RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 KCNA4P22459 653 aa9.72□□□□□ -0.85
CD53-201ENST00000271324 CLTCL1P53675 1640 aa9.72□□□□□ -0.85
CD53-201ENST00000271324 ROCK1Q13464 1354 aa9.72□□□□□ -0.85
CD53-201ENST00000271324 KIF1BO60333 1816 aa9.72□□□□□ -0.85
CD53-201ENST00000271324 AFF2P51816 1311 aa9.72□□□□□ -0.85
CD53-201ENST00000271324 RXRBP28702 533 aa9.72□□□□□ -0.85
CD53-201ENST00000271324 ZNF326Q5BKZ1 582 aaKnown RBP9.71□□□□□ -0.86
CD53-201ENST00000271324 NEXMIFQ5QGS0 1516 aa9.7□□□□□ -0.86
CD53-201ENST00000271324 EP400Q96L91 3159 aa9.7□□□□□ -0.86
CD53-201ENST00000271324 ABCB7O75027 752 aa9.7□□□□□ -0.86
CD53-201ENST00000271324 DCCP43146 1447 aa9.69□□□□□ -0.86
CD53-201ENST00000271324 SETD5Q9C0A6 1442 aa9.69□□□□□ -0.86
CD53-201ENST00000271324 C8orf37Q96NL8 207 aa9.69□□□□□ -0.86
CD53-201ENST00000271324 SAMD1Q6SPF0 538 aaPredicted RBP9.68□□□□□ -0.86
CD53-201ENST00000271324 RGS12O14924 1447 aa9.68□□□□□ -0.86
CD53-201ENST00000271324 PNPLA6Q8IY17 1366 aa9.68□□□□□ -0.86
CD53-201ENST00000271324 LRRC59Q96AG4 307 aaKnown RBP9.67□□□□□ -0.86
CD53-201ENST00000271324 QTRT2Q9H974 415 aaKnown RBP9.67□□□□□ -0.86
CD53-201ENST00000271324 GTF3C3Q9Y5Q9 886 aa9.67□□□□□ -0.86
CD53-201ENST00000271324 ADGRL3Q9HAR2 1447 aa9.67□□□□□ -0.86
CD53-201ENST00000271324 CDK12Q9NYV4 1490 aaPredicted RBP9.67□□□□□ -0.86
CD53-201ENST00000271324 ADAMTS2O95450 1211 aa9.66□□□□□ -0.86
CD53-201ENST00000271324 NEUROD1Q13562 356 aa9.66□□□□□ -0.86
CD53-201ENST00000271324 LAMC1P11047 1609 aa9.66□□□□□ -0.86
CD53-201ENST00000271324 ORAI2Q96SN7 254 aa9.66□□□□□ -0.86
CD53-201ENST00000271324 C1orf167Q5SNV9 1468 aa9.66□□□□□ -0.86
CD53-201ENST00000271324 PPLO60437 1756 aa9.65□□□□□ -0.86
CD53-201ENST00000271324 MARF1Q9Y4F3 1742 aaKnown RBP9.64□□□□□ -0.87
CD53-201ENST00000271324 RBM6P78332 1123 aaKnown RBP9.64□□□□□ -0.87
CD53-201ENST00000271324 NGLY1Q96IV0 654 aa9.64□□□□□ -0.87
CD53-201ENST00000271324 RBM42Q9BTD8 480 aaKnown RBP9.64□□□□□ -0.87
CD53-201ENST00000271324 ROBO2Q9HCK4 1378 aa9.64□□□□□ -0.87
CD53-201ENST00000271324 COL22A1Q8NFW1 1626 aaPredicted RBP9.62□□□□□ -0.87
CD53-201ENST00000271324 NAIPQ13075 1403 aa9.61□□□□□ -0.87
CD53-201ENST00000271324 RGPD8O14715 1765 aaPredicted RBP9.61□□□□□ -0.87
CD53-201ENST00000271324 HAX1O00165 279 aa9.61□□□□□ -0.87
CD53-201ENST00000271324 USP21Q9UK80 565 aa9.61□□□□□ -0.87
CD53-201ENST00000271324 SOS2Q07890 1332 aaPredicted RBP9.61□□□□□ -0.87
CD53-201ENST00000271324 XPCQ01831 940 aaPredicted RBP9.6□□□□□ -0.87
CD53-201ENST00000271324 DIEXFQ68CQ4 756 aaKnown RBP9.6□□□□□ -0.87
CD53-201ENST00000271324 PTCH1Q13635 1447 aa9.6□□□□□ -0.87
CD53-201ENST00000271324 BRWD3Q6RI45 1802 aa9.6□□□□□ -0.87
CD53-201ENST00000271324 NUTM2FA1L443 756 aa9.58□□□□□ -0.88
CD53-201ENST00000271324 VGFO15240 615 aaPredicted RBP9.58□□□□□ -0.88
CD53-201ENST00000271324 IFT172Q9UG01 1749 aa9.58□□□□□ -0.88
CD53-201ENST00000271324 PXDNQ92626 1479 aa9.58□□□□□ -0.88
CD53-201ENST00000271324 ATRNO75882 1429 aa9.58□□□□□ -0.88
CD53-201ENST00000271324 ESCO1Q5FWF5 840 aa9.57□□□□□ -0.88
CD53-201ENST00000271324 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
CD53-201ENST00000271324 TRPC5Q9UL62 973 aaPredicted RBP9.57□□□□□ -0.88
CD53-201ENST00000271324 MYOM2P54296 1465 aa9.57□□□□□ -0.88
CD53-201ENST00000271324 BCL9LQ86UU0 1499 aa9.57□□□□□ -0.88
CD53-201ENST00000271324 ATAD2Q6PL18 1390 aa9.57□□□□□ -0.88
CD53-201ENST00000271324 WAPLQ7Z5K2 1190 aa9.56□□□□□ -0.88
CD53-201ENST00000271324 CCER1Q8TC90 406 aaPredicted RBP9.56□□□□□ -0.88
CD53-201ENST00000271324 CDC42BPGQ6DT37 1551 aa9.56□□□□□ -0.88
CD53-201ENST00000271324 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
CD53-201ENST00000271324 RRBP1Q9P2E9 1410 aaKnown RBP9.56□□□□□ -0.88
CD53-201ENST00000271324 ADGRF5Q8IZF2 1346 aa9.56□□□□□ -0.88
CD53-201ENST00000271324 FOXO3O43524 673 aa9.56□□□□□ -0.88
CD53-201ENST00000271324 STK26Q9P289 416 aa9.56□□□□□ -0.88
CD53-201ENST00000271324 FMN2Q9NZ56 1722 aa9.55□□□□□ -0.88
CD53-201ENST00000271324 PRAG1Q86YV5 1406 aa9.55□□□□□ -0.88
CD53-201ENST00000271324 SLC4A1APQ9BWU0 796 aaKnown RBP9.55□□□□□ -0.88
CD53-201ENST00000271324 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.55□□□□□ -0.88
CD53-201ENST00000271324 PLEKHH1Q9ULM0 1364 aa9.54□□□□□ -0.88
CD53-201ENST00000271324 GLI3P10071 1580 aa9.54□□□□□ -0.88
CD53-201ENST00000271324 RPGRIP1LQ68CZ1 1315 aa9.54□□□□□ -0.88
CD53-201ENST00000271324 CLSPNQ9HAW4 1339 aa9.54□□□□□ -0.88
CD53-201ENST00000271324 RGL3Q3MIN7 710 aa9.54□□□□□ -0.88
CD53-201ENST00000271324 TMEM132EQ6IEE7 984 aa9.54□□□□□ -0.88
CD53-201ENST00000271324 KNDC1Q76NI1 1749 aa9.54□□□□□ -0.88
CD53-201ENST00000271324 PLEKHG5O94827 1062 aa9.53□□□□□ -0.88
CD53-201ENST00000271324 NPHP3Q7Z494 1330 aa9.53□□□□□ -0.88
CD53-201ENST00000271324 GJD4Q96KN9 370 aaPredicted RBP9.52□□□□□ -0.88
CD53-201ENST00000271324 ABCA3Q99758 1704 aa9.52□□□□□ -0.89
CD53-201ENST00000271324 PLCH1Q4KWH8 1693 aa9.51□□□□□ -0.89
CD53-201ENST00000271324 USP32Q8NFA0 1604 aa9.51□□□□□ -0.89
CD53-201ENST00000271324 RALGAPBQ86X10 1494 aa9.51□□□□□ -0.89
CD53-201ENST00000271324 KIF1AQ12756 1690 aa9.51□□□□□ -0.89
CD53-201ENST00000271324 ZRANB1Q9UGI0 708 aa9.51□□□□□ -0.89
CD53-201ENST00000271324 TECPR2O15040 1411 aa9.5□□□□□ -0.89
CD53-201ENST00000271324 SPATA31E1Q6ZUB1 1445 aa9.5□□□□□ -0.89
CD53-201ENST00000271324 SLIT2O94813 1529 aa9.5□□□□□ -0.89
CD53-201ENST00000271324 MYCNP04198 464 aaPredicted RBP9.5□□□□□ -0.89
CD53-201ENST00000271324 CABLES1Q8TDN4 633 aa9.5□□□□□ -0.89
CD53-201ENST00000271324 SPATA31A3Q5VYP0 1347 aa9.49□□□□□ -0.89
CD53-201ENST00000271324 KRT28Q7Z3Y7 464 aa9.49□□□□□ -0.89
CD53-201ENST00000271324 DEFB132Q7Z7B7 95 aa9.49□□□□□ -0.89
CD53-201ENST00000271324 UNC5CLQ8IV45 518 aa9.49□□□□□ -0.89
CD53-201ENST00000271324 LRPPRCP42704 1394 aaKnown RBP9.49□□□□□ -0.89
CD53-201ENST00000271324 ABCC11Q96J66 1382 aa9.48□□□□□ -0.89
CD53-201ENST00000271324 CCDC144AA2RUR9 1427 aa9.48□□□□□ -0.89
CD53-201ENST00000271324 PIK3C2GO75747 1445 aa9.48□□□□□ -0.89
CD53-201ENST00000271324 YTHDC2Q9H6S0 1430 aaKnown RBP9.48□□□□□ -0.89
CD53-201ENST00000271324 NWD2Q9ULI1 1742 aa9.47□□□□□ -0.89
CD53-201ENST00000271324 SAFB2Q14151 953 aaKnown RBP eCLIP9.46□□□□□ -0.89
CD53-201ENST00000271324 CCDC125Q86Z20 511 aa9.46□□□□□ -0.89
CD53-201ENST00000271324 MPHOSPH9Q99550 1183 aa9.46□□□□□ -0.89
CD53-201ENST00000271324 SEPT12Q8IYM1 358 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms