RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.18■■■■□ 3.06
SCN1B-201ENST00000262631 TMEM94Q12767 1356 aa34.18■■■■□ 3.06
SCN1B-201ENST00000262631 LRRC7Q96NW7 1537 aa34.16■■■■□ 3.06
SCN1B-201ENST00000262631 LTBP4Q8N2S1 1624 aa34.14■■■■□ 3.06
SCN1B-201ENST00000262631 C11orf95C9JLR9 678 aaPredicted RBP34.14■■■■□ 3.06
SCN1B-201ENST00000262631 DISP3Q9P2K9 1392 aa34.13■■■■□ 3.05
SCN1B-201ENST00000262631 TULP4Q9NRJ4 1543 aa34.11■■■■□ 3.05
SCN1B-201ENST00000262631 NALCNQ8IZF0 1738 aa34.09■■■■□ 3.05
SCN1B-201ENST00000262631 ADGRL3Q9HAR2 1447 aa34.09■■■■□ 3.05
SCN1B-201ENST00000262631 C14orf37Q86TY3 774 aa34.09■■■■□ 3.05
SCN1B-201ENST00000262631 TMF1P82094 1093 aa34.08■■■■□ 3.05
SCN1B-201ENST00000262631 ADGRB2O60241 1585 aa34.06■■■■□ 3.04
SCN1B-201ENST00000262631 NCOA3Q9Y6Q9 1424 aa34.06■■■■□ 3.04
SCN1B-201ENST00000262631 XIRP1Q702N8 1843 aaKnown RBP34.06■■■■□ 3.04
SCN1B-201ENST00000262631 EVC2Q86UK5 1308 aa34.05■■■■□ 3.04
SCN1B-201ENST00000262631 ZNF316A6NFI3 1004 aaPredicted RBP34.04■■■■□ 3.04
SCN1B-201ENST00000262631 WASLO00401 505 aaPredicted RBP34.04■■■■□ 3.04
SCN1B-201ENST00000262631 CDK19Q9BWU1 502 aa34.03■■■■□ 3.04
SCN1B-201ENST00000262631 SLC24A1O60721 1099 aa34.03■■■■□ 3.04
SCN1B-201ENST00000262631 C19orf44Q9H6X5 657 aa34.02■■■■□ 3.04
SCN1B-201ENST00000262631 CABP2Q9NPB3 220 aa34.01■■■■□ 3.04
SCN1B-201ENST00000262631 KIF7Q2M1P5 1343 aa34.01■■■■□ 3.03
SCN1B-201ENST00000262631 WASHC2AQ641Q2 1341 aa34.01■■■■□ 3.03
SCN1B-201ENST00000262631 SRPK2P78362 688 aaKnown RBP33.99■■■■□ 3.03
SCN1B-201ENST00000262631 CDC42BPGQ6DT37 1551 aa33.98■■■■□ 3.03
SCN1B-201ENST00000262631 NUTM2FA1L443 756 aa33.96■■■■□ 3.03
SCN1B-201ENST00000262631 MSH6P52701 1360 aa33.96■■■■□ 3.03
SCN1B-201ENST00000262631 CCDC7Q96M83 1385 aa33.96■■■■□ 3.03
SCN1B-201ENST00000262631 POLR3GLQ9BT43 218 aa33.96■■■■□ 3.03
SCN1B-201ENST00000262631 PRR36Q9H6K5 1346 aa33.93■■■■□ 3.02
SCN1B-201ENST00000262631 CDCA8Q53HL2 280 aa33.93■■■■□ 3.02
SCN1B-201ENST00000262631 DCCP43146 1447 aa33.91■■■■□ 3.02
SCN1B-201ENST00000262631 ATF3P18847 181 aa33.9■■■■□ 3.02
SCN1B-201ENST00000262631 ATP7BP35670 1465 aa33.89■■■■□ 3.02
SCN1B-201ENST00000262631 FMN2Q9NZ56 1722 aa33.89■■■■□ 3.02
SCN1B-201ENST00000262631 NUDT16Q96DE0 195 aaKnown RBP33.89■■■■□ 3.02
SCN1B-201ENST00000262631 PUS7Q96PZ0 661 aaKnown RBP33.89■■■■□ 3.02
SCN1B-201ENST00000262631 USP32Q8NFA0 1604 aa33.87■■■■□ 3.01
SCN1B-201ENST00000262631 CADPS2Q86UW7 1296 aa33.87■■■■□ 3.01
SCN1B-201ENST00000262631 ATAD2Q6PL18 1390 aa33.85■■■■□ 3.01
SCN1B-201ENST00000262631 MST1RQ04912 1400 aa33.83■■■■□ 3.01
SCN1B-201ENST00000262631 ANKARQ7Z5J8 1434 aa33.83■■■■□ 3.01
SCN1B-201ENST00000262631 CCDC61Q9Y6R9 512 aa33.82■■■■□ 3
SCN1B-201ENST00000262631 SLC12A5Q9H2X9 1139 aa33.81■■■■□ 3
SCN1B-201ENST00000262631 TMC1Q8TDI8 760 aa33.8■■■■□ 3
SCN1B-201ENST00000262631 C1orf167Q5SNV9 1468 aa33.8■■■■□ 3
SCN1B-201ENST00000262631 CABP1Q9NZU7 370 aa33.8■■■■□ 3
SCN1B-201ENST00000262631 MYOM1P52179 1685 aa33.79■■■■□ 3
SCN1B-201ENST00000262631 CERKQ8TCT0 537 aa33.78■■■■□ 3
SCN1B-201ENST00000262631 PPIP5K1Q6PFW1 1433 aa33.78■■■■□ 3
SCN1B-201ENST00000262631 RGPD8O14715 1765 aaPredicted RBP33.77■■■■□ 3
SCN1B-201ENST00000262631 TOPAZ1Q8N9V7 1692 aa33.76■■■□□ 2.99
SCN1B-201ENST00000262631 ORAI2Q96SN7 254 aa33.75■■■□□ 2.99
SCN1B-201ENST00000262631 SLAIN2Q9P270 581 aa33.75■■■□□ 2.99
SCN1B-201ENST00000262631 ESCO1Q5FWF5 840 aa33.74■■■□□ 2.99
SCN1B-201ENST00000262631 DDX10Q13206 875 aaKnown RBP33.74■■■□□ 2.99
SCN1B-201ENST00000262631 PMFBP1Q8TBY8 1022 aa33.72■■■□□ 2.99
SCN1B-201ENST00000262631 NINLQ9Y2I6 1382 aa33.71■■■□□ 2.99
SCN1B-201ENST00000262631 IQSEC2Q5JU85 1478 aa33.71■■■□□ 2.99
SCN1B-201ENST00000262631 PLEKHG3A1L390 1219 aa33.7■■■□□ 2.99
SCN1B-201ENST00000262631 CD163L1Q9NR16 1453 aa33.7■■■□□ 2.98
SCN1B-201ENST00000262631 ITSN1Q15811 1721 aa33.68■■■□□ 2.98
SCN1B-201ENST00000262631 PHF8Q9UPP1 1060 aa33.68■■■□□ 2.98
SCN1B-201ENST00000262631 PANK3Q9H999 370 aa33.67■■■□□ 2.98
SCN1B-201ENST00000262631 ACEP12821 1306 aa33.66■■■□□ 2.98
SCN1B-201ENST00000262631 A0A1W2PP64 1363 aa33.65■■■□□ 2.98
SCN1B-201ENST00000262631 BRINP3Q76B58 766 aa33.64■■■□□ 2.98
SCN1B-201ENST00000262631 ANKRD36BQ8N2N9 1353 aa33.64■■■□□ 2.98
SCN1B-201ENST00000262631 CPSF1Q10570 1443 aaKnown RBP33.63■■■□□ 2.97
SCN1B-201ENST00000262631 POLR3AO14802 1390 aaPredicted RBP33.63■■■□□ 2.97
SCN1B-201ENST00000262631 UBAP1LF5GYI3 381 aa33.61■■■□□ 2.97
SCN1B-201ENST00000262631 NGDNQ8NEJ9 315 aaKnown RBP33.61■■■□□ 2.97
SCN1B-201ENST00000262631 CARD14Q9BXL6 1004 aa33.61■■■□□ 2.97
SCN1B-201ENST00000262631 TERF2IPQ9NYB0 399 aa33.61■■■□□ 2.97
SCN1B-201ENST00000262631 TOM1O60784 492 aa33.61■■■□□ 2.97
SCN1B-201ENST00000262631 FOXO3O43524 673 aa33.6■■■□□ 2.97
SCN1B-201ENST00000262631 HDGFL2Q7Z4V5 671 aaPredicted RBP33.58■■■□□ 2.97
SCN1B-201ENST00000262631 DDX17Q92841 729 aaKnown RBP33.58■■■□□ 2.97
SCN1B-201ENST00000262631 KIF1AQ12756 1690 aa33.56■■■□□ 2.96
SCN1B-201ENST00000262631 KTN1Q86UP2 1357 aaKnown RBP33.56■■■□□ 2.96
SCN1B-201ENST00000262631 PER1O15534 1290 aaPredicted RBP33.54■■■□□ 2.96
SCN1B-201ENST00000262631 PIP4K2BP78356 416 aa33.54■■■□□ 2.96
SCN1B-201ENST00000262631 ZNF692Q9BU19 519 aaPredicted RBP33.54■■■□□ 2.96
SCN1B-201ENST00000262631 XPCQ01831 940 aaPredicted RBP33.53■■■□□ 2.96
SCN1B-201ENST00000262631 USP6P35125 1406 aa33.53■■■□□ 2.96
SCN1B-201ENST00000262631 AKAP12Q02952 1782 aa33.53■■■□□ 2.96
SCN1B-201ENST00000262631 NSD3Q9BZ95 1437 aa33.52■■■□□ 2.96
SCN1B-201ENST00000262631 ROBO1Q9Y6N7 1651 aa33.52■■■□□ 2.96
SCN1B-201ENST00000262631 PSME1Q06323 249 aa33.5■■■□□ 2.95
SCN1B-201ENST00000262631 MON2Q7Z3U7 1717 aa33.49■■■□□ 2.95
SCN1B-201ENST00000262631 SSH2Q76I76 1423 aa33.48■■■□□ 2.95
SCN1B-201ENST00000262631 NPHP3Q7Z494 1330 aa33.48■■■□□ 2.95
SCN1B-201ENST00000262631 EDC4Q6P2E9 1401 aaKnown RBP33.47■■■□□ 2.95
SCN1B-201ENST00000262631 SCAF1Q9H7N4 1312 aaKnown RBP33.47■■■□□ 2.95
SCN1B-201ENST00000262631 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.46■■■□□ 2.95
SCN1B-201ENST00000262631 KRT28Q7Z3Y7 464 aa33.45■■■□□ 2.95
SCN1B-201ENST00000262631 KNSTRNQ9Y448 316 aa33.45■■■□□ 2.95
SCN1B-201ENST00000262631 NRKQ7Z2Y5 1582 aa33.45■■■□□ 2.94
SCN1B-201ENST00000262631 PXDNQ92626 1479 aa33.44■■■□□ 2.94
SCN1B-201ENST00000262631 TTC21BQ7Z4L5 1316 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms