RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 NOB1Q9ULX3 412 aaKnown RBP15.55■□□□□ 0.08
SLC6A1-201ENST00000287766 NSD3Q9BZ95 1437 aa15.54■□□□□ 0.08
SLC6A1-201ENST00000287766 CABP1Q9NZU7 370 aa15.54■□□□□ 0.08
SLC6A1-201ENST00000287766 RALGAPBQ86X10 1494 aa15.54■□□□□ 0.08
SLC6A1-201ENST00000287766 AMPHP49418 695 aa15.54■□□□□ 0.08
SLC6A1-201ENST00000287766 THUMPD2Q9BTF0 503 aaKnown RBP15.53■□□□□ 0.08
SLC6A1-201ENST00000287766 DDX49Q9Y6V7 483 aaKnown RBP15.53■□□□□ 0.08
SLC6A1-201ENST00000287766 STK31Q9BXU1 1019 aa15.53■□□□□ 0.08
SLC6A1-201ENST00000287766 IGHDP01880 384 aa15.52■□□□□ 0.08
SLC6A1-201ENST00000287766 FAM43AQ8N2R8 423 aa15.52■□□□□ 0.07
SLC6A1-201ENST00000287766 DISP1Q96F81 1524 aa15.52■□□□□ 0.07
SLC6A1-201ENST00000287766 PTMSP20962 102 aa15.51■□□□□ 0.07
SLC6A1-201ENST00000287766 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
SLC6A1-201ENST00000287766 HAP1P54257 671 aaPredicted RBP15.51■□□□□ 0.07
SLC6A1-201ENST00000287766 PODXL2Q9NZ53 605 aa15.51■□□□□ 0.07
SLC6A1-201ENST00000287766 PARD3Q8TEW0 1356 aa15.51■□□□□ 0.07
SLC6A1-201ENST00000287766 KIAA0556O60303 1618 aa15.5■□□□□ 0.07
SLC6A1-201ENST00000287766 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
SLC6A1-201ENST00000287766 FBLN1P23142 703 aa15.5■□□□□ 0.07
SLC6A1-201ENST00000287766 LMOD3Q0VAK6 560 aa15.5■□□□□ 0.07
SLC6A1-201ENST00000287766 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
SLC6A1-201ENST00000287766 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
SLC6A1-201ENST00000287766 RARSP54136 660 aaKnown RBP15.49■□□□□ 0.07
SLC6A1-201ENST00000287766 SAMD9Q5K651 1589 aa15.49■□□□□ 0.07
SLC6A1-201ENST00000287766 FAM69CQ0P6D2 419 aa15.49■□□□□ 0.07
SLC6A1-201ENST00000287766 TNNQ9UQP3 1299 aa15.49■□□□□ 0.07
SLC6A1-201ENST00000287766 RILPL2Q969X0 211 aa15.49■□□□□ 0.07
SLC6A1-201ENST00000287766 PLEKHH1Q9ULM0 1364 aa15.48■□□□□ 0.07
SLC6A1-201ENST00000287766 ZNF771Q7L3S4 317 aaPredicted RBP15.48■□□□□ 0.07
SLC6A1-201ENST00000287766 KIF16BQ96L93 1317 aa15.48■□□□□ 0.07
SLC6A1-201ENST00000287766 NUTM2GQ5VZR2 741 aa15.48■□□□□ 0.07
SLC6A1-201ENST00000287766 CDK19Q9BWU1 502 aa15.48■□□□□ 0.07
SLC6A1-201ENST00000287766 MVPQ14764 893 aaKnown RBP15.47■□□□□ 0.07
SLC6A1-201ENST00000287766 TXNDC2Q86VQ3 553 aa15.47■□□□□ 0.07
SLC6A1-201ENST00000287766 SYAP1Q96A49 352 aaPredicted RBP15.47■□□□□ 0.07
SLC6A1-201ENST00000287766 CHMP5Q9NZZ3 219 aa15.47■□□□□ 0.07
SLC6A1-201ENST00000287766 SPATA31E1Q6ZUB1 1445 aa15.47■□□□□ 0.07
SLC6A1-201ENST00000287766 MCCP23508 829 aa15.47■□□□□ 0.07
SLC6A1-201ENST00000287766 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
SLC6A1-201ENST00000287766 TULP1O00294 542 aaPredicted RBP15.47■□□□□ 0.07
SLC6A1-201ENST00000287766 SYCP2Q9BX26 1530 aa15.47■□□□□ 0.07
SLC6A1-201ENST00000287766 ATF7IPQ6VMQ6 1270 aa15.46■□□□□ 0.07
SLC6A1-201ENST00000287766 WDR63Q8IWG1 891 aa15.46■□□□□ 0.07
SLC6A1-201ENST00000287766 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.07
SLC6A1-201ENST00000287766 FAM135AQ9P2D6 1515 aa15.46■□□□□ 0.07
SLC6A1-201ENST00000287766 HMMRO75330 724 aa15.46■□□□□ 0.07
SLC6A1-201ENST00000287766 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.06
SLC6A1-201ENST00000287766 DNMT1P26358 1616 aaKnown RBP15.45■□□□□ 0.06
SLC6A1-201ENST00000287766 TMPOP42166 694 aaKnown RBP15.45■□□□□ 0.06
SLC6A1-201ENST00000287766 SSH1Q8WYL5 1049 aa15.45■□□□□ 0.06
SLC6A1-201ENST00000287766 TMEM57Q8N5G2 664 aa15.45■□□□□ 0.06
SLC6A1-201ENST00000287766 RRS1Q15050 365 aaKnown RBP15.45■□□□□ 0.06
SLC6A1-201ENST00000287766 GNAI1P63096 354 aa15.44■□□□□ 0.06
SLC6A1-201ENST00000287766 WAPLQ7Z5K2 1190 aa15.44■□□□□ 0.06
SLC6A1-201ENST00000287766 CARD14Q9BXL6 1004 aa15.44■□□□□ 0.06
SLC6A1-201ENST00000287766 NKTRP30414 1462 aaKnown RBP15.43■□□□□ 0.06
SLC6A1-201ENST00000287766 EIF2S2P20042 333 aaKnown RBP15.43■□□□□ 0.06
SLC6A1-201ENST00000287766 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
SLC6A1-201ENST00000287766 KIAA1211Q6ZU35 1233 aa15.42■□□□□ 0.06
SLC6A1-201ENST00000287766 API5Q9BZZ5 524 aaKnown RBP15.42■□□□□ 0.06
SLC6A1-201ENST00000287766 LRPPRCP42704 1394 aaKnown RBP15.42■□□□□ 0.06
SLC6A1-201ENST00000287766 SCAF11Q99590 1463 aaKnown RBP15.42■□□□□ 0.06
SLC6A1-201ENST00000287766 TWISTNBQ3B726 338 aaPredicted RBP15.42■□□□□ 0.06
SLC6A1-201ENST00000287766 NOS1P29475 1434 aa15.42■□□□□ 0.06
SLC6A1-201ENST00000287766 TRAPPC8Q9Y2L5 1435 aa15.42■□□□□ 0.06
SLC6A1-201ENST00000287766 DCTN1Q14203 1278 aa15.42■□□□□ 0.06
SLC6A1-201ENST00000287766 R3HCC1Q9Y3T6 440 aaKnown RBP15.42■□□□□ 0.06
SLC6A1-201ENST00000287766 PCDHB15Q9Y5E8 787 aa15.41■□□□□ 0.06
SLC6A1-201ENST00000287766 ST18O60284 1047 aa15.41■□□□□ 0.06
SLC6A1-201ENST00000287766 IDI1Q13907 227 aa15.41■□□□□ 0.06
SLC6A1-201ENST00000287766 FKBP5Q13451 457 aaPredicted RBP15.4■□□□□ 0.06
SLC6A1-201ENST00000287766 FBXO31Q5XUX0 539 aaPredicted RBP15.4■□□□□ 0.06
SLC6A1-201ENST00000287766 EID1Q9Y6B2 187 aa15.4■□□□□ 0.06
SLC6A1-201ENST00000287766 RBM10P98175 930 aaKnown RBP15.4■□□□□ 0.06
SLC6A1-201ENST00000287766 TRAK2O60296 914 aa15.39■□□□□ 0.05
SLC6A1-201ENST00000287766 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
SLC6A1-201ENST00000287766 ZNF428Q96B54 188 aa15.39■□□□□ 0.05
SLC6A1-201ENST00000287766 TSPYL4Q9UJ04 414 aa15.39■□□□□ 0.05
SLC6A1-201ENST00000287766 ITSN2Q9NZM3 1697 aa15.39■□□□□ 0.05
SLC6A1-201ENST00000287766 RLBP1P12271 317 aa15.38■□□□□ 0.05
SLC6A1-201ENST00000287766 CFAP44Q96MT7 982 aa15.38■□□□□ 0.05
SLC6A1-201ENST00000287766 ADGRL1O94910 1474 aa15.38■□□□□ 0.05
SLC6A1-201ENST00000287766 TRIM27P14373 513 aa15.38■□□□□ 0.05
SLC6A1-201ENST00000287766 C8orf34Q49A92 452 aa15.38■□□□□ 0.05
SLC6A1-201ENST00000287766 RNF123Q5XPI4 1314 aa15.38■□□□□ 0.05
SLC6A1-201ENST00000287766 CCDC9Q9Y3X0 531 aaKnown RBP15.38■□□□□ 0.05
SLC6A1-201ENST00000287766 A2MP01023 1474 aa15.37■□□□□ 0.05
SLC6A1-201ENST00000287766 ZNF330Q9Y3S2 320 aaPredicted RBP15.37■□□□□ 0.05
SLC6A1-201ENST00000287766 AAMPQ13685 434 aa15.37■□□□□ 0.05
SLC6A1-201ENST00000287766 GPRASP1Q5JY77 1395 aa15.37■□□□□ 0.05
SLC6A1-201ENST00000287766 SEC24BO95487 1268 aa15.36■□□□□ 0.05
SLC6A1-201ENST00000287766 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.36■□□□□ 0.05
SLC6A1-201ENST00000287766 ANO2Q9NQ90 1003 aa15.36■□□□□ 0.05
SLC6A1-201ENST00000287766 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.36■□□□□ 0.05
SLC6A1-201ENST00000287766 MIS18AQ9NYP9 233 aa15.36■□□□□ 0.05
SLC6A1-201ENST00000287766 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
SLC6A1-201ENST00000287766 SKOR2Q2VWA4 1001 aaPredicted RBP15.36■□□□□ 0.05
SLC6A1-201ENST00000287766 MCTP1Q6DN14 999 aa15.35■□□□□ 0.05
SLC6A1-201ENST00000287766 BCL11BQ9C0K0 894 aaPredicted RBP15.35■□□□□ 0.05
SLC6A1-201ENST00000287766 UHRF1BP1Q6BDS2 1440 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms