RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MYOM1P52179 1685 aa21.47■■□□□ 1.03
SQLE-201ENST00000265896 SRPK2P78362 688 aaKnown RBP21.46■■□□□ 1.03
SQLE-201ENST00000265896 PTPRTO14522 1441 aa21.46■■□□□ 1.03
SQLE-201ENST00000265896 FANCAO15360 1455 aa21.46■■□□□ 1.03
SQLE-201ENST00000265896 ZCCHC11Q5TAX3 1644 aaKnown RBP21.45■■□□□ 1.02
SQLE-201ENST00000265896 TBC1D2Q9BYX2 928 aa21.44■■□□□ 1.02
SQLE-201ENST00000265896 ZFYVE16Q7Z3T8 1539 aa21.43■■□□□ 1.02
SQLE-201ENST00000265896 MINK1Q8N4C8 1332 aaPredicted RBP21.43■■□□□ 1.02
SQLE-201ENST00000265896 ELL2O00472 640 aaPredicted RBP21.42■■□□□ 1.02
SQLE-201ENST00000265896 CFAP53Q96M91 514 aa21.42■■□□□ 1.02
SQLE-201ENST00000265896 UPF2Q9HAU5 1272 aaKnown RBP21.42■■□□□ 1.02
SQLE-201ENST00000265896 MAPK8IP3Q9UPT6 1336 aa21.42■■□□□ 1.02
SQLE-201ENST00000265896 RAPGEF3O95398 923 aa21.42■■□□□ 1.02
SQLE-201ENST00000265896 ADGRL1O94910 1474 aa21.41■■□□□ 1.02
SQLE-201ENST00000265896 BECN1Q14457 450 aa21.41■■□□□ 1.02
SQLE-201ENST00000265896 KDM5AP29375 1690 aaKnown RBP21.41■■□□□ 1.02
SQLE-201ENST00000265896 FOXD4L1Q9NU39 408 aa21.4■■□□□ 1.02
SQLE-201ENST00000265896 SPHKAPQ2M3C7 1700 aa21.4■■□□□ 1.02
SQLE-201ENST00000265896 NPC1L1Q9UHC9 1359 aa21.4■■□□□ 1.02
SQLE-201ENST00000265896 SSH1Q8WYL5 1049 aa21.4■■□□□ 1.02
SQLE-201ENST00000265896 POLR3AO14802 1390 aaPredicted RBP21.4■■□□□ 1.02
SQLE-201ENST00000265896 PMFBP1Q8TBY8 1022 aa21.39■■□□□ 1.02
SQLE-201ENST00000265896 THUMPD2Q9BTF0 503 aaKnown RBP21.39■■□□□ 1.02
SQLE-201ENST00000265896 DZIP1LQ8IYY4 767 aaKnown RBP21.39■■□□□ 1.01
SQLE-201ENST00000265896 ABCA6Q8N139 1617 aa21.39■■□□□ 1.01
SQLE-201ENST00000265896 RWDD1Q9H446 243 aaPredicted RBP21.39■■□□□ 1.01
SQLE-201ENST00000265896 C1orf115Q9H7X2 142 aa21.39■■□□□ 1.01
SQLE-201ENST00000265896 TRIM27P14373 513 aa21.38■■□□□ 1.01
SQLE-201ENST00000265896 NOB1Q9ULX3 412 aaKnown RBP21.38■■□□□ 1.01
SQLE-201ENST00000265896 MVPQ14764 893 aaKnown RBP21.37■■□□□ 1.01
SQLE-201ENST00000265896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.37■■□□□ 1.017e-8■■■■■ 27.2
SQLE-201ENST00000265896 ZKSCAN2Q63HK3 967 aa21.37■■□□□ 1.01
SQLE-201ENST00000265896 C14orf93Q9H972 538 aaKnown RBP21.37■■□□□ 1.01
SQLE-201ENST00000265896 ATP7AQ04656 1500 aa21.37■■□□□ 1.01
SQLE-201ENST00000265896 LNPKQ9C0E8 428 aa21.36■■□□□ 1.01
SQLE-201ENST00000265896 CEP152O94986 1710 aa21.35■■□□□ 1.01
SQLE-201ENST00000265896 TBC1D32Q96NH3 1257 aa21.35■■□□□ 1.01
SQLE-201ENST00000265896 MYH16Q9H6N6 1097 aa21.35■■□□□ 1.01
SQLE-201ENST00000265896 TMEM57Q8N5G2 664 aa21.34■■□□□ 1.01
SQLE-201ENST00000265896 RIPK4P57078 832 aa21.34■■□□□ 1.01
SQLE-201ENST00000265896 STAC3Q96MF2 364 aa21.33■■□□□ 1.01
SQLE-201ENST00000265896 HMOX1P09601 288 aa21.33■■□□□ 1
SQLE-201ENST00000265896 WDR63Q8IWG1 891 aa21.33■■□□□ 1
SQLE-201ENST00000265896 TMPOP42166 694 aaKnown RBP21.32■■□□□ 1
SQLE-201ENST00000265896 PANK2Q9BZ23 570 aa21.32■■□□□ 1
SQLE-201ENST00000265896 C22orf23Q9BZE7 217 aa21.31■■□□□ 1
SQLE-201ENST00000265896 MAP3K4Q9Y6R4 1608 aa21.31■■□□□ 1
SQLE-201ENST00000265896 CLASP1Q7Z460 1538 aa21.31■■□□□ 1
SQLE-201ENST00000265896 RTEL1-TNFRSF6BF6WH68 1400 aa21.31■■□□□ 1
SQLE-201ENST00000265896 ANTXR1Q9H6X2 564 aa21.31■■□□□ 1
SQLE-201ENST00000265896 TRIM35Q9UPQ4 493 aa21.3■■□□□ 1
SQLE-201ENST00000265896 EVC2Q86UK5 1308 aa21.3■■□□□ 1
SQLE-201ENST00000265896 PRKCSHP14314 528 aaPredicted RBP21.29■■□□□ 1
SQLE-201ENST00000265896 PRAM1Q96QH2 718 aa21.28■■□□□ 1
SQLE-201ENST00000265896 PHF23Q9BUL5 403 aaPredicted RBP21.28■■□□□ 1
SQLE-201ENST00000265896 NPATQ14207 1427 aa21.28■■□□□ 1
SQLE-201ENST00000265896 MROH2AA6NES4 1674 aa21.28■■□□□ 1
SQLE-201ENST00000265896 IDI1Q13907 227 aa21.28■■□□□ 1
SQLE-201ENST00000265896 NLRP1Q9C000 1473 aa21.28■■□□□ 1
SQLE-201ENST00000265896 SHROOM2Q13796 1616 aa21.27■■□□□ 1
SQLE-201ENST00000265896 TET3O43151 1660 aa21.27■■□□□ 1
SQLE-201ENST00000265896 ATF7IPQ6VMQ6 1270 aa21.26■□□□□ 0.99
SQLE-201ENST00000265896 A0A1W2PP64 1363 aa21.25■□□□□ 0.99
SQLE-201ENST00000265896 FYB1O15117 783 aa21.24■□□□□ 0.99
SQLE-201ENST00000265896 CABP1Q9NZU7 370 aa21.24■□□□□ 0.99
SQLE-201ENST00000265896 ZNF518AQ6AHZ1 1483 aa21.24■□□□□ 0.99
SQLE-201ENST00000265896 ASXL2Q76L83 1435 aa21.24■□□□□ 0.99
SQLE-201ENST00000265896 SLC24A1O60721 1099 aa21.24■□□□□ 0.99
SQLE-201ENST00000265896 NPM1P06748 294 aaKnown RBP eCLIP21.24■□□□□ 0.99
SQLE-201ENST00000265896 RRAGDQ9NQL2 400 aaPredicted RBP21.24■□□□□ 0.99
SQLE-201ENST00000265896 CD109Q6YHK3 1445 aa21.22■□□□□ 0.99
SQLE-201ENST00000265896 FBXO31Q5XUX0 539 aaPredicted RBP21.22■□□□□ 0.99
SQLE-201ENST00000265896 NGEFQ8N5V2 710 aa21.22■□□□□ 0.99
SQLE-201ENST00000265896 APBB1O00213 710 aa21.22■□□□□ 0.99
SQLE-201ENST00000265896 PLEKHF1Q96S99 279 aa21.22■□□□□ 0.99
SQLE-201ENST00000265896 ANKRD45Q5TZF3 282 aa21.21■□□□□ 0.99
SQLE-201ENST00000265896 TSPYL6Q8N831 410 aa21.21■□□□□ 0.99
SQLE-201ENST00000265896 RBM42Q9BTD8 480 aaKnown RBP21.21■□□□□ 0.99
SQLE-201ENST00000265896 ZRANB1Q9UGI0 708 aa21.21■□□□□ 0.99
SQLE-201ENST00000265896 PPRC1Q5VV67 1664 aaKnown RBP21.21■□□□□ 0.99
SQLE-201ENST00000265896 PRKAR2BP31323 418 aa21.21■□□□□ 0.99
SQLE-201ENST00000265896 WAPLQ7Z5K2 1190 aa21.21■□□□□ 0.99
SQLE-201ENST00000265896 PHACTR3Q96KR7 559 aa21.21■□□□□ 0.99
SQLE-201ENST00000265896 MYOM2P54296 1465 aa21.21■□□□□ 0.99
SQLE-201ENST00000265896 SHPRHQ149N8 1683 aa21.2■□□□□ 0.98
SQLE-201ENST00000265896 MROH1Q8NDA8 1641 aa21.2■□□□□ 0.98
SQLE-201ENST00000265896 ATAD2Q6PL18 1390 aa21.2■□□□□ 0.98
SQLE-201ENST00000265896 IQSEC2Q5JU85 1478 aa21.19■□□□□ 0.98
SQLE-201ENST00000265896 VGFO15240 615 aaPredicted RBP21.19■□□□□ 0.98
SQLE-201ENST00000265896 MCM4P33991 863 aa21.19■□□□□ 0.98
SQLE-201ENST00000265896 XRCC6P12956 609 aaKnown RBP eCLIP21.19■□□□□ 0.98
SQLE-201ENST00000265896 DCTN1Q14203 1278 aa21.19■□□□□ 0.98
SQLE-201ENST00000265896 NCKAP5LQ9HCH0 1330 aa21.18■□□□□ 0.98
SQLE-201ENST00000265896 DIAPH1O60610 1272 aaKnown RBP21.18■□□□□ 0.98
SQLE-201ENST00000265896 STAG3Q9UJ98 1225 aa21.18■□□□□ 0.98
SQLE-201ENST00000265896 DDX19BQ9UMR2 479 aa21.18■□□□□ 0.98
SQLE-201ENST00000265896 NINLQ9Y2I6 1382 aa21.18■□□□□ 0.98
SQLE-201ENST00000265896 KIF1BO60333 1816 aa21.17■□□□□ 0.98
SQLE-201ENST00000265896 EFCAB6Q5THR3 1501 aa21.17■□□□□ 0.98
SQLE-201ENST00000265896 SOX12O15370 315 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms