RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 NPC1L1Q9UHC9 1359 aa25.03■■□□□ 1.6
SMAD7-201ENST00000262158 NEFMP07197 916 aa25.02■■□□□ 1.6
SMAD7-201ENST00000262158 GGNBP2Q9H3C7 697 aa25.02■■□□□ 1.6
SMAD7-201ENST00000262158 C8orf34Q49A92 452 aa25.01■■□□□ 1.6
SMAD7-201ENST00000262158 MINK1Q8N4C8 1332 aaPredicted RBP25.01■■□□□ 1.59
SMAD7-201ENST00000262158 POGZQ7Z3K3 1410 aa25■■□□□ 1.59
SMAD7-201ENST00000262158 U2AF1L5P0DN76 240 aaPredicted RBP25■■□□□ 1.59
SMAD7-201ENST00000262158 U2AF1Q01081 240 aaKnown RBP eCLIP25■■□□□ 1.59
SMAD7-201ENST00000262158 ADGRB3O60242 1522 aa25■■□□□ 1.59
SMAD7-201ENST00000262158 IFT172Q9UG01 1749 aa25■■□□□ 1.59
SMAD7-201ENST00000262158 RLBP1P12271 317 aa25■■□□□ 1.59
SMAD7-201ENST00000262158 FBXO31Q5XUX0 539 aaPredicted RBP25■■□□□ 1.59
SMAD7-201ENST00000262158 SRPK2P78362 688 aaKnown RBP24.99■■□□□ 1.59
SMAD7-201ENST00000262158 KIAA1210Q9ULL0 1709 aa24.98■■□□□ 1.59
SMAD7-201ENST00000262158 U2SURPO15042 1029 aaKnown RBP24.97■■□□□ 1.59
SMAD7-201ENST00000262158 NRXN1Q9ULB1 1477 aa24.97■■□□□ 1.59
SMAD7-201ENST00000262158 TSR2Q969E8 191 aaKnown RBP24.97■■□□□ 1.59
SMAD7-201ENST00000262158 QRICH2Q9H0J4 1663 aa24.96■■□□□ 1.59
SMAD7-201ENST00000262158 ADGRB1O14514 1584 aa24.95■■□□□ 1.58
SMAD7-201ENST00000262158 SIGLEC1Q9BZZ2 1709 aa24.95■■□□□ 1.58
SMAD7-201ENST00000262158 RUNDC1Q96C34 613 aa24.94■■□□□ 1.58
SMAD7-201ENST00000262158 POLR3AO14802 1390 aaPredicted RBP24.94■■□□□ 1.58
SMAD7-201ENST00000262158 YEATS2Q9ULM3 1422 aa24.93■■□□□ 1.58
SMAD7-201ENST00000262158 CGNL1Q0VF96 1302 aa24.93■■□□□ 1.58
SMAD7-201ENST00000262158 SEC24BO95487 1268 aa24.93■■□□□ 1.58
SMAD7-201ENST00000262158 FAM161AQ3B820 660 aa24.92■■□□□ 1.58
SMAD7-201ENST00000262158 ABCC3O15438 1527 aa24.92■■□□□ 1.58
SMAD7-201ENST00000262158 RARSP54136 660 aaKnown RBP24.91■■□□□ 1.58
SMAD7-201ENST00000262158 CYB5RLQ6IPT4 315 aa24.9■■□□□ 1.58
SMAD7-201ENST00000262158 PPLO60437 1756 aa24.9■■□□□ 1.58
SMAD7-201ENST00000262158 EVC2Q86UK5 1308 aa24.9■■□□□ 1.58
SMAD7-201ENST00000262158 PRAM1Q96QH2 718 aa24.89■■□□□ 1.58
SMAD7-201ENST00000262158 PPM1GO15355 546 aaPredicted RBP24.89■■□□□ 1.58
SMAD7-201ENST00000262158 PCDHB15Q9Y5E8 787 aa24.89■■□□□ 1.58
SMAD7-201ENST00000262158 VGFO15240 615 aaPredicted RBP24.89■■□□□ 1.57
SMAD7-201ENST00000262158 MLECQ14165 292 aa24.88■■□□□ 1.57
SMAD7-201ENST00000262158 SHPRHQ149N8 1683 aa24.88■■□□□ 1.57
SMAD7-201ENST00000262158 SBNO2Q9Y2G9 1366 aa24.88■■□□□ 1.57
SMAD7-201ENST00000262158 LMTK2Q8IWU2 1503 aa24.88■■□□□ 1.57
SMAD7-201ENST00000262158 TULP4Q9NRJ4 1543 aa24.88■■□□□ 1.57
SMAD7-201ENST00000262158 HECW2Q9P2P5 1572 aa24.87■■□□□ 1.57
SMAD7-201ENST00000262158 A0A1W2PP64 1363 aa24.86■■□□□ 1.57
SMAD7-201ENST00000262158 GLI2P10070 1586 aa24.86■■□□□ 1.57
SMAD7-201ENST00000262158 MLH3Q9UHC1 1453 aa24.85■■□□□ 1.57
SMAD7-201ENST00000262158 POGKQ9P215 609 aa24.85■■□□□ 1.57
SMAD7-201ENST00000262158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.84■■□□□ 1.57
SMAD7-201ENST00000262158 SLC24A1O60721 1099 aa24.84■■□□□ 1.57
SMAD7-201ENST00000262158 CFAP53Q96M91 514 aa24.84■■□□□ 1.57
SMAD7-201ENST00000262158 MYO3AQ8NEV4 1616 aa24.84■■□□□ 1.57
SMAD7-201ENST00000262158 WAPLQ7Z5K2 1190 aa24.82■■□□□ 1.56
SMAD7-201ENST00000262158 CAMSAP1Q5T5Y3 1602 aa24.81■■□□□ 1.56
SMAD7-201ENST00000262158 STAG3Q9UJ98 1225 aa24.81■■□□□ 1.56
SMAD7-201ENST00000262158 NEURL4Q96JN8 1562 aa24.81■■□□□ 1.56
SMAD7-201ENST00000262158 SETBP1Q9Y6X0 1596 aa24.81■■□□□ 1.56
SMAD7-201ENST00000262158 DAXXQ9UER7 740 aaPredicted RBP24.8■■□□□ 1.56
SMAD7-201ENST00000262158 ZC3H13Q5T200 1668 aaKnown RBP24.8■■□□□ 1.56
SMAD7-201ENST00000262158 ANKRD36BQ8N2N9 1353 aa24.79■■□□□ 1.56
SMAD7-201ENST00000262158 FYB1O15117 783 aa24.79■■□□□ 1.56
SMAD7-201ENST00000262158 EXOSC9Q06265 439 aaKnown RBP24.79■■□□□ 1.56
SMAD7-201ENST00000262158 CABP1Q9NZU7 370 aa24.79■■□□□ 1.56
SMAD7-201ENST00000262158 NEXMIFQ5QGS0 1516 aa24.79■■□□□ 1.56
SMAD7-201ENST00000262158 RPGRIP1LQ68CZ1 1315 aa24.79■■□□□ 1.56
SMAD7-201ENST00000262158 PDE3AQ14432 1141 aa24.78■■□□□ 1.56
SMAD7-201ENST00000262158 MYO5BQ9ULV0 1848 aa24.77■■□□□ 1.56
SMAD7-201ENST00000262158 RTN4Q9NQC3 1192 aaKnown RBP24.77■■□□□ 1.56
SMAD7-201ENST00000262158 IQSEC2Q5JU85 1478 aa24.76■■□□□ 1.55
SMAD7-201ENST00000262158 DDRGK1Q96HY6 314 aa24.76■■□□□ 1.55
SMAD7-201ENST00000262158 NFKBIBQ15653 356 aa24.75■■□□□ 1.55
SMAD7-201ENST00000262158 PHF23Q9BUL5 403 aaPredicted RBP24.75■■□□□ 1.55
SMAD7-201ENST00000262158 NCKAP5LQ9HCH0 1330 aa24.75■■□□□ 1.55
SMAD7-201ENST00000262158 ARHGEF28Q8N1W1 1705 aaKnown RBP24.75■■□□□ 1.55
SMAD7-201ENST00000262158 DIP2CQ9Y2E4 1556 aa24.74■■□□□ 1.55
SMAD7-201ENST00000262158 THUMPD2Q9BTF0 503 aaKnown RBP24.74■■□□□ 1.55
SMAD7-201ENST00000262158 CDK19Q9BWU1 502 aa24.74■■□□□ 1.55
SMAD7-201ENST00000262158 USP19O94966 1318 aa24.73■■□□□ 1.55
SMAD7-201ENST00000262158 ZRANB1Q9UGI0 708 aa24.73■■□□□ 1.55
SMAD7-201ENST00000262158 TRIM35Q9UPQ4 493 aa24.73■■□□□ 1.55
SMAD7-201ENST00000262158 PDZRN3Q9UPQ7 1066 aa24.73■■□□□ 1.55
SMAD7-201ENST00000262158 IL27Q8NEV9 243 aa24.72■■□□□ 1.55
SMAD7-201ENST00000262158 SMC4Q9NTJ3 1288 aa24.72■■□□□ 1.55
SMAD7-201ENST00000262158 PIK3C2BO00750 1634 aa24.72■■□□□ 1.55
SMAD7-201ENST00000262158 TMPOP42166 694 aaKnown RBP24.72■■□□□ 1.55
SMAD7-201ENST00000262158 WDR63Q8IWG1 891 aa24.72■■□□□ 1.55
SMAD7-201ENST00000262158 HMOX1P09601 288 aa24.71■■□□□ 1.55
SMAD7-201ENST00000262158 FAM69CQ0P6D2 419 aa24.7■■□□□ 1.54
SMAD7-201ENST00000262158 FTSJ3Q8IY81 847 aaKnown RBP24.7■■□□□ 1.54
SMAD7-201ENST00000262158 PLEKHF1Q96S99 279 aa24.7■■□□□ 1.54
SMAD7-201ENST00000262158 FRAT2O75474 233 aaPredicted RBP24.7■■□□□ 1.54
SMAD7-201ENST00000262158 RIPK4P57078 832 aa24.7■■□□□ 1.54
SMAD7-201ENST00000262158 SSH1Q8WYL5 1049 aa24.7■■□□□ 1.54
SMAD7-201ENST00000262158 SPRYD3Q8NCJ5 442 aa24.69■■□□□ 1.54
SMAD7-201ENST00000262158 SLKQ9H2G2 1235 aaPredicted RBP24.68■■□□□ 1.54
SMAD7-201ENST00000262158 ELL2O00472 640 aaPredicted RBP24.67■■□□□ 1.54
SMAD7-201ENST00000262158 MYH16Q9H6N6 1097 aa24.67■■□□□ 1.54
SMAD7-201ENST00000262158 MAPK8IP3Q9UPT6 1336 aa24.67■■□□□ 1.54
SMAD7-201ENST00000262158 ITPRIPQ8IWB1 547 aa24.67■■□□□ 1.54
SMAD7-201ENST00000262158 TRIM27P14373 513 aa24.66■■□□□ 1.54
SMAD7-201ENST00000262158 SLC52A1Q9NWF4 448 aa24.66■■□□□ 1.54
SMAD7-201ENST00000262158 NOB1Q9ULX3 412 aaKnown RBP24.65■■□□□ 1.54
SMAD7-201ENST00000262158 ABCC11Q96J66 1382 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms