RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 GOLGA6L22H0YM25 854 aa24.86■■□□□ 1.57
CSPG5-201ENST00000264723 GCC2Q8IWJ2 1684 aa24.85■■□□□ 1.57
CSPG5-201ENST00000264723 CASC1Q6TDU7 716 aa24.84■■□□□ 1.57
CSPG5-201ENST00000264723 NUP160Q12769 1436 aa24.84■■□□□ 1.57
CSPG5-201ENST00000264723 CARD14Q9BXL6 1004 aa24.84■■□□□ 1.57
CSPG5-201ENST00000264723 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
CSPG5-201ENST00000264723 NSD3Q9BZ95 1437 aa24.83■■□□□ 1.57
CSPG5-201ENST00000264723 FBLN1P23142 703 aa24.83■■□□□ 1.57
CSPG5-201ENST00000264723 CSB-PGBD3P0DP91 1061 aa24.83■■□□□ 1.56
CSPG5-201ENST00000264723 PLCH2O75038 1416 aa24.83■■□□□ 1.56
CSPG5-201ENST00000264723 RARSP54136 660 aaKnown RBP24.82■■□□□ 1.56
CSPG5-201ENST00000264723 PRKAR2BP31323 418 aa24.82■■□□□ 1.56
CSPG5-201ENST00000264723 C22orf23Q9BZE7 217 aa24.82■■□□□ 1.56
CSPG5-201ENST00000264723 STK31Q9BXU1 1019 aa24.81■■□□□ 1.56
CSPG5-201ENST00000264723 GOLGA6L3A6NEY3 463 aa24.81■■□□□ 1.56
CSPG5-201ENST00000264723 L1TD1Q5T7N2 865 aaKnown RBP24.81■■□□□ 1.56
CSPG5-201ENST00000264723 NOB1Q9ULX3 412 aaKnown RBP24.81■■□□□ 1.56
CSPG5-201ENST00000264723 THUMPD2Q9BTF0 503 aaKnown RBP24.8■■□□□ 1.56
CSPG5-201ENST00000264723 FOXD4L5Q5VV16 416 aaPredicted RBP24.8■■□□□ 1.56
CSPG5-201ENST00000264723 FOXD4L4Q8WXT5 416 aaPredicted RBP24.8■■□□□ 1.56
CSPG5-201ENST00000264723 DDX19BQ9UMR2 479 aa24.8■■□□□ 1.56
CSPG5-201ENST00000264723 UHRF1BP1Q6BDS2 1440 aa24.8■■□□□ 1.56
CSPG5-201ENST00000264723 PBRM1Q86U86 1689 aa24.79■■□□□ 1.56
CSPG5-201ENST00000264723 LMOD3Q0VAK6 560 aa24.79■■□□□ 1.56
CSPG5-201ENST00000264723 NOL8Q76FK4 1167 aaKnown RBP24.78■■□□□ 1.56
CSPG5-201ENST00000264723 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.78■■□□□ 1.56
CSPG5-201ENST00000264723 C8orf34Q49A92 452 aa24.78■■□□□ 1.56
CSPG5-201ENST00000264723 NGEFQ8N5V2 710 aa24.78■■□□□ 1.56
CSPG5-201ENST00000264723 SEC24BO95487 1268 aa24.77■■□□□ 1.56
CSPG5-201ENST00000264723 A2MP01023 1474 aa24.77■■□□□ 1.56
CSPG5-201ENST00000264723 PCDHB15Q9Y5E8 787 aa24.76■■□□□ 1.55
CSPG5-201ENST00000264723 NOS1P29475 1434 aa24.75■■□□□ 1.55
CSPG5-201ENST00000264723 ZNF330Q9Y3S2 320 aaPredicted RBP24.74■■□□□ 1.55
CSPG5-201ENST00000264723 RLBP1P12271 317 aa24.74■■□□□ 1.55
CSPG5-201ENST00000264723 RRS1Q15050 365 aaKnown RBP24.73■■□□□ 1.55
CSPG5-201ENST00000264723 ASXL2Q76L83 1435 aa24.73■■□□□ 1.55
CSPG5-201ENST00000264723 NKTRP30414 1462 aaKnown RBP24.73■■□□□ 1.55
CSPG5-201ENST00000264723 NLRP6P59044 892 aa24.72■■□□□ 1.55
CSPG5-201ENST00000264723 TAOK2Q9UL54 1235 aa24.72■■□□□ 1.55
CSPG5-201ENST00000264723 ADGRL2O95490 1459 aa24.72■■□□□ 1.55
CSPG5-201ENST00000264723 CEP170Q5SW79 1584 aa24.72■■□□□ 1.55
CSPG5-201ENST00000264723 MVPQ14764 893 aaKnown RBP24.72■■□□□ 1.55
CSPG5-201ENST00000264723 SSH1Q8WYL5 1049 aa24.71■■□□□ 1.55
CSPG5-201ENST00000264723 ITSN2Q9NZM3 1697 aa24.71■■□□□ 1.55
CSPG5-201ENST00000264723 SCAF11Q99590 1463 aaKnown RBP24.7■■□□□ 1.55
CSPG5-201ENST00000264723 CEBPAP49715 358 aaPredicted RBP24.7■■□□□ 1.54
CSPG5-201ENST00000264723 RPGRIP1LQ68CZ1 1315 aa24.7■■□□□ 1.54
CSPG5-201ENST00000264723 FOXD4L6Q3SYB3 417 aaPredicted RBP24.7■■□□□ 1.54
CSPG5-201ENST00000264723 FOXD4L3Q6VB84 417 aaPredicted RBP24.7■■□□□ 1.54
CSPG5-201ENST00000264723 LRRIQ1Q96JM4 1722 aa24.69■■□□□ 1.54
CSPG5-201ENST00000264723 WDR63Q8IWG1 891 aa24.69■■□□□ 1.54
CSPG5-201ENST00000264723 EIF2S2P20042 333 aaKnown RBP24.68■■□□□ 1.54
CSPG5-201ENST00000264723 TMEM57Q8N5G2 664 aa24.68■■□□□ 1.54
CSPG5-201ENST00000264723 TMPOP42166 694 aaKnown RBP24.68■■□□□ 1.54
CSPG5-201ENST00000264723 BCORL1Q5H9F3 1711 aa24.68■■□□□ 1.54
CSPG5-201ENST00000264723 KCNJ4P48050 445 aa24.68■■□□□ 1.54
CSPG5-201ENST00000264723 GBP4Q96PP9 640 aa24.67■■□□□ 1.54
CSPG5-201ENST00000264723 ATF7IPQ6VMQ6 1270 aa24.67■■□□□ 1.54
CSPG5-201ENST00000264723 ARHGEF12Q9NZN5 1544 aa24.66■■□□□ 1.54
CSPG5-201ENST00000264723 PSME1Q06323 249 aa24.66■■□□□ 1.54
CSPG5-201ENST00000264723 COL17A1Q9UMD9 1497 aaPredicted RBP24.66■■□□□ 1.54
CSPG5-201ENST00000264723 C14orf93Q9H972 538 aaKnown RBP24.65■■□□□ 1.54
CSPG5-201ENST00000264723 CHMP5Q9NZZ3 219 aa24.65■■□□□ 1.54
CSPG5-201ENST00000264723 PLCB2Q00722 1185 aa24.65■■□□□ 1.54
CSPG5-201ENST00000264723 SULT6B1Q6IMI4 303 aa24.65■■□□□ 1.54
CSPG5-201ENST00000264723 RBM33Q96EV2 1170 aaKnown RBP24.64■■□□□ 1.53
CSPG5-201ENST00000264723 TRIM6-TRIM34B2RNG4 842 aa24.64■■□□□ 1.53
CSPG5-201ENST00000264723 KDM5CP41229 1560 aa24.63■■□□□ 1.53
CSPG5-201ENST00000264723 GNAI1P63096 354 aa24.62■■□□□ 1.53
CSPG5-201ENST00000264723 TRIM27P14373 513 aa24.61■■□□□ 1.53
CSPG5-201ENST00000264723 RTEL1-TNFRSF6BF6WH68 1400 aa24.61■■□□□ 1.53
CSPG5-201ENST00000264723 TBC1D2Q9BYX2 928 aa24.61■■□□□ 1.53
CSPG5-201ENST00000264723 MBD5Q9P267 1494 aa24.61■■□□□ 1.53
CSPG5-201ENST00000264723 DCTN1Q14203 1278 aa24.61■■□□□ 1.53
CSPG5-201ENST00000264723 KIF16BQ96L93 1317 aa24.6■■□□□ 1.53
CSPG5-201ENST00000264723 PTMAP06454 111 aaKnown RBP24.6■■□□□ 1.53
CSPG5-201ENST00000264723 KDM2BQ8NHM5 1336 aa24.6■■□□□ 1.53
CSPG5-201ENST00000264723 TSPYL4Q9UJ04 414 aa24.59■■□□□ 1.53
CSPG5-201ENST00000264723 NME9Q86XW9 330 aa24.59■■□□□ 1.53
CSPG5-201ENST00000264723 NUDT16Q96DE0 195 aaKnown RBP24.59■■□□□ 1.53
CSPG5-201ENST00000264723 TRAK2O60296 914 aa24.58■■□□□ 1.53
CSPG5-201ENST00000264723 TEFQ10587 303 aa24.58■■□□□ 1.53
CSPG5-201ENST00000264723 ABTB2Q8N961 1025 aa24.58■■□□□ 1.53
CSPG5-201ENST00000264723 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.53
CSPG5-201ENST00000264723 HMMRO75330 724 aa24.58■■□□□ 1.52
CSPG5-201ENST00000264723 DUOX2Q9NRD8 1548 aa24.57■■□□□ 1.52
CSPG5-201ENST00000264723 CCDC61Q9Y6R9 512 aa24.57■■□□□ 1.52
CSPG5-201ENST00000264723 DDX49Q9Y6V7 483 aaKnown RBP24.57■■□□□ 1.52
CSPG5-201ENST00000264723 MAGI2Q86UL8 1455 aa24.57■■□□□ 1.52
CSPG5-201ENST00000264723 FKBP5Q13451 457 aaPredicted RBP24.57■■□□□ 1.52
CSPG5-201ENST00000264723 EMILIN1Q9Y6C2 1016 aa24.56■■□□□ 1.52
CSPG5-201ENST00000264723 WDR7Q9Y4E6 1490 aa24.56■■□□□ 1.52
CSPG5-201ENST00000264723 GPRASP1Q5JY77 1395 aa24.56■■□□□ 1.52
CSPG5-201ENST00000264723 ASXL1Q8IXJ9 1541 aa24.56■■□□□ 1.52
CSPG5-201ENST00000264723 ABCC10Q5T3U5 1492 aa24.55■■□□□ 1.52
CSPG5-201ENST00000264723 ARID3AQ99856 593 aa24.55■■□□□ 1.52
CSPG5-201ENST00000264723 NAP1L2Q9ULW6 460 aaPredicted RBP24.54■■□□□ 1.52
CSPG5-201ENST00000264723 TWISTNBQ3B726 338 aaPredicted RBP24.53■■□□□ 1.52
CSPG5-201ENST00000264723 RILPL2Q969X0 211 aa24.53■■□□□ 1.52
CSPG5-201ENST00000264723 PLA2R1Q13018 1463 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms