RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 POGKQ9P215 609 aa10.38□□□□□ -0.75
DEPDC1B-201ENST00000265036 MINK1Q8N4C8 1332 aaPredicted RBP10.38□□□□□ -0.75
DEPDC1B-201ENST00000265036 STAC3Q96MF2 364 aa10.36□□□□□ -0.75
DEPDC1B-201ENST00000265036 CADPS2Q86UW7 1296 aa10.36□□□□□ -0.75
DEPDC1B-201ENST00000265036 SLAIN2Q9P270 581 aa10.36□□□□□ -0.75
DEPDC1B-201ENST00000265036 RGPD8O14715 1765 aaPredicted RBP10.36□□□□□ -0.75
DEPDC1B-201ENST00000265036 MST1RQ04912 1400 aa10.36□□□□□ -0.75
DEPDC1B-201ENST00000265036 HSPA1LP34931 641 aa10.35□□□□□ -0.75
DEPDC1B-201ENST00000265036 CDC42BPGQ6DT37 1551 aa10.35□□□□□ -0.75
DEPDC1B-201ENST00000265036 CLSPNQ9HAW4 1339 aa10.35□□□□□ -0.75
DEPDC1B-201ENST00000265036 DLC1Q96QB1 1528 aa10.35□□□□□ -0.75
DEPDC1B-201ENST00000265036 DDX17Q92841 729 aaKnown RBP10.35□□□□□ -0.75
DEPDC1B-201ENST00000265036 FAM135BQ49AJ0 1406 aa10.35□□□□□ -0.75
DEPDC1B-201ENST00000265036 QRICH2Q9H0J4 1663 aa10.34□□□□□ -0.75
DEPDC1B-201ENST00000265036 RALGAPBQ86X10 1494 aa10.34□□□□□ -0.75
DEPDC1B-201ENST00000265036 NCOA3Q9Y6Q9 1424 aa10.34□□□□□ -0.75
DEPDC1B-201ENST00000265036 DCCP43146 1447 aa10.34□□□□□ -0.75
DEPDC1B-201ENST00000265036 CARD11Q9BXL7 1154 aa10.33□□□□□ -0.76
DEPDC1B-201ENST00000265036 FMN2Q9NZ56 1722 aa10.33□□□□□ -0.76
DEPDC1B-201ENST00000265036 ORAI2Q96SN7 254 aa10.33□□□□□ -0.76
DEPDC1B-201ENST00000265036 BRINP3Q76B58 766 aa10.32□□□□□ -0.76
DEPDC1B-201ENST00000265036 C1orf167Q5SNV9 1468 aa10.32□□□□□ -0.76
DEPDC1B-201ENST00000265036 PHLPP1O60346 1717 aa10.31□□□□□ -0.76
DEPDC1B-201ENST00000265036 XPCQ01831 940 aaPredicted RBP10.31□□□□□ -0.76
DEPDC1B-201ENST00000265036 CENPJQ9HC77 1338 aaPredicted RBP10.31□□□□□ -0.76
DEPDC1B-201ENST00000265036 ESCO1Q5FWF5 840 aa10.31□□□□□ -0.76
DEPDC1B-201ENST00000265036 USP32Q8NFA0 1604 aa10.31□□□□□ -0.76
DEPDC1B-201ENST00000265036 ADGRB2O60241 1585 aa10.3□□□□□ -0.76
DEPDC1B-201ENST00000265036 GPRASP1Q5JY77 1395 aa10.3□□□□□ -0.76
DEPDC1B-201ENST00000265036 PRR36Q9H6K5 1346 aa10.29□□□□□ -0.76
DEPDC1B-201ENST00000265036 TULP4Q9NRJ4 1543 aa10.29□□□□□ -0.76
DEPDC1B-201ENST00000265036 COL16A1Q07092 1604 aaPredicted RBP10.28□□□□□ -0.76
DEPDC1B-201ENST00000265036 NHSL1Q5SYE7 1610 aa10.28□□□□□ -0.76
DEPDC1B-201ENST00000265036 PMFBP1Q8TBY8 1022 aa10.28□□□□□ -0.76
DEPDC1B-201ENST00000265036 FOXO3O43524 673 aa10.28□□□□□ -0.76
DEPDC1B-201ENST00000265036 PLEKHG5O94827 1062 aa10.28□□□□□ -0.76
DEPDC1B-201ENST00000265036 SIRT1Q96EB6 747 aa10.28□□□□□ -0.76
DEPDC1B-201ENST00000265036 EIF3AQ14152 1382 aaKnown RBP10.28□□□□□ -0.76
DEPDC1B-201ENST00000265036 WASLO00401 505 aaPredicted RBP10.27□□□□□ -0.77
DEPDC1B-201ENST00000265036 ATP7BP35670 1465 aa10.27□□□□□ -0.77
DEPDC1B-201ENST00000265036 SRPK2P78362 688 aaKnown RBP10.27□□□□□ -0.77
DEPDC1B-201ENST00000265036 CABP2Q9NPB3 220 aa10.27□□□□□ -0.77
DEPDC1B-201ENST00000265036 USP47Q96K76 1375 aa10.27□□□□□ -0.77
DEPDC1B-201ENST00000265036 AHDC1Q5TGY3 1603 aaPredicted RBP10.26□□□□□ -0.77
DEPDC1B-201ENST00000265036 CDK19Q9BWU1 502 aa10.26□□□□□ -0.77
DEPDC1B-201ENST00000265036 ST20-MTHFSA0A0A6YYL1 179 aa10.25□□□□□ -0.77
DEPDC1B-201ENST00000265036 ITSN1Q15811 1721 aa10.25□□□□□ -0.77
DEPDC1B-201ENST00000265036 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
DEPDC1B-201ENST00000265036 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
DEPDC1B-201ENST00000265036 KIF1AQ12756 1690 aa10.24□□□□□ -0.77
DEPDC1B-201ENST00000265036 TOPAZ1Q8N9V7 1692 aa10.24□□□□□ -0.77
DEPDC1B-201ENST00000265036 NUDT16Q96DE0 195 aaKnown RBP10.24□□□□□ -0.77
DEPDC1B-201ENST00000265036 ANKARQ7Z5J8 1434 aa10.23□□□□□ -0.77
DEPDC1B-201ENST00000265036 LMOD2Q6P5Q4 547 aa10.22□□□□□ -0.77
DEPDC1B-201ENST00000265036 PXDNQ92626 1479 aa10.22□□□□□ -0.77
DEPDC1B-201ENST00000265036 PPIP5K1Q6PFW1 1433 aa10.22□□□□□ -0.77
DEPDC1B-201ENST00000265036 NPHP3Q7Z494 1330 aa10.22□□□□□ -0.77
DEPDC1B-201ENST00000265036 EVC2Q86UK5 1308 aa10.22□□□□□ -0.77
DEPDC1B-201ENST00000265036 NUTM2BA6NNL0 878 aaPredicted RBP10.21□□□□□ -0.77
DEPDC1B-201ENST00000265036 NUTM2EB1AL46 878 aaPredicted RBP10.21□□□□□ -0.77
DEPDC1B-201ENST00000265036 NUTM2AQ8IVF1 878 aaPredicted RBP10.21□□□□□ -0.77
DEPDC1B-201ENST00000265036 NGDNQ8NEJ9 315 aaKnown RBP10.21□□□□□ -0.77
DEPDC1B-201ENST00000265036 MED1Q15648 1581 aaPredicted RBP10.21□□□□□ -0.78
DEPDC1B-201ENST00000265036 DISP3Q9P2K9 1392 aa10.21□□□□□ -0.78
DEPDC1B-201ENST00000265036 TESK2Q96S53 571 aa10.21□□□□□ -0.78
DEPDC1B-201ENST00000265036 JCADQ9P266 1359 aa10.2□□□□□ -0.78
DEPDC1B-201ENST00000265036 SOS2Q07890 1332 aaPredicted RBP10.2□□□□□ -0.78
DEPDC1B-201ENST00000265036 SHPRHQ149N8 1683 aa10.2□□□□□ -0.78
DEPDC1B-201ENST00000265036 PSME1Q06323 249 aa10.19□□□□□ -0.78
DEPDC1B-201ENST00000265036 POLR3GLQ9BT43 218 aa10.19□□□□□ -0.78
DEPDC1B-201ENST00000265036 LRP6O75581 1613 aa10.19□□□□□ -0.78
DEPDC1B-201ENST00000265036 PAK3O75914 559 aaPredicted RBP10.19□□□□□ -0.78
DEPDC1B-201ENST00000265036 KRT28Q7Z3Y7 464 aa10.19□□□□□ -0.78
DEPDC1B-201ENST00000265036 CABP1Q9NZU7 370 aa10.19□□□□□ -0.78
DEPDC1B-201ENST00000265036 CCDC61Q9Y6R9 512 aa10.19□□□□□ -0.78
DEPDC1B-201ENST00000265036 SBNO2Q9Y2G9 1366 aa10.19□□□□□ -0.78
DEPDC1B-201ENST00000265036 ACEP12821 1306 aa10.19□□□□□ -0.78
DEPDC1B-201ENST00000265036 TMC1Q8TDI8 760 aa10.18□□□□□ -0.78
DEPDC1B-201ENST00000265036 PNPLA6Q8IY17 1366 aa10.18□□□□□ -0.78
DEPDC1B-201ENST00000265036 TRPM3Q9HCF6 1732 aaPredicted RBP10.18□□□□□ -0.78
DEPDC1B-201ENST00000265036 HSPA5P11021 654 aaKnown RBP10.18□□□□□ -0.78
DEPDC1B-201ENST00000265036 NUTM2GQ5VZR2 741 aa10.18□□□□□ -0.78
DEPDC1B-201ENST00000265036 LRRC59Q96AG4 307 aaKnown RBP10.18□□□□□ -0.78
DEPDC1B-201ENST00000265036 CABLES1Q8TDN4 633 aa10.17□□□□□ -0.78
DEPDC1B-201ENST00000265036 TNS3Q68CZ2 1445 aa10.17□□□□□ -0.78
DEPDC1B-201ENST00000265036 ADAMTS2O95450 1211 aa10.16□□□□□ -0.78
DEPDC1B-201ENST00000265036 EIF4G2P78344 907 aaKnown RBP eCLIP10.16□□□□□ -0.78
DEPDC1B-201ENST00000265036 SLC12A5Q9H2X9 1139 aa10.15□□□□□ -0.78
DEPDC1B-201ENST00000265036 ALS2Q96Q42 1657 aa10.15□□□□□ -0.78
DEPDC1B-201ENST00000265036 SPATA31A3Q5VYP0 1347 aa10.15□□□□□ -0.78
DEPDC1B-201ENST00000265036 ATAD2Q6PL18 1390 aa10.15□□□□□ -0.78
DEPDC1B-201ENST00000265036 MEX3CQ5U5Q3 659 aaKnown RBP10.15□□□□□ -0.78
DEPDC1B-201ENST00000265036 AKAP12Q02952 1782 aa10.15□□□□□ -0.79
DEPDC1B-201ENST00000265036 POLR3AO14802 1390 aaPredicted RBP10.15□□□□□ -0.79
DEPDC1B-201ENST00000265036 ABCA3Q99758 1704 aa10.14□□□□□ -0.79
DEPDC1B-201ENST00000265036 TMF1P82094 1093 aa10.14□□□□□ -0.79
DEPDC1B-201ENST00000265036 PHF23Q9BUL5 403 aaPredicted RBP10.14□□□□□ -0.79
DEPDC1B-201ENST00000265036 MYOM1P52179 1685 aa10.14□□□□□ -0.79
DEPDC1B-201ENST00000265036 PLEKHG3A1L390 1219 aa10.13□□□□□ -0.79
DEPDC1B-201ENST00000265036 HAP1P54257 671 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms