RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 PIK3C2GO75747 1445 aa17.21■□□□□ 0.35
VHL-201ENST00000256474 MLECQ14165 292 aa17.21■□□□□ 0.35
VHL-201ENST00000256474 TRMT2AQ8IZ69 625 aaKnown RBP17.21■□□□□ 0.35
VHL-201ENST00000256474 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
VHL-201ENST00000256474 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
VHL-201ENST00000256474 MYH16Q9H6N6 1097 aa17.2■□□□□ 0.34
VHL-201ENST00000256474 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
VHL-201ENST00000256474 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
VHL-201ENST00000256474 DZIP1LQ8IYY4 767 aaKnown RBP17.19■□□□□ 0.34
VHL-201ENST00000256474 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
VHL-201ENST00000256474 ZKSCAN2Q63HK3 967 aa17.18■□□□□ 0.34
VHL-201ENST00000256474 EVC2Q86UK5 1308 aa17.18■□□□□ 0.34
VHL-201ENST00000256474 HMOX1P09601 288 aa17.18■□□□□ 0.34
VHL-201ENST00000256474 THUMPD2Q9BTF0 503 aaKnown RBP17.18■□□□□ 0.34
VHL-201ENST00000256474 SLC24A1O60721 1099 aa17.18■□□□□ 0.34
VHL-201ENST00000256474 RIPK4P57078 832 aa17.18■□□□□ 0.34
VHL-201ENST00000256474 STAC3Q96MF2 364 aa17.18■□□□□ 0.34
VHL-201ENST00000256474 SOX12O15370 315 aa17.17■□□□□ 0.34
VHL-201ENST00000256474 CLTCL1P53675 1640 aa17.16■□□□□ 0.34
VHL-201ENST00000256474 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
VHL-201ENST00000256474 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
VHL-201ENST00000256474 PRAM1Q96QH2 718 aa17.15■□□□□ 0.34
VHL-201ENST00000256474 NOB1Q9ULX3 412 aaKnown RBP17.15■□□□□ 0.34
VHL-201ENST00000256474 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
VHL-201ENST00000256474 ABCC1P33527 1531 aa17.15■□□□□ 0.34
VHL-201ENST00000256474 SSH1Q8WYL5 1049 aa17.14■□□□□ 0.34
VHL-201ENST00000256474 C14orf93Q9H972 538 aaKnown RBP17.14■□□□□ 0.33
VHL-201ENST00000256474 NUTM2FA1L443 756 aa17.14■□□□□ 0.33
VHL-201ENST00000256474 APBB1O00213 710 aa17.13■□□□□ 0.33
VHL-201ENST00000256474 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
VHL-201ENST00000256474 PLXNC1O60486 1568 aa17.13■□□□□ 0.33
VHL-201ENST00000256474 VGFO15240 615 aaPredicted RBP17.12■□□□□ 0.33
VHL-201ENST00000256474 IDI1Q13907 227 aa17.12■□□□□ 0.33
VHL-201ENST00000256474 MVPQ14764 893 aaKnown RBP17.12■□□□□ 0.33
VHL-201ENST00000256474 ZCCHC11Q5TAX3 1644 aaKnown RBP17.12■□□□□ 0.33
VHL-201ENST00000256474 TRIM27P14373 513 aa17.11■□□□□ 0.33
VHL-201ENST00000256474 TRPM2O94759 1503 aa17.11■□□□□ 0.33
VHL-201ENST00000256474 USP19O94966 1318 aa17.11■□□□□ 0.33
VHL-201ENST00000256474 TMPOP42166 694 aaKnown RBP17.11■□□□□ 0.33
VHL-201ENST00000256474 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
VHL-201ENST00000256474 TBC1D2Q9BYX2 928 aa17.1■□□□□ 0.33
VHL-201ENST00000256474 CABP1Q9NZU7 370 aa17.1■□□□□ 0.33
VHL-201ENST00000256474 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
VHL-201ENST00000256474 PTPRTO14522 1441 aa17.1■□□□□ 0.33
VHL-201ENST00000256474 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
VHL-201ENST00000256474 INSRP06213 1382 aa17.1■□□□□ 0.33
VHL-201ENST00000256474 ATP7AQ04656 1500 aa17.1■□□□□ 0.33
VHL-201ENST00000256474 FBXO31Q5XUX0 539 aaPredicted RBP17.09■□□□□ 0.33
VHL-201ENST00000256474 SYNMO15061 1565 aa17.09■□□□□ 0.33
VHL-201ENST00000256474 C22orf23Q9BZE7 217 aa17.08■□□□□ 0.33
VHL-201ENST00000256474 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.33
VHL-201ENST00000256474 DIAPH1O60610 1272 aaKnown RBP17.07■□□□□ 0.32
VHL-201ENST00000256474 WAPLQ7Z5K2 1190 aa17.07■□□□□ 0.32
VHL-201ENST00000256474 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
VHL-201ENST00000256474 ASXL2Q76L83 1435 aa17.07■□□□□ 0.32
VHL-201ENST00000256474 PRKAR2BP31323 418 aa17.07■□□□□ 0.32
VHL-201ENST00000256474 ANKRD45Q5TZF3 282 aa17.07■□□□□ 0.32
VHL-201ENST00000256474 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
VHL-201ENST00000256474 RTEL1-TNFRSF6BF6WH68 1400 aa17.06■□□□□ 0.32
VHL-201ENST00000256474 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
VHL-201ENST00000256474 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
VHL-201ENST00000256474 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
VHL-201ENST00000256474 ATF7IPQ6VMQ6 1270 aa17.05■□□□□ 0.32
VHL-201ENST00000256474 FYB1O15117 783 aa17.04■□□□□ 0.32
VHL-201ENST00000256474 HSCBQ8IWL3 235 aa17.03■□□□□ 0.32
VHL-201ENST00000256474 TBC1D32Q96NH3 1257 aa17.03■□□□□ 0.32
VHL-201ENST00000256474 CDK19Q9BWU1 502 aa17.03■□□□□ 0.32
VHL-201ENST00000256474 DDX19BQ9UMR2 479 aa17.03■□□□□ 0.32
VHL-201ENST00000256474 NPATQ14207 1427 aa17.03■□□□□ 0.32
VHL-201ENST00000256474 LAMC1P11047 1609 aa17.03■□□□□ 0.32
VHL-201ENST00000256474 DCTN1Q14203 1278 aa17.03■□□□□ 0.32
VHL-201ENST00000256474 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
VHL-201ENST00000256474 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.32
VHL-201ENST00000256474 SPHKAPQ2M3C7 1700 aa17.02■□□□□ 0.32
VHL-201ENST00000256474 TRIM35Q9UPQ4 493 aa17.02■□□□□ 0.31
VHL-201ENST00000256474 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
VHL-201ENST00000256474 IQGAP1P46940 1657 aa17.01■□□□□ 0.31
VHL-201ENST00000256474 RNF17Q9BXT8 1623 aaKnown RBP17.01■□□□□ 0.31
VHL-201ENST00000256474 CD109Q6YHK3 1445 aa17.01■□□□□ 0.31
VHL-201ENST00000256474 A0A1W2PP64 1363 aa17.01■□□□□ 0.31
VHL-201ENST00000256474 ABCA6Q8N139 1617 aa17■□□□□ 0.31
VHL-201ENST00000256474 NCKAP5LQ9HCH0 1330 aa17■□□□□ 0.31
VHL-201ENST00000256474 EMILIN1Q9Y6C2 1016 aa17■□□□□ 0.31
VHL-201ENST00000256474 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
VHL-201ENST00000256474 IPO8O15397 1037 aaKnown RBP16.99■□□□□ 0.31
VHL-201ENST00000256474 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
VHL-201ENST00000256474 FAM83GA6ND36 823 aa16.98■□□□□ 0.31
VHL-201ENST00000256474 TSPYL6Q8N831 410 aa16.98■□□□□ 0.31
VHL-201ENST00000256474 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
VHL-201ENST00000256474 MAP3K4Q9Y6R4 1608 aa16.96■□□□□ 0.31
VHL-201ENST00000256474 ANKRD36BQ8N2N9 1353 aa16.96■□□□□ 0.31
VHL-201ENST00000256474 PANK2Q9BZ23 570 aa16.96■□□□□ 0.31
VHL-201ENST00000256474 NINLQ9Y2I6 1382 aa16.95■□□□□ 0.3
VHL-201ENST00000256474 MYOM1P52179 1685 aa16.95■□□□□ 0.3
VHL-201ENST00000256474 NME9Q86XW9 330 aa16.95■□□□□ 0.3
VHL-201ENST00000256474 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
VHL-201ENST00000256474 TET3O43151 1660 aa16.94■□□□□ 0.3
VHL-201ENST00000256474 GOLGA6L3A6NEY3 463 aa16.94■□□□□ 0.3
VHL-201ENST00000256474 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
VHL-201ENST00000256474 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms