RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 ASXL1Q8IXJ9 1541 aa11.47□□□□□ -0.57
CALCOCO2-201ENST00000258947 LAMC1P11047 1609 aa11.47□□□□□ -0.57
CALCOCO2-201ENST00000258947 ZC3H13Q5T200 1668 aaKnown RBP11.47□□□□□ -0.57
CALCOCO2-201ENST00000258947 LTKP29376 864 aa11.46□□□□□ -0.57
CALCOCO2-201ENST00000258947 ATAD2Q6PL18 1390 aa11.46□□□□□ -0.57
CALCOCO2-201ENST00000258947 PREX1Q8TCU6 1659 aa11.46□□□□□ -0.57
CALCOCO2-201ENST00000258947 B4GALNT3Q6L9W6 998 aa11.46□□□□□ -0.57
CALCOCO2-201ENST00000258947 A2ML1A8K2U0 1454 aa11.46□□□□□ -0.58
CALCOCO2-201ENST00000258947 NEXMIFQ5QGS0 1516 aa11.46□□□□□ -0.58
CALCOCO2-201ENST00000258947 PIK3C2BO00750 1634 aa11.45□□□□□ -0.58
CALCOCO2-201ENST00000258947 SBNO2Q9Y2G9 1366 aa11.45□□□□□ -0.58
CALCOCO2-201ENST00000258947 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
CALCOCO2-201ENST00000258947 PLEKHH1Q9ULM0 1364 aa11.45□□□□□ -0.58
CALCOCO2-201ENST00000258947 KDM5AP29375 1690 aaKnown RBP11.45□□□□□ -0.58
CALCOCO2-201ENST00000258947 RCAN3Q9UKA8 241 aa11.45□□□□□ -0.58
CALCOCO2-201ENST00000258947 NCKAP5LQ9HCH0 1330 aa11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 TMEM2Q9UHN6 1383 aa11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 IQGAP1P46940 1657 aa11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 RBM33Q96EV2 1170 aaKnown RBP11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 CCDC136Q96JN2 1154 aa11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 NUDT16Q96DE0 195 aaKnown RBP11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 AMOTL2Q9Y2J4 779 aa11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 METP08581 1390 aa11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 WASLO00401 505 aaPredicted RBP11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 NGDNQ8NEJ9 315 aaKnown RBP11.44□□□□□ -0.58
CALCOCO2-201ENST00000258947 MAPK8IP3Q9UPT6 1336 aa11.43□□□□□ -0.58
CALCOCO2-201ENST00000258947 PMFBP1Q8TBY8 1022 aa11.43□□□□□ -0.58
CALCOCO2-201ENST00000258947 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
CALCOCO2-201ENST00000258947 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
CALCOCO2-201ENST00000258947 PPLO60437 1756 aa11.42□□□□□ -0.58
CALCOCO2-201ENST00000258947 ZBTB7CA1YPR0 619 aa11.42□□□□□ -0.58
CALCOCO2-201ENST00000258947 FBLN1P23142 703 aa11.42□□□□□ -0.58
CALCOCO2-201ENST00000258947 A0A1W2PP64 1363 aa11.42□□□□□ -0.58
CALCOCO2-201ENST00000258947 ANKRD36BQ8N2N9 1353 aa11.42□□□□□ -0.58
CALCOCO2-201ENST00000258947 ZFYVE9O95405 1425 aa11.42□□□□□ -0.58
CALCOCO2-201ENST00000258947 PAK3O75914 559 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO2-201ENST00000258947 PDE3BQ13370 1112 aa11.42□□□□□ -0.58
CALCOCO2-201ENST00000258947 CCDC61Q9Y6R9 512 aa11.41□□□□□ -0.58
CALCOCO2-201ENST00000258947 LRPPRCP42704 1394 aaKnown RBP11.41□□□□□ -0.58
CALCOCO2-201ENST00000258947 NEURL4Q96JN8 1562 aa11.41□□□□□ -0.58
CALCOCO2-201ENST00000258947 PPP4R2Q9NY27 417 aa11.41□□□□□ -0.58
CALCOCO2-201ENST00000258947 ANKLE2Q86XL3 938 aa11.41□□□□□ -0.58
CALCOCO2-201ENST00000258947 COG3Q96JB2 828 aa11.41□□□□□ -0.58
CALCOCO2-201ENST00000258947 ADGRB1O14514 1584 aa11.41□□□□□ -0.58
CALCOCO2-201ENST00000258947 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
CALCOCO2-201ENST00000258947 KIAA1210Q9ULL0 1709 aa11.4□□□□□ -0.58
CALCOCO2-201ENST00000258947 TMEM131LA2VDJ0 1609 aa11.4□□□□□ -0.58
CALCOCO2-201ENST00000258947 SETBP1Q9Y6X0 1596 aa11.4□□□□□ -0.58
CALCOCO2-201ENST00000258947 PLIN1O60240 522 aa11.4□□□□□ -0.58
CALCOCO2-201ENST00000258947 FYB1O15117 783 aa11.39□□□□□ -0.59
CALCOCO2-201ENST00000258947 MYO5BQ9ULV0 1848 aa11.39□□□□□ -0.59
CALCOCO2-201ENST00000258947 NME9Q86XW9 330 aa11.39□□□□□ -0.59
CALCOCO2-201ENST00000258947 ALKQ9UM73 1620 aa11.39□□□□□ -0.59
CALCOCO2-201ENST00000258947 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
CALCOCO2-201ENST00000258947 SMG6Q86US8 1419 aaKnown RBP11.38□□□□□ -0.59
CALCOCO2-201ENST00000258947 LAS1LQ9Y4W2 734 aaKnown RBP11.38□□□□□ -0.59
CALCOCO2-201ENST00000258947 REREQ9P2R6 1566 aa11.38□□□□□ -0.59
CALCOCO2-201ENST00000258947 PUS7Q96PZ0 661 aaKnown RBP11.38□□□□□ -0.59
CALCOCO2-201ENST00000258947 ABCC11Q96J66 1382 aa11.38□□□□□ -0.59
CALCOCO2-201ENST00000258947 DIAPH1O60610 1272 aaKnown RBP11.37□□□□□ -0.59
CALCOCO2-201ENST00000258947 NUTM2GQ5VZR2 741 aa11.37□□□□□ -0.59
CALCOCO2-201ENST00000258947 TCP11L2Q8N4U5 519 aa11.37□□□□□ -0.59
CALCOCO2-201ENST00000258947 SPATA31D1Q6ZQQ2 1576 aa11.37□□□□□ -0.59
CALCOCO2-201ENST00000258947 NPC1L1Q9UHC9 1359 aa11.37□□□□□ -0.59
CALCOCO2-201ENST00000258947 RUNDC1Q96C34 613 aa11.37□□□□□ -0.59
CALCOCO2-201ENST00000258947 HMOX1P09601 288 aa11.36□□□□□ -0.59
CALCOCO2-201ENST00000258947 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
CALCOCO2-201ENST00000258947 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
CALCOCO2-201ENST00000258947 IFT172Q9UG01 1749 aa11.36□□□□□ -0.59
CALCOCO2-201ENST00000258947 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.36□□□□□ -0.59
CALCOCO2-201ENST00000258947 FRAT1Q92837 279 aaPredicted RBP11.36□□□□□ -0.59
CALCOCO2-201ENST00000258947 PPIP5K1Q6PFW1 1433 aa11.36□□□□□ -0.59
CALCOCO2-201ENST00000258947 NINLQ9Y2I6 1382 aa11.36□□□□□ -0.59
CALCOCO2-201ENST00000258947 RRP1P56182 461 aaKnown RBP11.36□□□□□ -0.59
CALCOCO2-201ENST00000258947 KCNA6P17658 529 aa11.35□□□□□ -0.59
CALCOCO2-201ENST00000258947 TULP4Q9NRJ4 1543 aa11.35□□□□□ -0.59
CALCOCO2-201ENST00000258947 ROBO2Q9HCK4 1378 aa11.34□□□□□ -0.59
CALCOCO2-201ENST00000258947 EMILIN1Q9Y6C2 1016 aa11.34□□□□□ -0.59
CALCOCO2-201ENST00000258947 PTPRMP28827 1452 aa11.34□□□□□ -0.59
CALCOCO2-201ENST00000258947 NLRP1Q9C000 1473 aa11.34□□□□□ -0.59
CALCOCO2-201ENST00000258947 TBX22Q9Y458 520 aa11.33□□□□□ -0.59
CALCOCO2-201ENST00000258947 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
CALCOCO2-201ENST00000258947 ACEP12821 1306 aa11.33□□□□□ -0.6
CALCOCO2-201ENST00000258947 NSD2O96028 1365 aa11.33□□□□□ -0.6
CALCOCO2-201ENST00000258947 EXOC6Q8TAG9 804 aa11.32□□□□□ -0.6
CALCOCO2-201ENST00000258947 PLEKHG1Q9ULL1 1385 aa11.32□□□□□ -0.6
CALCOCO2-201ENST00000258947 E9PSI1 815 aa11.32□□□□□ -0.6
CALCOCO2-201ENST00000258947 BCL2L13Q9BXK5 485 aa11.32□□□□□ -0.6
CALCOCO2-201ENST00000258947 PNNQ9H307 717 aaKnown RBP11.32□□□□□ -0.6
CALCOCO2-201ENST00000258947 POLR3AO14802 1390 aaPredicted RBP11.31□□□□□ -0.6
CALCOCO2-201ENST00000258947 AMPHP49418 695 aa11.31□□□□□ -0.6
CALCOCO2-201ENST00000258947 NLRP6P59044 892 aa11.31□□□□□ -0.6
CALCOCO2-201ENST00000258947 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
CALCOCO2-201ENST00000258947 LTV1Q96GA3 475 aaPredicted RBP11.31□□□□□ -0.6
CALCOCO2-201ENST00000258947 RIPK4P57078 832 aa11.31□□□□□ -0.6
CALCOCO2-201ENST00000258947 ESCO1Q5FWF5 840 aa11.31□□□□□ -0.6
CALCOCO2-201ENST00000258947 PRKAR2BP31323 418 aa11.3□□□□□ -0.6
CALCOCO2-201ENST00000258947 WWC1Q8IX03 1113 aa11.3□□□□□ -0.6
CALCOCO2-201ENST00000258947 PROSER2Q86WR7 435 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms