBM33Q96EV2 1170 aaKnown RBP16.51■□□□□ 0.23
ZNF3-201ENST00000292393 AKAP12Q02952 1782 aa16.51■□□□□ 0.23
ZNF3-201ENST00000292393 MON2Q7Z3U7 1717 aa16.5■□□□□ 0.23
ZNF3-201ENST00000292393 CADPS2Q86UW7 1296 aa16.5■□□□□ 0.23
ZNF3-201ENST00000292393 BRD4O60885 1362 aaPredicted RBP16.5■□□□□ 0.23
ZNF3-201ENST00000292393 XIRP1Q702N8 1843 aaKnown RBP16.49■□□□□ 0.23
ZNF3-201ENST00000292393 ACEP12821 1306 aa16.48■□□□□ 0.23
ZNF3-201ENST00000292393 MYBBP1AQ9BQG0 1328 aaKnown RBP16.48■□□□□ 0.23
ZNF3-201ENST00000292393 USP6P35125 1406 aa16.48■□□□□ 0.23
ZNF3-201ENST00000292393 MST1RQ04912 1400 aa16.48■□□□□ 0.23
ZNF3-201ENST00000292393 ATF3P18847 181 aa16.48■□□□□ 0.23
ZNF3-201ENST00000292393 LTBP4Q8N2S1 1624 aa16.48■□□□□ 0.23
ZNF3-201ENST00000292393 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
ZNF3-201ENST00000292393 SSH2Q76I76 1423 aa16.47■□□□□ 0.23
ZNF3-201ENST00000292393 NUTM2FA1L443 756 aa16.47■□□□□ 0.23
ZNF3-201ENST00000292393 CC2D1BQ5T0F9 858 aaKnown RBP16.47■□□□□ 0.23
ZNF3-201ENST00000292393 NRKQ7Z2Y5 1582 aa16.47■□□□□ 0.23
ZNF3-201ENST00000292393 PHF8Q9UPP1 1060 aa16.46■□□□□ 0.23
ZNF3-201ENST00000292393 KIF1AQ12756 1690 aa16.46■□□□□ 0.23
ZNF3-201ENST00000292393 RGPD8O14715 1765 aaPredicted RBP16.44■□□□□ 0.22
ZNF3-201ENST00000292393 NGDNQ8NEJ9 315 aaKnown RBP16.44■□□□□ 0.22
ZNF3-201ENST00000292393 TTC21AQ8NDW8 1320 aa16.44■□□□□ 0.22
ZNF3-201ENST00000292393 FYB1O15117 783 aa16.43■□□□□ 0.22
ZNF3-201ENST00000292393 NLRP13Q86W25 1043 aa16.43■□□□□ 0.22
ZNF3-201ENST00000292393 PMFBP1Q8TBY8 1022 aa16.43■□□□□ 0.22
ZNF3-201ENST00000292393 ANKRD26Q9UPS8 1709 aa16.42■□□□□ 0.22
ZNF3-201ENST00000292393 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
ZNF3-201ENST00000292393 KIF20BQ96Q89 1820 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms