RNA–Protein interactions for RNA: ENST00000288757.7

C12orf43-201, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C12orf43, Length 4,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-201ENST00000288757 APPP05067 770 aa13.14□□□□□ -0.31
C12orf43-201ENST00000288757 GTF2E1P29083 439 aaPredicted RBP13.14□□□□□ -0.31
C12orf43-201ENST00000288757 INTS3Q68E01 1043 aaKnown RBP13.14□□□□□ -0.31
C12orf43-201ENST00000288757 SMC3Q9UQE7 1217 aa13.14□□□□□ -0.31
C12orf43-201ENST00000288757 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
C12orf43-201ENST00000288757 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
C12orf43-201ENST00000288757 MRE11P49959 708 aa13.13□□□□□ -0.31
C12orf43-201ENST00000288757 SURF6O75683 361 aaKnown RBP13.13□□□□□ -0.31
C12orf43-201ENST00000288757 GNAI1P63096 354 aa13.13□□□□□ -0.31
C12orf43-201ENST00000288757 ATP6V1DQ9Y5K8 247 aa13.13□□□□□ -0.31
C12orf43-201ENST00000288757 GAPVD1Q14C86 1478 aa13.12□□□□□ -0.31
C12orf43-201ENST00000288757 FIBPO43427 364 aa13.12□□□□□ -0.31
C12orf43-201ENST00000288757 TPM4P67936 248 aa13.12□□□□□ -0.31
C12orf43-201ENST00000288757 FMNL2Q96PY5 1086 aa13.12□□□□□ -0.31
C12orf43-201ENST00000288757 MAP4K4O95819 1239 aaPredicted RBP13.12□□□□□ -0.31
C12orf43-201ENST00000288757 NUCB2P80303 420 aa13.12□□□□□ -0.31
C12orf43-201ENST00000288757 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
C12orf43-201ENST00000288757 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
C12orf43-201ENST00000288757 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
C12orf43-201ENST00000288757 NEUROD6Q96NK8 337 aa13.11□□□□□ -0.31
C12orf43-201ENST00000288757 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
C12orf43-201ENST00000288757 CDC45O75419 566 aa13.11□□□□□ -0.31
C12orf43-201ENST00000288757 TWISTNBQ3B726 338 aaPredicted RBP13.1□□□□□ -0.31
C12orf43-201ENST00000288757 STK11IPQ8N1F8 1099 aa13.1□□□□□ -0.31
C12orf43-201ENST00000288757 SYTL4Q96C24 671 aaPredicted RBP13.1□□□□□ -0.31
C12orf43-201ENST00000288757 HOMER1Q86YM7 354 aa13.1□□□□□ -0.31
C12orf43-201ENST00000288757 NOC3LQ8WTT2 800 aaKnown RBP13.1□□□□□ -0.31
C12orf43-201ENST00000288757 HDAC5Q9UQL6 1122 aa13.1□□□□□ -0.31
C12orf43-201ENST00000288757 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
C12orf43-201ENST00000288757 CUL7Q14999 1698 aa13.1□□□□□ -0.31
C12orf43-201ENST00000288757 NLRP6P59044 892 aa13.09□□□□□ -0.31
C12orf43-201ENST00000288757 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
C12orf43-201ENST00000288757 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
C12orf43-201ENST00000288757 CABP1Q9NZU7 370 aa13.09□□□□□ -0.31
C12orf43-201ENST00000288757 CPLX1O14810 134 aa13.09□□□□□ -0.31
C12orf43-201ENST00000288757 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
C12orf43-201ENST00000288757 NEXNQ0ZGT2 675 aa13.09□□□□□ -0.31
C12orf43-201ENST00000288757 G3BP1Q13283 466 aaKnown RBP eCLIP13.09□□□□□ -0.31
C12orf43-201ENST00000288757 ZNF771Q7L3S4 317 aaPredicted RBP13.09□□□□□ -0.31
C12orf43-201ENST00000288757 PRAM1Q96QH2 718 aa13.09□□□□□ -0.31
C12orf43-201ENST00000288757 ATP2B1P20020 1258 aa13.09□□□□□ -0.31
C12orf43-201ENST00000288757 SPC24Q8NBT2 197 aa13.09□□□□□ -0.31
C12orf43-201ENST00000288757 MIS18AQ9NYP9 233 aa13.08□□□□□ -0.32
C12orf43-201ENST00000288757 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
C12orf43-201ENST00000288757 UBTFL1P0CB47 393 aaPredicted RBP13.07□□□□□ -0.32
C12orf43-201ENST00000288757 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
C12orf43-201ENST00000288757 MCM4P33991 863 aa13.07□□□□□ -0.32
C12orf43-201ENST00000288757 DCTN1Q14203 1278 aa13.07□□□□□ -0.32
C12orf43-201ENST00000288757 TXNDC2Q86VQ3 553 aa13.07□□□□□ -0.32
C12orf43-201ENST00000288757 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
C12orf43-201ENST00000288757 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
C12orf43-201ENST00000288757 KIF3AQ9Y496 699 aa13.07□□□□□ -0.32
C12orf43-201ENST00000288757 TPD52L1Q16890 204 aaPredicted RBP13.07□□□□□ -0.32
C12orf43-201ENST00000288757 ATF7IPQ6VMQ6 1270 aa13.07□□□□□ -0.32
C12orf43-201ENST00000288757 IL1RAPL2Q9NP60 686 aa13.07□□□□□ -0.32
C12orf43-201ENST00000288757 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
C12orf43-201ENST00000288757 PSME1Q06323 249 aa13.06□□□□□ -0.32
C12orf43-201ENST00000288757 RAD21O60216 631 aa13.06□□□□□ -0.32
C12orf43-201ENST00000288757 PRG4Q92954 1404 aaPredicted RBP13.05□□□□□ -0.32
C12orf43-201ENST00000288757 TTC5Q8N0Z6 440 aa13.05□□□□□ -0.32
C12orf43-201ENST00000288757 STK3Q13188 491 aa13.05□□□□□ -0.32
C12orf43-201ENST00000288757 TMEM57Q8N5G2 664 aa13.05□□□□□ -0.32
C12orf43-201ENST00000288757 SDF4Q9BRK5 362 aa13.05□□□□□ -0.32
C12orf43-201ENST00000288757 VPS53Q5VIR6 699 aa13.05□□□□□ -0.32
C12orf43-201ENST00000288757 UPF3BQ9BZI7 483 aaKnown RBP13.05□□□□□ -0.32
C12orf43-201ENST00000288757 MTMR7Q9Y216 660 aa13.05□□□□□ -0.32
C12orf43-201ENST00000288757 FAM177BA6PVY3 158 aa13.04□□□□□ -0.32
C12orf43-201ENST00000288757 TPM3P06753 285 aa13.04□□□□□ -0.32
C12orf43-201ENST00000288757 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
C12orf43-201ENST00000288757 MVPQ14764 893 aaKnown RBP13.04□□□□□ -0.32
C12orf43-201ENST00000288757 SASS6Q6UVJ0 657 aa13.04□□□□□ -0.32
C12orf43-201ENST00000288757 SIL1Q9H173 461 aa13.04□□□□□ -0.32
C12orf43-201ENST00000288757 SMG6Q86US8 1419 aaKnown RBP13.04□□□□□ -0.32
C12orf43-201ENST00000288757 SLFN5Q08AF3 891 aa13.04□□□□□ -0.32
C12orf43-201ENST00000288757 GRPEL1Q9HAV7 217 aa13.04□□□□□ -0.32
C12orf43-201ENST00000288757 EFCAB5A4FU69 1503 aa13.04□□□□□ -0.32
C12orf43-201ENST00000288757 FBLN1P23142 703 aa13.03□□□□□ -0.32
C12orf43-201ENST00000288757 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.03□□□□□ -0.32
C12orf43-201ENST00000288757 RIC3Q7Z5B4 369 aa13.03□□□□□ -0.32
C12orf43-201ENST00000288757 MARCH6O60337 910 aa13.03□□□□□ -0.32
C12orf43-201ENST00000288757 CCDC34Q96HJ3 373 aa13.03□□□□□ -0.32
C12orf43-201ENST00000288757 TRIM5Q9C035 493 aa13.03□□□□□ -0.32
C12orf43-201ENST00000288757 EXOC6BQ9Y2D4 811 aa13.03□□□□□ -0.32
C12orf43-201ENST00000288757 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
C12orf43-201ENST00000288757 LARP6Q9BRS8 491 aaKnown RBP13.03□□□□□ -0.32
C12orf43-201ENST00000288757 NLRP2Q9NX02 1062 aa13.03□□□□□ -0.32
C12orf43-201ENST00000288757 CUX1P39880 1505 aa13.02□□□□□ -0.32
C12orf43-201ENST00000288757 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.32
C12orf43-201ENST00000288757 TTLL5Q6EMB2 1281 aa13.02□□□□□ -0.33
C12orf43-201ENST00000288757 CLASRPQ8N2M8 674 aaKnown RBP13.02□□□□□ -0.33
C12orf43-201ENST00000288757 FSD1Q9BTV5 496 aa13.02□□□□□ -0.33
C12orf43-201ENST00000288757 SMARCA5O60264 1052 aaPredicted RBP13.02□□□□□ -0.33
C12orf43-201ENST00000288757 CHD1LQ86WJ1 897 aa13.02□□□□□ -0.33
C12orf43-201ENST00000288757 DNAJC2Q99543 621 aaKnown RBP13.02□□□□□ -0.33
C12orf43-201ENST00000288757 MIA2Q96PC5 1412 aa13.01□□□□□ -0.33
C12orf43-201ENST00000288757 ESPNB1AK53 854 aa13.01□□□□□ -0.33
C12orf43-201ENST00000288757 AKAP17AQ02040 695 aaKnown RBP13.01□□□□□ -0.33
C12orf43-201ENST00000288757 SSH1Q8WYL5 1049 aa13.01□□□□□ -0.33
C12orf43-201ENST00000288757 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
C12orf43-201ENST00000288757 GOLGA6L1Q8N7Z2 621 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms