RNA–Protein interactions for RNA: ENST00000283629.7

UBP1-202, Transcript of upstream binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBP1, Length 4,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-202ENST00000283629 HDGFL2Q7Z4V5 671 aaPredicted RBP23.36■■□□□ 1.33
UBP1-202ENST00000283629 CAVIN1Q6NZI2 390 aaKnown RBP23.36■■□□□ 1.33
UBP1-202ENST00000283629 RRAGDQ9NQL2 400 aaPredicted RBP23.35■■□□□ 1.33
UBP1-202ENST00000283629 IPO8O15397 1037 aaKnown RBP23.34■■□□□ 1.33
UBP1-202ENST00000283629 ZRSR1Q15695 479 aaKnown RBP23.34■■□□□ 1.33
UBP1-202ENST00000283629 PDZRN3Q9UPQ7 1066 aa23.34■■□□□ 1.33
UBP1-202ENST00000283629 MAPK8IP2Q13387 824 aaPredicted RBP23.33■■□□□ 1.33
UBP1-202ENST00000283629 SPATA31E1Q6ZUB1 1445 aa23.33■■□□□ 1.33
UBP1-202ENST00000283629 FAM135AQ9P2D6 1515 aa23.33■■□□□ 1.32
UBP1-202ENST00000283629 EVC2Q86UK5 1308 aa23.33■■□□□ 1.32
UBP1-202ENST00000283629 XRCC6P12956 609 aaKnown RBP eCLIP23.32■■□□□ 1.32
UBP1-202ENST00000283629 TCP11L2Q8N4U5 519 aa23.32■■□□□ 1.32
UBP1-202ENST00000283629 SYAP1Q96A49 352 aaPredicted RBP23.32■■□□□ 1.32
UBP1-202ENST00000283629 FAM69CQ0P6D2 419 aa23.32■■□□□ 1.32
UBP1-202ENST00000283629 RALGAPBQ86X10 1494 aa23.32■■□□□ 1.32
UBP1-202ENST00000283629 LRRIQ1Q96JM4 1722 aa23.31■■□□□ 1.32
UBP1-202ENST00000283629 ITSN2Q9NZM3 1697 aa23.31■■□□□ 1.32
UBP1-202ENST00000283629 PRAG1Q86YV5 1406 aa23.31■■□□□ 1.32
UBP1-202ENST00000283629 ZHX1Q9UKY1 873 aaPredicted RBP23.31■■□□□ 1.32
UBP1-202ENST00000283629 TERF2IPQ9NYB0 399 aa23.3■■□□□ 1.32
UBP1-202ENST00000283629 PER1O15534 1290 aaPredicted RBP23.3■■□□□ 1.32
UBP1-202ENST00000283629 GCC2Q8IWJ2 1684 aa23.29■■□□□ 1.32
UBP1-202ENST00000283629 MAP7D2Q96T17 732 aa23.29■■□□□ 1.32
UBP1-202ENST00000283629 UQCRHLA0A096LP55 91 aa23.28■■□□□ 1.32
UBP1-202ENST00000283629 UQCRHP07919 91 aa23.28■■□□□ 1.32
UBP1-202ENST00000283629 ZKSCAN2Q63HK3 967 aa23.28■■□□□ 1.32
UBP1-202ENST00000283629 CHMP4BQ9H444 224 aaKnown RBP23.27■■□□□ 1.32
UBP1-202ENST00000283629 CSPP1Q1MSJ5 1256 aa23.26■■□□□ 1.31
UBP1-202ENST00000283629 KCNJ4P48050 445 aa23.25■■□□□ 1.31
UBP1-202ENST00000283629 TBC1D2Q9BYX2 928 aa23.25■■□□□ 1.31
UBP1-202ENST00000283629 ST18O60284 1047 aa23.24■■□□□ 1.31
UBP1-202ENST00000283629 HMOX1P09601 288 aa23.23■■□□□ 1.31
UBP1-202ENST00000283629 PDCL3Q9H2J4 239 aa23.23■■□□□ 1.31
UBP1-202ENST00000283629 CCDC173Q0VFZ6 552 aa23.23■■□□□ 1.31
UBP1-202ENST00000283629 PRAM1Q96QH2 718 aa23.23■■□□□ 1.31
UBP1-202ENST00000283629 MCCP23508 829 aa23.23■■□□□ 1.31
UBP1-202ENST00000283629 TSR2Q969E8 191 aaKnown RBP23.23■■□□□ 1.31
UBP1-202ENST00000283629 CLCN1P35523 988 aa23.23■■□□□ 1.31
UBP1-202ENST00000283629 RUNDC1Q96C34 613 aa23.23■■□□□ 1.31
UBP1-202ENST00000283629 PLCH2O75038 1416 aa23.22■■□□□ 1.31
UBP1-202ENST00000283629 ZNF592Q92610 1267 aa23.22■■□□□ 1.31
UBP1-202ENST00000283629 ADGRL1O94910 1474 aa23.22■■□□□ 1.31
UBP1-202ENST00000283629 DZIP1LQ8IYY4 767 aaKnown RBP23.22■■□□□ 1.31
UBP1-202ENST00000283629 STAC3Q96MF2 364 aa23.22■■□□□ 1.31
UBP1-202ENST00000283629 ADGRL2O95490 1459 aa23.22■■□□□ 1.31
UBP1-202ENST00000283629 XPCQ01831 940 aaPredicted RBP23.21■■□□□ 1.31
UBP1-202ENST00000283629 LMOD2Q6P5Q4 547 aa23.2■■□□□ 1.31
UBP1-202ENST00000283629 FANCAO15360 1455 aa23.2■■□□□ 1.3
UBP1-202ENST00000283629 PRPF40AO75400 957 aaKnown RBP23.19■■□□□ 1.3
UBP1-202ENST00000283629 ZSCAN30Q86W11 494 aa23.19■■□□□ 1.3
UBP1-202ENST00000283629 CHMP3Q9Y3E7 222 aa23.19■■□□□ 1.3
UBP1-202ENST00000283629 RIPK4P57078 832 aa23.18■■□□□ 1.3
UBP1-202ENST00000283629 ABCC10Q5T3U5 1492 aa23.18■■□□□ 1.3
UBP1-202ENST00000283629 MBD5Q9P267 1494 aa23.18■■□□□ 1.3
UBP1-202ENST00000283629 A2MP01023 1474 aa23.18■■□□□ 1.3
UBP1-202ENST00000283629 KDM5BQ9UGL1 1544 aa23.17■■□□□ 1.3
UBP1-202ENST00000283629 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
UBP1-202ENST00000283629 NAP1L2Q9ULW6 460 aaPredicted RBP23.17■■□□□ 1.3
UBP1-202ENST00000283629 TRIM6-TRIM34B2RNG4 842 aa23.17■■□□□ 1.3
UBP1-202ENST00000283629 DUSP27Q5VZP5 1158 aa23.16■■□□□ 1.3
UBP1-202ENST00000283629 PARD3Q8TEW0 1356 aa23.16■■□□□ 1.3
UBP1-202ENST00000283629 FBLN1P23142 703 aa23.16■■□□□ 1.3
UBP1-202ENST00000283629 SLFN5Q08AF3 891 aa23.16■■□□□ 1.3
UBP1-202ENST00000283629 FGD1P98174 961 aa23.15■■□□□ 1.3
UBP1-202ENST00000283629 MTERF4Q7Z6M4 381 aaKnown RBP23.15■■□□□ 1.3
UBP1-202ENST00000283629 IDI1Q13907 227 aa23.14■■□□□ 1.3
UBP1-202ENST00000283629 NSD3Q9BZ95 1437 aa23.14■■□□□ 1.3
UBP1-202ENST00000283629 C8orf34Q49A92 452 aa23.14■■□□□ 1.29
UBP1-202ENST00000283629 CABP1Q9NZU7 370 aa23.14■■□□□ 1.29
UBP1-202ENST00000283629 NOS1P29475 1434 aa23.13■■□□□ 1.29
UBP1-202ENST00000283629 WWC1Q8IX03 1113 aa23.13■■□□□ 1.29
UBP1-202ENST00000283629 DIAPH1O60610 1272 aaKnown RBP23.13■■□□□ 1.29
UBP1-202ENST00000283629 TRHP20396 242 aaPredicted RBP23.13■■□□□ 1.29
UBP1-202ENST00000283629 SHANK2Q9UPX8 1470 aa23.12■■□□□ 1.29
UBP1-202ENST00000283629 PHF14O94880 888 aa23.12■■□□□ 1.29
UBP1-202ENST00000283629 CD109Q6YHK3 1445 aa23.12■■□□□ 1.29
UBP1-202ENST00000283629 CBX1P83916 185 aa23.12■■□□□ 1.29
UBP1-202ENST00000283629 CARD14Q9BXL6 1004 aa23.12■■□□□ 1.29
UBP1-202ENST00000283629 UHRF1BP1Q6BDS2 1440 aa23.12■■□□□ 1.29
UBP1-202ENST00000283629 GOLGA6L6A8MZA4 724 aa23.12■■□□□ 1.29
UBP1-202ENST00000283629 NRDCO43847 1150 aa23.11■■□□□ 1.29
UBP1-202ENST00000283629 OS9Q13438 667 aaPredicted RBP23.11■■□□□ 1.29
UBP1-202ENST00000283629 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
UBP1-202ENST00000283629 DDX19BQ9UMR2 479 aa23.11■■□□□ 1.29
UBP1-202ENST00000283629 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.1■■□□□ 1.29
UBP1-202ENST00000283629 NUCB2P80303 420 aa23.1■■□□□ 1.29
UBP1-202ENST00000283629 CCDC39Q9UFE4 941 aa23.1■■□□□ 1.29
UBP1-202ENST00000283629 EXOSC9Q06265 439 aaKnown RBP23.1■■□□□ 1.29
UBP1-202ENST00000283629 WAPLQ7Z5K2 1190 aa23.1■■□□□ 1.29
UBP1-202ENST00000283629 IGHDP01880 384 aa23.09■■□□□ 1.29
UBP1-202ENST00000283629 SEC24BO95487 1268 aa23.08■■□□□ 1.29
UBP1-202ENST00000283629 PDE3AQ14432 1141 aa23.08■■□□□ 1.29
UBP1-202ENST00000283629 TXNDC2Q86VQ3 553 aa23.08■■□□□ 1.29
UBP1-202ENST00000283629 SCAF11Q99590 1463 aaKnown RBP23.08■■□□□ 1.29
UBP1-202ENST00000283629 LTV1Q96GA3 475 aaPredicted RBP23.08■■□□□ 1.28
UBP1-202ENST00000283629 CFAP44Q96MT7 982 aa23.08■■□□□ 1.28
UBP1-202ENST00000283629 ISY1Q9ULR0 285 aaKnown RBP23.08■■□□□ 1.28
UBP1-202ENST00000283629 SLC4A10Q6U841 1118 aa23.07■■□□□ 1.28
UBP1-202ENST00000283629 PLEKHH1Q9ULM0 1364 aa23.07■■□□□ 1.28
UBP1-202ENST00000283629 DUOX2Q9NRD8 1548 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms