RNA–Protein interactions for RNA: ENST00000291892.10

RDH13-201, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-201ENST00000291892 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
RDH13-201ENST00000291892 SPDYE4A6NLX3 237 aa16.91■□□□□ 0.3
RDH13-201ENST00000291892 PRIM1P49642 420 aaKnown RBP16.91■□□□□ 0.3
RDH13-201ENST00000291892 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
RDH13-201ENST00000291892 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
RDH13-201ENST00000291892 CCDC94Q9BW85 323 aaPredicted RBP16.91■□□□□ 0.3
RDH13-201ENST00000291892 DNMT1P26358 1616 aaKnown RBP16.91■□□□□ 0.3
RDH13-201ENST00000291892 PPP4R3BQ5MIZ7 849 aa16.91■□□□□ 0.3
RDH13-201ENST00000291892 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
RDH13-201ENST00000291892 DDIT3P35638 169 aa16.9■□□□□ 0.3
RDH13-201ENST00000291892 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
RDH13-201ENST00000291892 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
RDH13-201ENST00000291892 TERF1P54274 439 aa16.9■□□□□ 0.3
RDH13-201ENST00000291892 AK9Q5TCS8 1911 aa16.9■□□□□ 0.3
RDH13-201ENST00000291892 BAG4O95429 457 aaKnown RBP16.89■□□□□ 0.29
RDH13-201ENST00000291892 ZSCAN23Q3MJ62 389 aa16.89■□□□□ 0.29
RDH13-201ENST00000291892 TPRNQ4KMQ1 711 aa16.89■□□□□ 0.29
RDH13-201ENST00000291892 SASS6Q6UVJ0 657 aa16.89■□□□□ 0.29
RDH13-201ENST00000291892 SMC5Q8IY18 1101 aa16.89■□□□□ 0.29
RDH13-201ENST00000291892 ZKSCAN5Q9Y2L8 839 aa16.89■□□□□ 0.29
RDH13-201ENST00000291892 COL17A1Q9UMD9 1497 aaPredicted RBP16.89■□□□□ 0.29
RDH13-201ENST00000291892 INSRP06213 1382 aa16.89■□□□□ 0.29
RDH13-201ENST00000291892 ZBTB22O15209 634 aa16.88■□□□□ 0.29
RDH13-201ENST00000291892 ZNF500O60304 480 aaPredicted RBP16.88■□□□□ 0.29
RDH13-201ENST00000291892 KLHL40Q2TBA0 621 aa16.88■□□□□ 0.29
RDH13-201ENST00000291892 MTERF4Q7Z6M4 381 aaKnown RBP16.88■□□□□ 0.29
RDH13-201ENST00000291892 ITPRIPQ8IWB1 547 aa16.88■□□□□ 0.29
RDH13-201ENST00000291892 STAC3Q96MF2 364 aa16.88■□□□□ 0.29
RDH13-201ENST00000291892 ANKRD30AQ9BXX3 1397 aa16.87■□□□□ 0.29
RDH13-201ENST00000291892 NAP1L2Q9ULW6 460 aaPredicted RBP16.87■□□□□ 0.29
RDH13-201ENST00000291892 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
RDH13-201ENST00000291892 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
RDH13-201ENST00000291892 NUP153P49790 1475 aaKnown RBP16.87■□□□□ 0.29
RDH13-201ENST00000291892 ZNF830Q96NB3 372 aaPredicted RBP16.86■□□□□ 0.29
RDH13-201ENST00000291892 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
RDH13-201ENST00000291892 PKP1Q13835 747 aa16.86■□□□□ 0.29
RDH13-201ENST00000291892 C17orf53Q8N3J3 647 aaPredicted RBP16.86■□□□□ 0.29
RDH13-201ENST00000291892 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
RDH13-201ENST00000291892 PRPF40AO75400 957 aaKnown RBP16.85■□□□□ 0.29
RDH13-201ENST00000291892 K7ELQ4 463 aaPredicted RBP16.85■□□□□ 0.29
RDH13-201ENST00000291892 CSPP1Q1MSJ5 1256 aa16.85■□□□□ 0.29
RDH13-201ENST00000291892 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
RDH13-201ENST00000291892 SYCE3A1L190 88 aa16.84■□□□□ 0.29
RDH13-201ENST00000291892 ATP2B3Q16720 1220 aa16.84■□□□□ 0.29
RDH13-201ENST00000291892 MVPQ14764 893 aaKnown RBP16.83■□□□□ 0.29
RDH13-201ENST00000291892 KIAA0556O60303 1618 aa16.83■□□□□ 0.29
RDH13-201ENST00000291892 SYNJ2O15056 1496 aa16.83■□□□□ 0.28
RDH13-201ENST00000291892 ARHGEF12Q9NZN5 1544 aa16.82■□□□□ 0.28
RDH13-201ENST00000291892 CGNQ9P2M7 1197 aaKnown RBP16.82■□□□□ 0.28
RDH13-201ENST00000291892 NCOA3Q9Y6Q9 1424 aa16.82■□□□□ 0.28
RDH13-201ENST00000291892 TSPY4P0CV99 314 aa16.82■□□□□ 0.28
RDH13-201ENST00000291892 TSPY10P0CW01 314 aa16.82■□□□□ 0.28
RDH13-201ENST00000291892 PTMSP20962 102 aa16.82■□□□□ 0.28
RDH13-201ENST00000291892 HNRNPMP52272 730 aaKnown RBP eCLIP16.82■□□□□ 0.28
RDH13-201ENST00000291892 UTP14CQ5TAP6 766 aaKnown RBP16.82■□□□□ 0.28
RDH13-201ENST00000291892 SNX21Q969T3 373 aa16.82■□□□□ 0.28
RDH13-201ENST00000291892 ZNF710Q8N1W2 664 aa16.81■□□□□ 0.28
RDH13-201ENST00000291892 FOXD4L6Q3SYB3 417 aaPredicted RBP16.8■□□□□ 0.28
RDH13-201ENST00000291892 FOXD4L3Q6VB84 417 aaPredicted RBP16.8■□□□□ 0.28
RDH13-201ENST00000291892 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
RDH13-201ENST00000291892 CCDC144AA2RUR9 1427 aa16.8■□□□□ 0.28
RDH13-201ENST00000291892 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
RDH13-201ENST00000291892 AEBP2Q6ZN18 517 aaPredicted RBP16.8■□□□□ 0.28
RDH13-201ENST00000291892 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
RDH13-201ENST00000291892 KIF2CQ99661 725 aa16.79■□□□□ 0.28
RDH13-201ENST00000291892 NINLQ9Y2I6 1382 aa16.79■□□□□ 0.28
RDH13-201ENST00000291892 TCP11L2Q8N4U5 519 aa16.79■□□□□ 0.28
RDH13-201ENST00000291892 PDLIM2Q96JY6 352 aa16.79■□□□□ 0.28
RDH13-201ENST00000291892 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
RDH13-201ENST00000291892 CCDC39Q9UFE4 941 aa16.79■□□□□ 0.28
RDH13-201ENST00000291892 PDIA4P13667 645 aaKnown RBP16.78■□□□□ 0.28
RDH13-201ENST00000291892 ZNF445P59923 1031 aa16.78■□□□□ 0.28
RDH13-201ENST00000291892 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
RDH13-201ENST00000291892 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
RDH13-201ENST00000291892 HS1BP3Q53T59 392 aa16.78■□□□□ 0.28
RDH13-201ENST00000291892 NSFL1CQ9UNZ2 370 aaKnown RBP16.78■□□□□ 0.28
RDH13-201ENST00000291892 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
RDH13-201ENST00000291892 LMBRD1Q9NUN5 540 aa16.78■□□□□ 0.28
RDH13-201ENST00000291892 MAGI1Q96QZ7 1491 aaPredicted RBP16.77■□□□□ 0.27
RDH13-201ENST00000291892 GPATCH8Q9UKJ3 1502 aaKnown RBP16.76■□□□□ 0.27
RDH13-201ENST00000291892 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
RDH13-201ENST00000291892 PLCB2Q00722 1185 aa16.76■□□□□ 0.27
RDH13-201ENST00000291892 ZNF771Q7L3S4 317 aaPredicted RBP16.76■□□□□ 0.27
RDH13-201ENST00000291892 TMEM63CQ9P1W3 806 aa16.76■□□□□ 0.27
RDH13-201ENST00000291892 TROQ12816 1431 aaPredicted RBP16.76■□□□□ 0.27
RDH13-201ENST00000291892 MYRIPQ8NFW9 859 aa16.75■□□□□ 0.27
RDH13-201ENST00000291892 FAM135AQ9P2D6 1515 aa16.75■□□□□ 0.27
RDH13-201ENST00000291892 U2AF2P26368 475 aaKnown RBP eCLIP16.75■□□□□ 0.27
RDH13-201ENST00000291892 ANKRD45Q5TZF3 282 aa16.75■□□□□ 0.27
RDH13-201ENST00000291892 PLEKHD1A6NEE1 506 aa16.75■□□□□ 0.27
RDH13-201ENST00000291892 TMEM51Q9NW97 253 aa16.75■□□□□ 0.27
RDH13-201ENST00000291892 TTC12Q9H892 705 aaPredicted RBP16.74■□□□□ 0.27
RDH13-201ENST00000291892 WDR7Q9Y4E6 1490 aa16.74■□□□□ 0.27
RDH13-201ENST00000291892 CDK11BP21127 795 aaKnown RBP16.74■□□□□ 0.27
RDH13-201ENST00000291892 C1orf115Q9H7X2 142 aa16.74■□□□□ 0.27
RDH13-201ENST00000291892 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
RDH13-201ENST00000291892 TRIM27P14373 513 aa16.73■□□□□ 0.27
RDH13-201ENST00000291892 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
RDH13-201ENST00000291892 TRPM1Q7Z4N2 1603 aa16.73■□□□□ 0.27
RDH13-201ENST00000291892 GTPBP4Q9BZE4 634 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms