RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ARHGEF28Q8N1W1 1705 aaKnown RBP33.02■■■□□ 2.88
ROM1-201ENST00000278833 CFAP65Q6ZU64 1925 aaKnown RBP33■■■□□ 2.87
ROM1-201ENST00000278833 MS4A1P11836 297 aa33■■■□□ 2.87
ROM1-201ENST00000278833 ERICH6Q7L0X2 663 aa33■■■□□ 2.87
ROM1-201ENST00000278833 TRMT2AQ8IZ69 625 aaKnown RBP33■■■□□ 2.87
ROM1-201ENST00000278833 GOLGA2Q08379 1002 aa32.99■■■□□ 2.87
ROM1-201ENST00000278833 CARD14Q9BXL6 1004 aa32.99■■■□□ 2.87
ROM1-201ENST00000278833 SHPRHQ149N8 1683 aa32.98■■■□□ 2.87
ROM1-201ENST00000278833 ZFYVE9O95405 1425 aa32.98■■■□□ 2.87
ROM1-201ENST00000278833 SETD1BQ9UPS6 1966 aaKnown RBP32.95■■■□□ 2.87
ROM1-201ENST00000278833 SLFN5Q08AF3 891 aa32.94■■■□□ 2.86
ROM1-201ENST00000278833 CRBNQ96SW2 442 aa32.91■■■□□ 2.86
ROM1-201ENST00000278833 NKTRP30414 1462 aaKnown RBP32.9■■■□□ 2.86
ROM1-201ENST00000278833 NSD3Q9BZ95 1437 aa32.9■■■□□ 2.86
ROM1-201ENST00000278833 SPATA31D1Q6ZQQ2 1576 aa32.9■■■□□ 2.86
ROM1-201ENST00000278833 PREX1Q8TCU6 1659 aa32.89■■■□□ 2.86
ROM1-201ENST00000278833 TNRQ92752 1358 aa32.89■■■□□ 2.86
ROM1-201ENST00000278833 ANP32AP39687 249 aaKnown RBP32.88■■■□□ 2.85
ROM1-201ENST00000278833 NOP58Q9Y2X3 529 aaKnown RBP32.88■■■□□ 2.85
ROM1-201ENST00000278833 TULP4Q9NRJ4 1543 aa32.87■■■□□ 2.85
ROM1-201ENST00000278833 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.87■■■□□ 2.85
ROM1-201ENST00000278833 NSD2O96028 1365 aa32.86■■■□□ 2.85
ROM1-201ENST00000278833 PLIN1O60240 522 aa32.84■■■□□ 2.85
ROM1-201ENST00000278833 IPO9Q96P70 1041 aaKnown RBP32.84■■■□□ 2.85
ROM1-201ENST00000278833 IQSEC2Q5JU85 1478 aa32.83■■■□□ 2.85
ROM1-201ENST00000278833 KDM2BQ8NHM5 1336 aa32.82■■■□□ 2.84
ROM1-201ENST00000278833 E9PSI1 815 aa32.82■■■□□ 2.84
ROM1-201ENST00000278833 VGFO15240 615 aaPredicted RBP32.82■■■□□ 2.84
ROM1-201ENST00000278833 CHGAP10645 457 aaKnown RBP32.82■■■□□ 2.84
ROM1-201ENST00000278833 TMEM131LA2VDJ0 1609 aa32.81■■■□□ 2.84
ROM1-201ENST00000278833 NINLQ9Y2I6 1382 aa32.8■■■□□ 2.84
ROM1-201ENST00000278833 TRAK1Q9UPV9 953 aa32.8■■■□□ 2.84
ROM1-201ENST00000278833 NCBP3Q53F19 620 aaKnown RBP32.78■■■□□ 2.84
ROM1-201ENST00000278833 ANKRD36BQ8N2N9 1353 aa32.78■■■□□ 2.84
ROM1-201ENST00000278833 LMTK3Q96Q04 1460 aa32.78■■■□□ 2.84
ROM1-201ENST00000278833 APAF1O14727 1248 aa32.77■■■□□ 2.84
ROM1-201ENST00000278833 BACH2Q9BYV9 841 aa32.77■■■□□ 2.84
ROM1-201ENST00000278833 SLC52A1Q9NWF4 448 aa32.77■■■□□ 2.84
ROM1-201ENST00000278833 EVC2Q86UK5 1308 aa32.75■■■□□ 2.83
ROM1-201ENST00000278833 PDE4AP27815 886 aa32.75■■■□□ 2.83
ROM1-201ENST00000278833 CENPQQ7L2Z9 268 aaPredicted RBP32.74■■■□□ 2.83
ROM1-201ENST00000278833 MYO5BQ9ULV0 1848 aa32.74■■■□□ 2.83
ROM1-201ENST00000278833 NLRP1Q9C000 1473 aa32.74■■■□□ 2.83
ROM1-201ENST00000278833 IDI1Q13907 227 aa32.74■■■□□ 2.83
ROM1-201ENST00000278833 C20orf194Q5TEA3 1177 aa32.74■■■□□ 2.83
ROM1-201ENST00000278833 CCDC146Q8IYE0 955 aa32.74■■■□□ 2.83
ROM1-201ENST00000278833 CGNL1Q0VF96 1302 aa32.72■■■□□ 2.83
ROM1-201ENST00000278833 ANKRD26Q9UPS8 1709 aa32.71■■■□□ 2.83
ROM1-201ENST00000278833 CEP170BQ9Y4F5 1589 aaPredicted RBP32.71■■■□□ 2.83
ROM1-201ENST00000278833 MORC1Q86VD1 984 aa32.71■■■□□ 2.83
ROM1-201ENST00000278833 A2ML1A8K2U0 1454 aa32.71■■■□□ 2.83
ROM1-201ENST00000278833 HSPA2P54652 639 aa32.69■■■□□ 2.82
ROM1-201ENST00000278833 PHF23Q9BUL5 403 aaPredicted RBP32.69■■■□□ 2.82
ROM1-201ENST00000278833 SLC12A5Q9H2X9 1139 aa32.69■■■□□ 2.82
ROM1-201ENST00000278833 ADGRB2O60241 1585 aa32.69■■■□□ 2.82
ROM1-201ENST00000278833 ZNF142P52746 1687 aaPredicted RBP32.68■■■□□ 2.82
ROM1-201ENST00000278833 TMEM132EQ6IEE7 984 aa32.67■■■□□ 2.82
ROM1-201ENST00000278833 SPINK5Q9NQ38 1064 aaPredicted RBP32.67■■■□□ 2.82
ROM1-201ENST00000278833 MED14O60244 1454 aa32.66■■■□□ 2.82
ROM1-201ENST00000278833 RUNDC1Q96C34 613 aa32.64■■■□□ 2.82
ROM1-201ENST00000278833 PAK3O75914 559 aaPredicted RBP32.63■■■□□ 2.81
ROM1-201ENST00000278833 CCDC27Q2M243 656 aa32.63■■■□□ 2.81
ROM1-201ENST00000278833 ABCC11Q96J66 1382 aa32.62■■■□□ 2.81
ROM1-201ENST00000278833 WWC1Q8IX03 1113 aa32.62■■■□□ 2.81
ROM1-201ENST00000278833 ZBTB47Q9UFB7 747 aaPredicted RBP32.61■■■□□ 2.81
ROM1-201ENST00000278833 STAG3Q9UJ98 1225 aa32.6■■■□□ 2.81
ROM1-201ENST00000278833 PDE3AQ14432 1141 aa32.59■■■□□ 2.81
ROM1-201ENST00000278833 CFAP53Q96M91 514 aa32.59■■■□□ 2.81
ROM1-201ENST00000278833 THEMISQ8N1K5 641 aaPredicted RBP32.59■■■□□ 2.81
ROM1-201ENST00000278833 UBR1Q8IWV7 1749 aa32.58■■■□□ 2.81
ROM1-201ENST00000278833 ATAD2Q6PL18 1390 aa32.58■■■□□ 2.81
ROM1-201ENST00000278833 WDR63Q8IWG1 891 aa32.57■■■□□ 2.8
ROM1-201ENST00000278833 DMRT2Q9Y5R5 561 aa32.55■■■□□ 2.8
ROM1-201ENST00000278833 DLC1Q96QB1 1528 aa32.54■■■□□ 2.8
ROM1-201ENST00000278833 ALKQ9UM73 1620 aa32.54■■■□□ 2.8
ROM1-201ENST00000278833 YTHDC2Q9H6S0 1430 aaKnown RBP32.53■■■□□ 2.8
ROM1-201ENST00000278833 COL3A1P02461 1466 aaPredicted RBP32.53■■■□□ 2.8
ROM1-201ENST00000278833 AAMPQ13685 434 aa32.52■■■□□ 2.8
ROM1-201ENST00000278833 VIRMAQ69YN4 1812 aaKnown RBP32.51■■■□□ 2.8
ROM1-201ENST00000278833 A0A1W2PP64 1363 aa32.51■■■□□ 2.8
ROM1-201ENST00000278833 MTHFSP49914 203 aa32.51■■■□□ 2.79
ROM1-201ENST00000278833 CD163L1Q9NR16 1453 aa32.49■■■□□ 2.79
ROM1-201ENST00000278833 SETD1AO15047 1707 aaKnown RBP32.48■■■□□ 2.79
ROM1-201ENST00000278833 BCAR3O75815 825 aa32.48■■■□□ 2.79
ROM1-201ENST00000278833 TCP11L2Q8N4U5 519 aa32.48■■■□□ 2.79
ROM1-201ENST00000278833 KIF20BQ96Q89 1820 aa32.47■■■□□ 2.79
ROM1-201ENST00000278833 TMEM2Q9UHN6 1383 aa32.45■■■□□ 2.79
ROM1-201ENST00000278833 DDRGK1Q96HY6 314 aa32.44■■■□□ 2.78
ROM1-201ENST00000278833 CDC42BPGQ6DT37 1551 aa32.43■■■□□ 2.78
ROM1-201ENST00000278833 CABP2Q9NPB3 220 aa32.43■■■□□ 2.78
ROM1-201ENST00000278833 NCKAP5LQ9HCH0 1330 aa32.43■■■□□ 2.78
ROM1-201ENST00000278833 STRCQ7RTU9 1775 aa32.42■■■□□ 2.78
ROM1-201ENST00000278833 SLIT1O75093 1534 aa32.42■■■□□ 2.78
ROM1-201ENST00000278833 ARHGAP23Q9P227 1491 aa32.42■■■□□ 2.78
ROM1-201ENST00000278833 ANKLE2Q86XL3 938 aa32.42■■■□□ 2.78
ROM1-201ENST00000278833 FAM161AQ3B820 660 aa32.41■■■□□ 2.78
ROM1-201ENST00000278833 LTKP29376 864 aa32.4■■■□□ 2.78
ROM1-201ENST00000278833 NUTM2DQ5VT03 806 aaPredicted RBP32.4■■■□□ 2.78
ROM1-201ENST00000278833 TXNDC2Q86VQ3 553 aa32.39■■■□□ 2.78
ROM1-201ENST00000278833 CT47B1P0C2W7 299 aaPredicted RBP32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms