RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
LCN1-201ENST00000263598 FNBP4Q8N3X1 1017 aaPredicted RBP13.48□□□□□ -0.25
LCN1-201ENST00000263598 FOXD1Q16676 465 aa13.47□□□□□ -0.25
LCN1-201ENST00000263598 LRPPRCP42704 1394 aaKnown RBP13.45□□□□□ -0.26
LCN1-201ENST00000263598 COL22A1Q8NFW1 1626 aaPredicted RBP13.45□□□□□ -0.26
LCN1-201ENST00000263598 ATRNO75882 1429 aa13.44□□□□□ -0.26
LCN1-201ENST00000263598 CDC42BPGQ6DT37 1551 aa13.44□□□□□ -0.26
LCN1-201ENST00000263598 PPLO60437 1756 aa13.43□□□□□ -0.26
LCN1-201ENST00000263598 FOXO3O43524 673 aa13.43□□□□□ -0.26
LCN1-201ENST00000263598 MYOM2P54296 1465 aa13.42□□□□□ -0.26
LCN1-201ENST00000263598 CCDC144AA2RUR9 1427 aa13.42□□□□□ -0.26
LCN1-201ENST00000263598 CCDC125Q86Z20 511 aa13.42□□□□□ -0.26
LCN1-201ENST00000263598 STK26Q9P289 416 aa13.42□□□□□ -0.26
LCN1-201ENST00000263598 PXDNQ92626 1479 aa13.42□□□□□ -0.26
LCN1-201ENST00000263598 ADGRF5Q8IZF2 1346 aa13.41□□□□□ -0.26
LCN1-201ENST00000263598 XPCQ01831 940 aaPredicted RBP13.41□□□□□ -0.26
LCN1-201ENST00000263598 RGL3Q3MIN7 710 aa13.41□□□□□ -0.26
LCN1-201ENST00000263598 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
LCN1-201ENST00000263598 ANKRD30BQ9BXX2 1392 aa13.41□□□□□ -0.26
LCN1-201ENST00000263598 NUTM2FA1L443 756 aa13.4□□□□□ -0.26
LCN1-201ENST00000263598 WAPLQ7Z5K2 1190 aa13.4□□□□□ -0.26
LCN1-201ENST00000263598 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
LCN1-201ENST00000263598 BCL9LQ86UU0 1499 aa13.4□□□□□ -0.26
LCN1-201ENST00000263598 TECPR2O15040 1411 aa13.39□□□□□ -0.27
LCN1-201ENST00000263598 ABCC11Q96J66 1382 aa13.39□□□□□ -0.27
LCN1-201ENST00000263598 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
LCN1-201ENST00000263598 SPATA31E1Q6ZUB1 1445 aa13.37□□□□□ -0.27
LCN1-201ENST00000263598 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
LCN1-201ENST00000263598 SRCAPQ6ZRS2 3230 aa13.36□□□□□ -0.27
LCN1-201ENST00000263598 UNC5CLQ8IV45 518 aa13.36□□□□□ -0.27
LCN1-201ENST00000263598 MPHOSPH9Q99550 1183 aa13.36□□□□□ -0.27
LCN1-201ENST00000263598 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
LCN1-201ENST00000263598 PLEKHH1Q9ULM0 1364 aa13.35□□□□□ -0.27
LCN1-201ENST00000263598 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
LCN1-201ENST00000263598 KRT28Q7Z3Y7 464 aa13.35□□□□□ -0.27
LCN1-201ENST00000263598 PIK3C2GO75747 1445 aa13.35□□□□□ -0.27
LCN1-201ENST00000263598 KNDC1Q76NI1 1749 aa13.34□□□□□ -0.27
LCN1-201ENST00000263598 YTHDC2Q9H6S0 1430 aaKnown RBP13.34□□□□□ -0.27
LCN1-201ENST00000263598 EP400Q96L91 3159 aa13.34□□□□□ -0.27
LCN1-201ENST00000263598 PSME1Q06323 249 aa13.34□□□□□ -0.27
LCN1-201ENST00000263598 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
LCN1-201ENST00000263598 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
LCN1-201ENST00000263598 SLIT2O94813 1529 aa13.34□□□□□ -0.27
LCN1-201ENST00000263598 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
LCN1-201ENST00000263598 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.33□□□□□ -0.28
LCN1-201ENST00000263598 FMN2Q9NZ56 1722 aa13.33□□□□□ -0.28
LCN1-201ENST00000263598 BLMP54132 1417 aaPredicted RBP13.32□□□□□ -0.28
LCN1-201ENST00000263598 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
LCN1-201ENST00000263598 IFT172Q9UG01 1749 aa13.32□□□□□ -0.28
LCN1-201ENST00000263598 SF3B2Q13435 895 aaKnown RBP13.31□□□□□ -0.28
LCN1-201ENST00000263598 C14orf93Q9H972 538 aaKnown RBP13.31□□□□□ -0.28
LCN1-201ENST00000263598 ACIN1Q9UKV3 1341 aaKnown RBP13.31□□□□□ -0.28
LCN1-201ENST00000263598 DHX57Q6P158 1386 aaKnown RBP13.31□□□□□ -0.28
LCN1-201ENST00000263598 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
LCN1-201ENST00000263598 GLI3P10071 1580 aa13.3□□□□□ -0.28
LCN1-201ENST00000263598 CCDC9Q9Y3X0 531 aaKnown RBP13.3□□□□□ -0.28
LCN1-201ENST00000263598 USP32Q8NFA0 1604 aa13.3□□□□□ -0.28
LCN1-201ENST00000263598 VPS72Q15906 364 aa13.29□□□□□ -0.28
LCN1-201ENST00000263598 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
LCN1-201ENST00000263598 SEPT12Q8IYM1 358 aa13.29□□□□□ -0.28
LCN1-201ENST00000263598 SBNO1A3KN83 1393 aa13.29□□□□□ -0.28
LCN1-201ENST00000263598 ARHGEF10O15013 1369 aa13.29□□□□□ -0.28
LCN1-201ENST00000263598 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
LCN1-201ENST00000263598 CFAP70Q5T0N1 1121 aa13.28□□□□□ -0.28
LCN1-201ENST00000263598 CABLES1Q8TDN4 633 aa13.28□□□□□ -0.28
LCN1-201ENST00000263598 PRAM1Q96QH2 718 aa13.28□□□□□ -0.28
LCN1-201ENST00000263598 SAFB2Q14151 953 aaKnown RBP eCLIP13.27□□□□□ -0.29
LCN1-201ENST00000263598 POGKQ9P215 609 aa13.27□□□□□ -0.29
LCN1-201ENST00000263598 NRXN1Q9ULB1 1477 aa13.27□□□□□ -0.29
LCN1-201ENST00000263598 ONECUT3O60422 494 aaPredicted RBP13.26□□□□□ -0.29
LCN1-201ENST00000263598 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
LCN1-201ENST00000263598 DEFB132Q7Z7B7 95 aa13.25□□□□□ -0.29
LCN1-201ENST00000263598 ANKARQ7Z5J8 1434 aa13.24□□□□□ -0.29
LCN1-201ENST00000263598 A0A0G2JS52 829 aa13.24□□□□□ -0.29
LCN1-201ENST00000263598 MYT1Q01538 1121 aa13.24□□□□□ -0.29
LCN1-201ENST00000263598 PMFBP1Q8TBY8 1022 aa13.24□□□□□ -0.29
LCN1-201ENST00000263598 NWD2Q9ULI1 1742 aa13.24□□□□□ -0.29
LCN1-201ENST00000263598 FAM83GA6ND36 823 aa13.23□□□□□ -0.29
LCN1-201ENST00000263598 DLC1Q96QB1 1528 aa13.23□□□□□ -0.29
LCN1-201ENST00000263598 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
LCN1-201ENST00000263598 EIF3AQ14152 1382 aaKnown RBP13.22□□□□□ -0.29
LCN1-201ENST00000263598 GPRASP1Q5JY77 1395 aa13.22□□□□□ -0.29
LCN1-201ENST00000263598 PLCH1Q4KWH8 1693 aa13.22□□□□□ -0.29
LCN1-201ENST00000263598 BRWD3Q6RI45 1802 aa13.22□□□□□ -0.29
LCN1-201ENST00000263598 BAG6P46379 1132 aa13.21□□□□□ -0.29
LCN1-201ENST00000263598 BTG4Q9NY30 223 aa13.21□□□□□ -0.29
LCN1-201ENST00000263598 ABCA3Q99758 1704 aa13.2□□□□□ -0.3
LCN1-201ENST00000263598 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
LCN1-201ENST00000263598 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
LCN1-201ENST00000263598 ADGRB2O60241 1585 aa13.2□□□□□ -0.3
LCN1-201ENST00000263598 HIRIP3Q9BW71 556 aaPredicted RBP13.19□□□□□ -0.3
LCN1-201ENST00000263598 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
LCN1-201ENST00000263598 NGDNQ8NEJ9 315 aaKnown RBP13.18□□□□□ -0.3
LCN1-201ENST00000263598 ADGRB1O14514 1584 aa13.17□□□□□ -0.3
LCN1-201ENST00000263598 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
LCN1-201ENST00000263598 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
LCN1-201ENST00000263598 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
LCN1-201ENST00000263598 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
LCN1-201ENST00000263598 TULP4Q9NRJ4 1543 aa13.16□□□□□ -0.3
LCN1-201ENST00000263598 COL14A1Q05707 1796 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms