RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 RGS3P49796 1198 aa10.59□□□□□ -0.71
NEDD1-201ENST00000266742 WDR63Q8IWG1 891 aa10.59□□□□□ -0.71
NEDD1-201ENST00000266742 BCAR3O75815 825 aa10.58□□□□□ -0.72
NEDD1-201ENST00000266742 NEUROD2Q15784 382 aa10.58□□□□□ -0.72
NEDD1-201ENST00000266742 NSD2O96028 1365 aa10.58□□□□□ -0.72
NEDD1-201ENST00000266742 TMEM132EQ6IEE7 984 aa10.58□□□□□ -0.72
NEDD1-201ENST00000266742 MYO3AQ8NEV4 1616 aa10.58□□□□□ -0.72
NEDD1-201ENST00000266742 MYH16Q9H6N6 1097 aa10.57□□□□□ -0.72
NEDD1-201ENST00000266742 LAS1LQ9Y4W2 734 aaKnown RBP10.57□□□□□ -0.72
NEDD1-201ENST00000266742 SPINK5Q9NQ38 1064 aaPredicted RBP10.57□□□□□ -0.72
NEDD1-201ENST00000266742 MAPK8IP3Q9UPT6 1336 aa10.57□□□□□ -0.72
NEDD1-201ENST00000266742 MTHFSP49914 203 aa10.57□□□□□ -0.72
NEDD1-201ENST00000266742 NCBP3Q53F19 620 aaKnown RBP10.57□□□□□ -0.72
NEDD1-201ENST00000266742 TCP11L2Q8N4U5 519 aa10.57□□□□□ -0.72
NEDD1-201ENST00000266742 PMFBP1Q8TBY8 1022 aa10.56□□□□□ -0.72
NEDD1-201ENST00000266742 FRAT1Q92837 279 aaPredicted RBP10.56□□□□□ -0.72
NEDD1-201ENST00000266742 CLUAP1Q96AJ1 413 aa10.56□□□□□ -0.72
NEDD1-201ENST00000266742 SLC52A1Q9NWF4 448 aa10.56□□□□□ -0.72
NEDD1-201ENST00000266742 IFT172Q9UG01 1749 aa10.56□□□□□ -0.72
NEDD1-201ENST00000266742 CCDC27Q2M243 656 aa10.55□□□□□ -0.72
NEDD1-201ENST00000266742 HECW2Q9P2P5 1572 aa10.55□□□□□ -0.72
NEDD1-201ENST00000266742 U2AF1L5P0DN76 240 aaPredicted RBP10.55□□□□□ -0.72
NEDD1-201ENST00000266742 U2AF1Q01081 240 aaKnown RBP eCLIP10.55□□□□□ -0.72
NEDD1-201ENST00000266742 ANKRD36BQ8N2N9 1353 aa10.55□□□□□ -0.72
NEDD1-201ENST00000266742 SKAP1Q86WV1 359 aa10.54□□□□□ -0.72
NEDD1-201ENST00000266742 SRPK2P78362 688 aaKnown RBP10.54□□□□□ -0.72
NEDD1-201ENST00000266742 PNNQ9H307 717 aaKnown RBP10.54□□□□□ -0.72
NEDD1-201ENST00000266742 COG6Q9Y2V7 657 aa10.54□□□□□ -0.72
NEDD1-201ENST00000266742 MROH2AA6NES4 1674 aa10.54□□□□□ -0.72
NEDD1-201ENST00000266742 NEO1Q92859 1461 aa10.54□□□□□ -0.72
NEDD1-201ENST00000266742 TERF2IPQ9NYB0 399 aa10.54□□□□□ -0.72
NEDD1-201ENST00000266742 RRP7AQ9Y3A4 280 aaKnown RBP10.54□□□□□ -0.72
NEDD1-201ENST00000266742 UPF2Q9HAU5 1272 aaKnown RBP10.53□□□□□ -0.72
NEDD1-201ENST00000266742 ABCC3O15438 1527 aa10.53□□□□□ -0.72
NEDD1-201ENST00000266742 C8orf34Q49A92 452 aa10.53□□□□□ -0.72
NEDD1-201ENST00000266742 CT47B1P0C2W7 299 aaPredicted RBP10.53□□□□□ -0.72
NEDD1-201ENST00000266742 RARSP54136 660 aaKnown RBP10.52□□□□□ -0.72
NEDD1-201ENST00000266742 RWDD1Q9H446 243 aaPredicted RBP10.52□□□□□ -0.73
NEDD1-201ENST00000266742 POGKQ9P215 609 aa10.52□□□□□ -0.73
NEDD1-201ENST00000266742 ADGRB1O14514 1584 aa10.52□□□□□ -0.73
NEDD1-201ENST00000266742 NUTM2DQ5VT03 806 aaPredicted RBP10.52□□□□□ -0.73
NEDD1-201ENST00000266742 PANK1Q8TE04 598 aa10.52□□□□□ -0.73
NEDD1-201ENST00000266742 RAPGEF3O95398 923 aa10.51□□□□□ -0.73
NEDD1-201ENST00000266742 DMRT2Q9Y5R5 561 aa10.51□□□□□ -0.73
NEDD1-201ENST00000266742 QRICH2Q9H0J4 1663 aa10.51□□□□□ -0.73
NEDD1-201ENST00000266742 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
NEDD1-201ENST00000266742 PPLO60437 1756 aa10.51□□□□□ -0.73
NEDD1-201ENST00000266742 BECN1Q14457 450 aa10.51□□□□□ -0.73
NEDD1-201ENST00000266742 ATAD2Q6PL18 1390 aa10.51□□□□□ -0.73
NEDD1-201ENST00000266742 FTSJ3Q8IY81 847 aaKnown RBP10.5□□□□□ -0.73
NEDD1-201ENST00000266742 STK26Q9P289 416 aa10.5□□□□□ -0.73
NEDD1-201ENST00000266742 STAG3Q9UJ98 1225 aa10.5□□□□□ -0.73
NEDD1-201ENST00000266742 ARHGAP31Q2M1Z3 1444 aa10.5□□□□□ -0.73
NEDD1-201ENST00000266742 IDI1Q13907 227 aa10.5□□□□□ -0.73
NEDD1-201ENST00000266742 SAFB2Q14151 953 aaKnown RBP eCLIP10.5□□□□□ -0.73
NEDD1-201ENST00000266742 HDGFL2Q7Z4V5 671 aaPredicted RBP10.5□□□□□ -0.73
NEDD1-201ENST00000266742 PHF23Q9BUL5 403 aaPredicted RBP10.5□□□□□ -0.73
NEDD1-201ENST00000266742 U2SURPO15042 1029 aaKnown RBP10.5□□□□□ -0.73
NEDD1-201ENST00000266742 USP32Q8NFA0 1604 aa10.5□□□□□ -0.73
NEDD1-201ENST00000266742 FRMPD1Q5SYB0 1578 aa10.5□□□□□ -0.73
NEDD1-201ENST00000266742 IGHDP01880 384 aa10.49□□□□□ -0.73
NEDD1-201ENST00000266742 ZFYVE9O95405 1425 aa10.49□□□□□ -0.73
NEDD1-201ENST00000266742 ZKSCAN2Q63HK3 967 aa10.49□□□□□ -0.73
NEDD1-201ENST00000266742 GLI2P10070 1586 aa10.48□□□□□ -0.73
NEDD1-201ENST00000266742 CAMSAP1Q5T5Y3 1602 aa10.48□□□□□ -0.73
NEDD1-201ENST00000266742 CFAP65Q6ZU64 1925 aaKnown RBP10.47□□□□□ -0.73
NEDD1-201ENST00000266742 DZIP1LQ8IYY4 767 aaKnown RBP10.47□□□□□ -0.73
NEDD1-201ENST00000266742 ABCC11Q96J66 1382 aa10.47□□□□□ -0.73
NEDD1-201ENST00000266742 SLC4A3P48751 1232 aa10.46□□□□□ -0.73
NEDD1-201ENST00000266742 BCL2L13Q9BXK5 485 aa10.46□□□□□ -0.73
NEDD1-201ENST00000266742 ZMYM3Q14202 1370 aa10.46□□□□□ -0.73
NEDD1-201ENST00000266742 IQSEC2Q5JU85 1478 aa10.46□□□□□ -0.73
NEDD1-201ENST00000266742 NFKBIBQ15653 356 aa10.46□□□□□ -0.73
NEDD1-201ENST00000266742 GGNBP2Q9H3C7 697 aa10.46□□□□□ -0.73
NEDD1-201ENST00000266742 SMC4Q9NTJ3 1288 aa10.46□□□□□ -0.73
NEDD1-201ENST00000266742 ZC3H13Q5T200 1668 aaKnown RBP10.46□□□□□ -0.74
NEDD1-201ENST00000266742 MVPQ14764 893 aaKnown RBP10.46□□□□□ -0.74
NEDD1-201ENST00000266742 NEXMIFQ5QGS0 1516 aa10.46□□□□□ -0.74
NEDD1-201ENST00000266742 IPO8O15397 1037 aaKnown RBP10.45□□□□□ -0.74
NEDD1-201ENST00000266742 DIAPH1O60610 1272 aaKnown RBP10.45□□□□□ -0.74
NEDD1-201ENST00000266742 PRAM1Q96QH2 718 aa10.45□□□□□ -0.74
NEDD1-201ENST00000266742 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
NEDD1-201ENST00000266742 IL16Q14005 1332 aa10.45□□□□□ -0.74
NEDD1-201ENST00000266742 A0A1W2PP64 1363 aa10.45□□□□□ -0.74
NEDD1-201ENST00000266742 TULP4Q9NRJ4 1543 aa10.45□□□□□ -0.74
NEDD1-201ENST00000266742 TMPOP42166 694 aaKnown RBP10.44□□□□□ -0.74
NEDD1-201ENST00000266742 DDX19BQ9UMR2 479 aa10.44□□□□□ -0.74
NEDD1-201ENST00000266742 SHPRHQ149N8 1683 aa10.44□□□□□ -0.74
NEDD1-201ENST00000266742 GSE1Q14687 1217 aa10.44□□□□□ -0.74
NEDD1-201ENST00000266742 CHMP4BQ9H444 224 aaKnown RBP10.44□□□□□ -0.74
NEDD1-201ENST00000266742 PIK3C2BO00750 1634 aa10.44□□□□□ -0.74
NEDD1-201ENST00000266742 PPP6R1Q9UPN7 881 aa10.43□□□□□ -0.74
NEDD1-201ENST00000266742 DIP2CQ9Y2E4 1556 aa10.43□□□□□ -0.74
NEDD1-201ENST00000266742 FYB1O15117 783 aa10.43□□□□□ -0.74
NEDD1-201ENST00000266742 RIPK4P57078 832 aa10.43□□□□□ -0.74
NEDD1-201ENST00000266742 CALD1Q05682 793 aaKnown RBP10.43□□□□□ -0.74
NEDD1-201ENST00000266742 PDZRN3Q9UPQ7 1066 aa10.43□□□□□ -0.74
NEDD1-201ENST00000266742 EXOSC9Q06265 439 aaKnown RBP10.42□□□□□ -0.74
NEDD1-201ENST00000266742 PCDHB15Q9Y5E8 787 aa10.42□□□□□ -0.74
NEDD1-201ENST00000266742 RLBP1P12271 317 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms