RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 QTRT2Q9H974 415 aaKnown RBP27.69■■■□□ 2.02
KHDC1-201ENST00000257765 KNDC1Q76NI1 1749 aa27.67■■■□□ 2.02
KHDC1-201ENST00000257765 NGLY1Q96IV0 654 aa27.67■■■□□ 2.02
KHDC1-201ENST00000257765 SPATA31E1Q6ZUB1 1445 aa27.67■■■□□ 2.02
KHDC1-201ENST00000257765 ADGRF5Q8IZF2 1346 aa27.67■■■□□ 2.02
KHDC1-201ENST00000257765 TECPR2O15040 1411 aa27.65■■■□□ 2.02
KHDC1-201ENST00000257765 ANKRD30BQ9BXX2 1392 aa27.64■■■□□ 2.02
KHDC1-201ENST00000257765 NPHP3Q7Z494 1330 aa27.63■■■□□ 2.01
KHDC1-201ENST00000257765 RGL3Q3MIN7 710 aa27.62■■■□□ 2.01
KHDC1-201ENST00000257765 MARF1Q9Y4F3 1742 aaKnown RBP27.61■■■□□ 2.01
KHDC1-201ENST00000257765 ESCO1Q5FWF5 840 aa27.61■■■□□ 2.01
KHDC1-201ENST00000257765 PXDNQ92626 1479 aa27.61■■■□□ 2.01
KHDC1-201ENST00000257765 LRPPRCP42704 1394 aaKnown RBP27.6■■■□□ 2.01
KHDC1-201ENST00000257765 MYOM2P54296 1465 aa27.6■■■□□ 2.01
KHDC1-201ENST00000257765 MPHOSPH9Q99550 1183 aa27.6■■■□□ 2.01
KHDC1-201ENST00000257765 USP21Q9UK80 565 aa27.59■■■□□ 2.01
KHDC1-201ENST00000257765 PIK3C2GO75747 1445 aa27.58■■■□□ 2.01
KHDC1-201ENST00000257765 STK26Q9P289 416 aa27.58■■■□□ 2.01
KHDC1-201ENST00000257765 FMN2Q9NZ56 1722 aa27.58■■■□□ 2.01
KHDC1-201ENST00000257765 ABCC11Q96J66 1382 aa27.57■■■□□ 2
KHDC1-201ENST00000257765 TRPC5Q9UL62 973 aaPredicted RBP27.56■■■□□ 2
KHDC1-201ENST00000257765 WAPLQ7Z5K2 1190 aa27.55■■■□□ 2
KHDC1-201ENST00000257765 FNBP4Q8N3X1 1017 aaPredicted RBP27.55■■■□□ 2
KHDC1-201ENST00000257765 KIF1AQ12756 1690 aa27.55■■■□□ 2
KHDC1-201ENST00000257765 ATRNO75882 1429 aa27.54■■■□□ 2
KHDC1-201ENST00000257765 PLEKHH1Q9ULM0 1364 aa27.53■■■□□ 2
KHDC1-201ENST00000257765 FOXO3O43524 673 aa27.53■■■□□ 2
KHDC1-201ENST00000257765 TMEM132EQ6IEE7 984 aa27.53■■■□□ 2
KHDC1-201ENST00000257765 YTHDC2Q9H6S0 1430 aaKnown RBP27.52■■■□□ 2
KHDC1-201ENST00000257765 XPCQ01831 940 aaPredicted RBP27.52■■■□□ 2
KHDC1-201ENST00000257765 ATAD2Q6PL18 1390 aa27.51■■□□□ 1.99
KHDC1-201ENST00000257765 NUTM2FA1L443 756 aa27.51■■□□□ 1.99
KHDC1-201ENST00000257765 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.47■■□□□ 1.99
KHDC1-201ENST00000257765 ACIN1Q9UKV3 1341 aaKnown RBP27.46■■□□□ 1.99
KHDC1-201ENST00000257765 BCL9LQ86UU0 1499 aa27.46■■□□□ 1.99
KHDC1-201ENST00000257765 RGPD8O14715 1765 aaPredicted RBP27.46■■□□□ 1.99
KHDC1-201ENST00000257765 NRXN1Q9ULB1 1477 aa27.45■■□□□ 1.99
KHDC1-201ENST00000257765 SIRT1Q96EB6 747 aa27.42■■□□□ 1.98
KHDC1-201ENST00000257765 C14orf93Q9H972 538 aaKnown RBP27.42■■□□□ 1.98
KHDC1-201ENST00000257765 SPATA31A3Q5VYP0 1347 aa27.41■■□□□ 1.98
KHDC1-201ENST00000257765 USP32Q8NFA0 1604 aa27.41■■□□□ 1.98
KHDC1-201ENST00000257765 DHX57Q6P158 1386 aaKnown RBP27.4■■□□□ 1.98
KHDC1-201ENST00000257765 SLIT2O94813 1529 aa27.37■■□□□ 1.97
KHDC1-201ENST00000257765 CFAP70Q5T0N1 1121 aa27.37■■□□□ 1.97
KHDC1-201ENST00000257765 TNS3Q68CZ2 1445 aa27.36■■□□□ 1.97
KHDC1-201ENST00000257765 KRT28Q7Z3Y7 464 aa27.36■■□□□ 1.97
KHDC1-201ENST00000257765 GJD4Q96KN9 370 aaPredicted RBP27.36■■□□□ 1.97
KHDC1-201ENST00000257765 PHF8Q9UPP1 1060 aa27.35■■□□□ 1.97
KHDC1-201ENST00000257765 ABCA3Q99758 1704 aa27.35■■□□□ 1.97
KHDC1-201ENST00000257765 DLC1Q96QB1 1528 aa27.35■■□□□ 1.97
KHDC1-201ENST00000257765 GLI3P10071 1580 aa27.35■■□□□ 1.97
KHDC1-201ENST00000257765 ADGRB2O60241 1585 aa27.32■■□□□ 1.96
KHDC1-201ENST00000257765 UNC5CLQ8IV45 518 aa27.32■■□□□ 1.96
KHDC1-201ENST00000257765 PRAM1Q96QH2 718 aa27.32■■□□□ 1.96
KHDC1-201ENST00000257765 PLCH1Q4KWH8 1693 aa27.32■■□□□ 1.96
KHDC1-201ENST00000257765 RALGAPBQ86X10 1494 aa27.32■■□□□ 1.96
KHDC1-201ENST00000257765 PSME1Q06323 249 aa27.31■■□□□ 1.96
KHDC1-201ENST00000257765 RAB3GAP2Q9H2M9 1393 aa27.31■■□□□ 1.96
KHDC1-201ENST00000257765 NWD2Q9ULI1 1742 aa27.3■■□□□ 1.96
KHDC1-201ENST00000257765 SAFB2Q14151 953 aaKnown RBP eCLIP27.3■■□□□ 1.96
KHDC1-201ENST00000257765 EP400Q96L91 3159 aa27.3■■□□□ 1.96
KHDC1-201ENST00000257765 HAP1P54257 671 aaPredicted RBP27.29■■□□□ 1.96
KHDC1-201ENST00000257765 SBNO1A3KN83 1393 aa27.29■■□□□ 1.96
KHDC1-201ENST00000257765 ANKARQ7Z5J8 1434 aa27.29■■□□□ 1.96
KHDC1-201ENST00000257765 ADGRB1O14514 1584 aa27.29■■□□□ 1.96
KHDC1-201ENST00000257765 BRWD3Q6RI45 1802 aa27.27■■□□□ 1.96
KHDC1-201ENST00000257765 CCDC125Q86Z20 511 aa27.27■■□□□ 1.96
KHDC1-201ENST00000257765 ARHGEF10O15013 1369 aa27.26■■□□□ 1.95
KHDC1-201ENST00000257765 POGKQ9P215 609 aa27.26■■□□□ 1.95
KHDC1-201ENST00000257765 TRPM3Q9HCF6 1732 aaPredicted RBP27.24■■□□□ 1.95
KHDC1-201ENST00000257765 CABLES1Q8TDN4 633 aa27.23■■□□□ 1.95
KHDC1-201ENST00000257765 LMOD2Q6P5Q4 547 aa27.22■■□□□ 1.95
KHDC1-201ENST00000257765 PLEKHG5O94827 1062 aa27.21■■□□□ 1.95
KHDC1-201ENST00000257765 ZRANB1Q9UGI0 708 aa27.21■■□□□ 1.95
KHDC1-201ENST00000257765 PMFBP1Q8TBY8 1022 aa27.2■■□□□ 1.94
KHDC1-201ENST00000257765 EIF3AQ14152 1382 aaKnown RBP27.2■■□□□ 1.94
KHDC1-201ENST00000257765 VPS72Q15906 364 aa27.19■■□□□ 1.94
KHDC1-201ENST00000257765 ALS2Q96Q42 1657 aa27.19■■□□□ 1.94
KHDC1-201ENST00000257765 TULP4Q9NRJ4 1543 aa27.19■■□□□ 1.94
KHDC1-201ENST00000257765 BLMP54132 1417 aaPredicted RBP27.18■■□□□ 1.94
KHDC1-201ENST00000257765 TRAK1Q9UPV9 953 aa27.18■■□□□ 1.94
KHDC1-201ENST00000257765 NRAPQ86VF7 1730 aa27.17■■□□□ 1.94
KHDC1-201ENST00000257765 HIRIP3Q9BW71 556 aaPredicted RBP27.16■■□□□ 1.94
KHDC1-201ENST00000257765 SEPT12Q8IYM1 358 aa27.15■■□□□ 1.94
KHDC1-201ENST00000257765 CCDC9Q9Y3X0 531 aaKnown RBP27.15■■□□□ 1.94
KHDC1-201ENST00000257765 MINK1Q8N4C8 1332 aaPredicted RBP27.15■■□□□ 1.94
KHDC1-201ENST00000257765 ARHGEF28Q8N1W1 1705 aaKnown RBP27.14■■□□□ 1.94
KHDC1-201ENST00000257765 KDM2AQ9Y2K7 1162 aa27.14■■□□□ 1.94
KHDC1-201ENST00000257765 GPRASP1Q5JY77 1395 aa27.13■■□□□ 1.93
KHDC1-201ENST00000257765 DCAF11Q8TEB1 546 aa27.13■■□□□ 1.93
KHDC1-201ENST00000257765 PRR36Q9H6K5 1346 aa27.13■■□□□ 1.93
KHDC1-201ENST00000257765 ITSN1Q15811 1721 aa27.13■■□□□ 1.93
KHDC1-201ENST00000257765 COL14A1Q05707 1796 aaKnown RBP27.12■■□□□ 1.93
KHDC1-201ENST00000257765 CRYBG1Q9Y4K1 1723 aa27.12■■□□□ 1.93
KHDC1-201ENST00000257765 FAM83GA6ND36 823 aa27.1■■□□□ 1.93
KHDC1-201ENST00000257765 STAC3Q96MF2 364 aa27.1■■□□□ 1.93
KHDC1-201ENST00000257765 WASLO00401 505 aaPredicted RBP27.09■■□□□ 1.93
KHDC1-201ENST00000257765 ONECUT3O60422 494 aaPredicted RBP27.09■■□□□ 1.93
KHDC1-201ENST00000257765 SRCAPQ6ZRS2 3230 aa27.07■■□□□ 1.92
KHDC1-201ENST00000257765 SF3B2Q13435 895 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms