RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 KANK1Q14678 1352 aa11.1□□□□□ -0.63
VAPB-201ENST00000265619 ZSCAN30Q86W11 494 aa11.1□□□□□ -0.63
VAPB-201ENST00000265619 PARD3Q8TEW0 1356 aa11.1□□□□□ -0.63
VAPB-201ENST00000265619 TMEM51Q9NW97 253 aa11.09□□□□□ -0.63
VAPB-201ENST00000265619 ADAMTS8Q9UP79 889 aa11.09□□□□□ -0.63
VAPB-201ENST00000265619 CROCC2H7BZ55 1655 aa11.09□□□□□ -0.63
VAPB-201ENST00000265619 ZMYM4Q5VZL5 1548 aa11.09□□□□□ -0.63
VAPB-201ENST00000265619 PLCD3Q8N3E9 789 aa11.09□□□□□ -0.63
VAPB-201ENST00000265619 CHMP4AQ9BY43 222 aa11.08□□□□□ -0.63
VAPB-201ENST00000265619 STAG3Q9UJ98 1225 aa11.08□□□□□ -0.63
VAPB-201ENST00000265619 E9PCH4 1651 aa11.08□□□□□ -0.64
VAPB-201ENST00000265619 FAM135AQ9P2D6 1515 aa11.08□□□□□ -0.64
VAPB-201ENST00000265619 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
VAPB-201ENST00000265619 SAFB2Q14151 953 aaKnown RBP eCLIP11.08□□□□□ -0.64
VAPB-201ENST00000265619 ZNF830Q96NB3 372 aaPredicted RBP11.08□□□□□ -0.64
VAPB-201ENST00000265619 CHMP5Q9NZZ3 219 aa11.08□□□□□ -0.64
VAPB-201ENST00000265619 RTEL1-TNFRSF6BF6WH68 1400 aa11.07□□□□□ -0.64
VAPB-201ENST00000265619 SHANK2Q9UPX8 1470 aa11.07□□□□□ -0.64
VAPB-201ENST00000265619 PANK3Q9H999 370 aa11.07□□□□□ -0.64
VAPB-201ENST00000265619 CANXP27824 592 aaKnown RBP11.06□□□□□ -0.64
VAPB-201ENST00000265619 TNPO1Q92973 898 aaKnown RBP11.06□□□□□ -0.64
VAPB-201ENST00000265619 PPP1R9BQ96SB3 815 aa11.06□□□□□ -0.64
VAPB-201ENST00000265619 ABCC1P33527 1531 aa11.06□□□□□ -0.64
VAPB-201ENST00000265619 PER1O15534 1290 aaPredicted RBP11.06□□□□□ -0.64
VAPB-201ENST00000265619 IGSF3O75054 1194 aa11.06□□□□□ -0.64
VAPB-201ENST00000265619 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.06□□□□□ -0.64
VAPB-201ENST00000265619 PANK1Q8TE04 598 aa11.06□□□□□ -0.64
VAPB-201ENST00000265619 ESF1Q9H501 851 aaKnown RBP11.06□□□□□ -0.64
VAPB-201ENST00000265619 FAM177BA6PVY3 158 aa11.05□□□□□ -0.64
VAPB-201ENST00000265619 ARHGEF5Q12774 1597 aa11.05□□□□□ -0.64
VAPB-201ENST00000265619 CBX1P83916 185 aa11.05□□□□□ -0.64
VAPB-201ENST00000265619 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
VAPB-201ENST00000265619 TNNQ9UQP3 1299 aa11.05□□□□□ -0.64
VAPB-201ENST00000265619 DMRT2Q9Y5R5 561 aa11.05□□□□□ -0.64
VAPB-201ENST00000265619 MSNP26038 577 aaKnown RBP11.05□□□□□ -0.64
VAPB-201ENST00000265619 NASPP49321 788 aaPredicted RBP11.05□□□□□ -0.64
VAPB-201ENST00000265619 PAXIP1Q6ZW49 1069 aaPredicted RBP11.05□□□□□ -0.64
VAPB-201ENST00000265619 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
VAPB-201ENST00000265619 RIMBP3CA6NJZ7 1639 aa11.04□□□□□ -0.64
VAPB-201ENST00000265619 RIMBP3BA6NNM3 1639 aa11.04□□□□□ -0.64
VAPB-201ENST00000265619 RIMBP3Q9UFD9 1639 aa11.04□□□□□ -0.64
VAPB-201ENST00000265619 MAPK8IP2Q13387 824 aaPredicted RBP11.04□□□□□ -0.64
VAPB-201ENST00000265619 UTP14CQ5TAP6 766 aaKnown RBP11.04□□□□□ -0.64
VAPB-201ENST00000265619 CCDC173Q0VFZ6 552 aa11.03□□□□□ -0.64
VAPB-201ENST00000265619 MAP7D2Q96T17 732 aa11.03□□□□□ -0.64
VAPB-201ENST00000265619 EIF3AQ14152 1382 aaKnown RBP11.03□□□□□ -0.64
VAPB-201ENST00000265619 DDIT3P35638 169 aa11.03□□□□□ -0.64
VAPB-201ENST00000265619 MFAP1P55081 439 aaKnown RBP11.03□□□□□ -0.64
VAPB-201ENST00000265619 BRD2P25440 801 aaKnown RBP11.03□□□□□ -0.64
VAPB-201ENST00000265619 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.64
VAPB-201ENST00000265619 ATP2B3Q16720 1220 aa11.02□□□□□ -0.64
VAPB-201ENST00000265619 STK26Q9P289 416 aa11.02□□□□□ -0.64
VAPB-201ENST00000265619 ATP7AQ04656 1500 aa11.02□□□□□ -0.64
VAPB-201ENST00000265619 DUOX2Q9NRD8 1548 aa11.02□□□□□ -0.64
VAPB-201ENST00000265619 ZNF521Q96K83 1311 aa11.02□□□□□ -0.64
VAPB-201ENST00000265619 ZNF710Q8N1W2 664 aa11.02□□□□□ -0.65
VAPB-201ENST00000265619 CCDC94Q9BW85 323 aaPredicted RBP11.02□□□□□ -0.65
VAPB-201ENST00000265619 TERF1P54274 439 aa11.02□□□□□ -0.65
VAPB-201ENST00000265619 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
VAPB-201ENST00000265619 PCDHB15Q9Y5E8 787 aa11.01□□□□□ -0.65
VAPB-201ENST00000265619 AK9Q5TCS8 1911 aa11.01□□□□□ -0.65
VAPB-201ENST00000265619 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
VAPB-201ENST00000265619 FBXO31Q5XUX0 539 aaPredicted RBP11.01□□□□□ -0.65
VAPB-201ENST00000265619 TMEM132EQ6IEE7 984 aa11.01□□□□□ -0.65
VAPB-201ENST00000265619 ANP32BQ92688 251 aaKnown RBP11.01□□□□□ -0.65
VAPB-201ENST00000265619 PDZRN3Q9UPQ7 1066 aa11.01□□□□□ -0.65
VAPB-201ENST00000265619 ADRA2BP18089 450 aa11.01□□□□□ -0.65
VAPB-201ENST00000265619 SLFN5Q08AF3 891 aa11□□□□□ -0.65
VAPB-201ENST00000265619 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
VAPB-201ENST00000265619 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
VAPB-201ENST00000265619 YEATS2Q9ULM3 1422 aa11□□□□□ -0.65
VAPB-201ENST00000265619 GOLGA2Q08379 1002 aa11□□□□□ -0.65
VAPB-201ENST00000265619 CLUAP1Q96AJ1 413 aa11□□□□□ -0.65
VAPB-201ENST00000265619 UPF2Q9HAU5 1272 aaKnown RBP11□□□□□ -0.65
VAPB-201ENST00000265619 TRAK1Q9UPV9 953 aa11□□□□□ -0.65
VAPB-201ENST00000265619 UGGT1Q9NYU2 1555 aa10.99□□□□□ -0.65
VAPB-201ENST00000265619 DYNC1I1O14576 645 aa10.99□□□□□ -0.65
VAPB-201ENST00000265619 CD2BP2O95400 341 aaKnown RBP10.99□□□□□ -0.65
VAPB-201ENST00000265619 IPO4Q8TEX9 1081 aaKnown RBP10.99□□□□□ -0.65
VAPB-201ENST00000265619 ZFYVE16Q7Z3T8 1539 aa10.99□□□□□ -0.65
VAPB-201ENST00000265619 ZNF518AQ6AHZ1 1483 aa10.99□□□□□ -0.65
VAPB-201ENST00000265619 ISY1Q9ULR0 285 aaKnown RBP10.98□□□□□ -0.65
VAPB-201ENST00000265619 NOL7Q9UMY1 257 aaKnown RBP10.98□□□□□ -0.65
VAPB-201ENST00000265619 ZNF500O60304 480 aaPredicted RBP10.98□□□□□ -0.65
VAPB-201ENST00000265619 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.98□□□□□ -0.65
VAPB-201ENST00000265619 A2MP01023 1474 aa10.98□□□□□ -0.65
VAPB-201ENST00000265619 ABCA9Q8IUA7 1624 aa10.98□□□□□ -0.65
VAPB-201ENST00000265619 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
VAPB-201ENST00000265619 RBSNQ9H1K0 784 aa10.98□□□□□ -0.65
VAPB-201ENST00000265619 ERBINQ96RT1 1412 aa10.98□□□□□ -0.65
VAPB-201ENST00000265619 KCNA4P22459 653 aa10.97□□□□□ -0.65
VAPB-201ENST00000265619 PLA2R1Q13018 1463 aa10.97□□□□□ -0.65
VAPB-201ENST00000265619 RLBP1P12271 317 aa10.97□□□□□ -0.65
VAPB-201ENST00000265619 MPNDQ8N594 471 aa10.97□□□□□ -0.65
VAPB-201ENST00000265619 NCOA3Q9Y6Q9 1424 aa10.97□□□□□ -0.65
VAPB-201ENST00000265619 SSFA2P28290 1259 aa10.97□□□□□ -0.65
VAPB-201ENST00000265619 ADGRF5Q8IZF2 1346 aa10.96□□□□□ -0.65
VAPB-201ENST00000265619 RALGAPBQ86X10 1494 aa10.96□□□□□ -0.65
VAPB-201ENST00000265619 POGZQ7Z3K3 1410 aa10.96□□□□□ -0.66
VAPB-201ENST00000265619 TRMT2AQ8IZ69 625 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms