RNA–Protein interactions for RNA: ENST00000278100.10

BCCIP-201, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCCIP, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-201ENST00000278100 CDK12Q9NYV4 1490 aaPredicted RBP17.16■□□□□ 0.34
BCCIP-201ENST00000278100 NEXMIFQ5QGS0 1516 aa17.16■□□□□ 0.34
BCCIP-201ENST00000278100 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
BCCIP-201ENST00000278100 LRRC59Q96AG4 307 aaKnown RBP17.15■□□□□ 0.34
BCCIP-201ENST00000278100 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
BCCIP-201ENST00000278100 ADAMTS2O95450 1211 aa17.14■□□□□ 0.33
BCCIP-201ENST00000278100 QTRT2Q9H974 415 aaKnown RBP17.14■□□□□ 0.33
BCCIP-201ENST00000278100 KIF1BO60333 1816 aa17.12■□□□□ 0.33
BCCIP-201ENST00000278100 ABCB7O75027 752 aa17.12■□□□□ 0.33
BCCIP-201ENST00000278100 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
BCCIP-201ENST00000278100 C1orf167Q5SNV9 1468 aa17.11■□□□□ 0.33
BCCIP-201ENST00000278100 NPM3O75607 178 aaKnown RBP17.1■□□□□ 0.33
BCCIP-201ENST00000278100 RBM6P78332 1123 aaKnown RBP17.1■□□□□ 0.33
BCCIP-201ENST00000278100 NGLY1Q96IV0 654 aa17.1■□□□□ 0.33
BCCIP-201ENST00000278100 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
BCCIP-201ENST00000278100 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
BCCIP-201ENST00000278100 ORAI2Q96SN7 254 aa17.08■□□□□ 0.32
BCCIP-201ENST00000278100 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
BCCIP-201ENST00000278100 PTCH1Q13635 1447 aa17.04■□□□□ 0.32
BCCIP-201ENST00000278100 LAMC1P11047 1609 aa17.04■□□□□ 0.32
BCCIP-201ENST00000278100 USP21Q9UK80 565 aa17.04■□□□□ 0.32
BCCIP-201ENST00000278100 RGL3Q3MIN7 710 aa17.03■□□□□ 0.32
BCCIP-201ENST00000278100 ATAD2Q6PL18 1390 aa17.02■□□□□ 0.31
BCCIP-201ENST00000278100 SOS2Q07890 1332 aaPredicted RBP17.01■□□□□ 0.31
BCCIP-201ENST00000278100 PPLO60437 1756 aa17■□□□□ 0.31
BCCIP-201ENST00000278100 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
BCCIP-201ENST00000278100 VGFO15240 615 aaPredicted RBP16.99■□□□□ 0.31
BCCIP-201ENST00000278100 XPCQ01831 940 aaPredicted RBP16.99■□□□□ 0.31
BCCIP-201ENST00000278100 COL22A1Q8NFW1 1626 aaPredicted RBP16.99■□□□□ 0.31
BCCIP-201ENST00000278100 ATRNO75882 1429 aa16.97■□□□□ 0.31
BCCIP-201ENST00000278100 NUTM2FA1L443 756 aa16.97■□□□□ 0.31
BCCIP-201ENST00000278100 ESCO1Q5FWF5 840 aa16.97■□□□□ 0.31
BCCIP-201ENST00000278100 MARF1Q9Y4F3 1742 aaKnown RBP16.96■□□□□ 0.31
BCCIP-201ENST00000278100 CDC42BPGQ6DT37 1551 aa16.95■□□□□ 0.3
BCCIP-201ENST00000278100 MYOM2P54296 1465 aa16.95■□□□□ 0.3
BCCIP-201ENST00000278100 FNBP4Q8N3X1 1017 aaPredicted RBP16.95■□□□□ 0.3
BCCIP-201ENST00000278100 PXDNQ92626 1479 aa16.94■□□□□ 0.3
BCCIP-201ENST00000278100 STK26Q9P289 416 aa16.94■□□□□ 0.3
BCCIP-201ENST00000278100 PRAG1Q86YV5 1406 aa16.94■□□□□ 0.3
BCCIP-201ENST00000278100 NPHP3Q7Z494 1330 aa16.94■□□□□ 0.3
BCCIP-201ENST00000278100 FOXO3O43524 673 aa16.93■□□□□ 0.3
BCCIP-201ENST00000278100 KCNA4P22459 653 aa16.93■□□□□ 0.3
BCCIP-201ENST00000278100 RPGRIP1LQ68CZ1 1315 aa16.93■□□□□ 0.3
BCCIP-201ENST00000278100 BCL9LQ86UU0 1499 aa16.92■□□□□ 0.3
BCCIP-201ENST00000278100 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
BCCIP-201ENST00000278100 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
BCCIP-201ENST00000278100 PLEKHG5O94827 1062 aa16.9■□□□□ 0.3
BCCIP-201ENST00000278100 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
BCCIP-201ENST00000278100 PLEKHH1Q9ULM0 1364 aa16.89■□□□□ 0.29
BCCIP-201ENST00000278100 GJD4Q96KN9 370 aaPredicted RBP16.88■□□□□ 0.29
BCCIP-201ENST00000278100 TMEM132EQ6IEE7 984 aa16.87■□□□□ 0.29
BCCIP-201ENST00000278100 KDM2AQ9Y2K7 1162 aa16.87■□□□□ 0.29
BCCIP-201ENST00000278100 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
BCCIP-201ENST00000278100 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
BCCIP-201ENST00000278100 FMN2Q9NZ56 1722 aa16.86■□□□□ 0.29
BCCIP-201ENST00000278100 IFT172Q9UG01 1749 aa16.86■□□□□ 0.29
BCCIP-201ENST00000278100 GLI3P10071 1580 aa16.85■□□□□ 0.29
BCCIP-201ENST00000278100 KNDC1Q76NI1 1749 aa16.85■□□□□ 0.29
BCCIP-201ENST00000278100 BRWD3Q6RI45 1802 aa16.85■□□□□ 0.29
BCCIP-201ENST00000278100 LRPPRCP42704 1394 aaKnown RBP16.85■□□□□ 0.29
BCCIP-201ENST00000278100 RALGAPBQ86X10 1494 aa16.85■□□□□ 0.29
BCCIP-201ENST00000278100 EP400Q96L91 3159 aa16.85■□□□□ 0.29
BCCIP-201ENST00000278100 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
BCCIP-201ENST00000278100 KIF1AQ12756 1690 aa16.84■□□□□ 0.29
BCCIP-201ENST00000278100 RGPD8O14715 1765 aaPredicted RBP16.84■□□□□ 0.29
BCCIP-201ENST00000278100 SRCAPQ6ZRS2 3230 aa16.83■□□□□ 0.29
BCCIP-201ENST00000278100 TECPR2O15040 1411 aa16.83■□□□□ 0.28
BCCIP-201ENST00000278100 USP32Q8NFA0 1604 aa16.83■□□□□ 0.28
BCCIP-201ENST00000278100 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
BCCIP-201ENST00000278100 SPATA31E1Q6ZUB1 1445 aa16.82■□□□□ 0.28
BCCIP-201ENST00000278100 SPATA31A3Q5VYP0 1347 aa16.82■□□□□ 0.28
BCCIP-201ENST00000278100 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
BCCIP-201ENST00000278100 UNC5CLQ8IV45 518 aa16.82■□□□□ 0.28
BCCIP-201ENST00000278100 SLIT2O94813 1529 aa16.81■□□□□ 0.28
BCCIP-201ENST00000278100 KRT28Q7Z3Y7 464 aa16.81■□□□□ 0.28
BCCIP-201ENST00000278100 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
BCCIP-201ENST00000278100 DEFB132Q7Z7B7 95 aa16.8■□□□□ 0.28
BCCIP-201ENST00000278100 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
BCCIP-201ENST00000278100 CABLES1Q8TDN4 633 aa16.8■□□□□ 0.28
BCCIP-201ENST00000278100 PLCH1Q4KWH8 1693 aa16.8■□□□□ 0.28
BCCIP-201ENST00000278100 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
BCCIP-201ENST00000278100 ABCC11Q96J66 1382 aa16.79■□□□□ 0.28
BCCIP-201ENST00000278100 NEUROD1Q13562 356 aa16.79■□□□□ 0.28
BCCIP-201ENST00000278100 CFAP70Q5T0N1 1121 aa16.79■□□□□ 0.28
BCCIP-201ENST00000278100 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
BCCIP-201ENST00000278100 PIK3C2GO75747 1445 aa16.79■□□□□ 0.28
BCCIP-201ENST00000278100 BLMP54132 1417 aaPredicted RBP16.79■□□□□ 0.28
BCCIP-201ENST00000278100 SAFB2Q14151 953 aaKnown RBP eCLIP16.78■□□□□ 0.28
BCCIP-201ENST00000278100 LMOD2Q6P5Q4 547 aa16.78■□□□□ 0.28
BCCIP-201ENST00000278100 ABCA3Q99758 1704 aa16.78■□□□□ 0.28
BCCIP-201ENST00000278100 TNS3Q68CZ2 1445 aa16.78■□□□□ 0.28
BCCIP-201ENST00000278100 HRCP23327 699 aa16.77■□□□□ 0.28
BCCIP-201ENST00000278100 SEPT12Q8IYM1 358 aa16.77■□□□□ 0.28
BCCIP-201ENST00000278100 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
BCCIP-201ENST00000278100 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
BCCIP-201ENST00000278100 A0A0G2JS52 829 aa16.75■□□□□ 0.27
BCCIP-201ENST00000278100 MYT1Q01538 1121 aa16.75■□□□□ 0.27
BCCIP-201ENST00000278100 SF3B2Q13435 895 aaKnown RBP16.75■□□□□ 0.27
BCCIP-201ENST00000278100 PCGF6Q9BYE7 350 aa16.75■□□□□ 0.27
BCCIP-201ENST00000278100 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms